RNA–Protein interactions for RNA: ENST00000564313.1

PKD1-227, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-227ENST00000564313 TMED8Q6PL24 325 aaPredicted RBP22.29■■□□□ 1.16
PKD1-227ENST00000564313 FAM163AQ96GL9 167 aaPredicted RBP22.29■■□□□ 1.16
PKD1-227ENST00000564313 GPATCH3Q96I76 525 aa22.29■■□□□ 1.16
PKD1-227ENST00000564313 ZIC5Q96T25 663 aa22.29■■□□□ 1.16
PKD1-227ENST00000564313 VEZTQ9HBM0 779 aa22.29■■□□□ 1.16
PKD1-227ENST00000564313 SNRKQ9NRH2 765 aa22.29■■□□□ 1.16
PKD1-227ENST00000564313 ZNF70Q9UC06 446 aaPredicted RBP22.29■■□□□ 1.16
PKD1-227ENST00000564313 DAGLAQ9Y4D2 1042 aa22.29■■□□□ 1.16
PKD1-227ENST00000564313 MAST2Q6P0Q8 1798 aa22.29■■□□□ 1.16
PKD1-227ENST00000564313 MYH2Q9UKX2 1941 aa22.29■■□□□ 1.16
PKD1-227ENST00000564313 CLRN2A0PK11 232 aa22.28■■□□□ 1.16
PKD1-227ENST00000564313 SMARCA5O60264 1052 aaPredicted RBP22.28■■□□□ 1.16
PKD1-227ENST00000564313 CYP2E1P05181 493 aaPredicted RBP22.28■■□□□ 1.16
PKD1-227ENST00000564313 LDHCP07864 332 aa22.28■■□□□ 1.16
PKD1-227ENST00000564313 ZAP70P43403 619 aa22.28■■□□□ 1.16
PKD1-227ENST00000564313 TNNI2P48788 182 aa22.28■■□□□ 1.16
PKD1-227ENST00000564313 TTF1Q15361 905 aaPredicted RBP22.28■■□□□ 1.16
PKD1-227ENST00000564313 DIXDC1Q155Q3 683 aa22.28■■□□□ 1.16
PKD1-227ENST00000564313 APOBEC3HQ6NTF7 200 aaKnown RBP22.28■■□□□ 1.16
PKD1-227ENST00000564313 CDCA5Q96FF9 252 aa22.28■■□□□ 1.16
PKD1-227ENST00000564313 TDRD3Q9H7E2 651 aaKnown RBP22.28■■□□□ 1.16
PKD1-227ENST00000564313 RAI14Q9P0K7 980 aa22.28■■□□□ 1.16
PKD1-227ENST00000564313 GAKO14976 1311 aa22.28■■□□□ 1.16
PKD1-227ENST00000564313 NF2P35240 595 aa22.27■■□□□ 1.16
PKD1-227ENST00000564313 MECOMQ03112 1051 aa22.27■■□□□ 1.16
PKD1-227ENST00000564313 FKBP1CQ5VVH2 108 aa22.27■■□□□ 1.16
PKD1-227ENST00000564313 TBC1D9Q6ZT07 1266 aa22.27■■□□□ 1.16
PKD1-227ENST00000564313 BCL11AQ9H165 835 aa22.27■■□□□ 1.16
PKD1-227ENST00000564313 DEFB129Q9H1M3 183 aa22.27■■□□□ 1.16
PKD1-227ENST00000564313 ATP5JP18859 108 aa22.26■■□□□ 1.15
PKD1-227ENST00000564313 FKBP1BP68106 108 aa22.26■■□□□ 1.15
PKD1-227ENST00000564313 NSUN4Q96CB9 384 aaKnown RBP22.26■■□□□ 1.15
PKD1-227ENST00000564313 MROH7-TTC4A0A0A0MT08 1334 aa22.26■■□□□ 1.15
PKD1-227ENST00000564313 IRX6P78412 446 aaPredicted RBP22.25■■□□□ 1.15
PKD1-227ENST00000564313 C2orf69Q8N8R5 385 aa22.25■■□□□ 1.15
PKD1-227ENST00000564313 ECHDC1Q9NTX5 307 aa22.25■■□□□ 1.15
PKD1-227ENST00000564313 AOX1Q06278 1338 aa22.25■■□□□ 1.15
PKD1-227ENST00000564313 MAP4K4O95819 1239 aaPredicted RBP22.24■■□□□ 1.15
PKD1-227ENST00000564313 NOGQ13253 232 aa22.24■■□□□ 1.15
PKD1-227ENST00000564313 PRPF38BQ5VTL8 546 aaKnown RBP22.24■■□□□ 1.15
PKD1-227ENST00000564313 PRAMEF18Q5VWM3 479 aa22.24■■□□□ 1.15
PKD1-227ENST00000564313 GBA2Q9HCG7 927 aaPredicted RBP22.24■■□□□ 1.15
PKD1-227ENST00000564313 DOCK2Q92608 1830 aa22.24■■□□□ 1.15
PKD1-227ENST00000564313 PAPPA2Q9BXP8 1791 aa22.23■■□□□ 1.15
PKD1-227ENST00000564313 MAP3K12Q12852 859 aa22.23■■□□□ 1.15
PKD1-227ENST00000564313 SUPT20HL1Q3ZLR7 823 aa22.23■■□□□ 1.15
PKD1-227ENST00000564313 NAA16Q6N069 864 aaPredicted RBP22.23■■□□□ 1.15
PKD1-227ENST00000564313 FAM83AQ86UY5 434 aa22.23■■□□□ 1.15
PKD1-227ENST00000564313 SMC5Q8IY18 1101 aa22.23■■□□□ 1.15
PKD1-227ENST00000564313 NOL10Q9BSC4 688 aaKnown RBP22.23■■□□□ 1.15
PKD1-227ENST00000564313 GPR75-ASB3A0A0A6YYF3 556 aa22.22■■□□□ 1.15
PKD1-227ENST00000564313 CENPBP07199 599 aaPredicted RBP22.22■■□□□ 1.15
PKD1-227ENST00000564313 RASA3Q14644 834 aa22.22■■□□□ 1.15
PKD1-227ENST00000564313 ANKRD45Q5TZF3 282 aa22.22■■□□□ 1.15
PKD1-227ENST00000564313 CDC42EP5Q6NZY7 148 aa22.22■■□□□ 1.15
PKD1-227ENST00000564313 DNAJC2Q99543 621 aaKnown RBP22.22■■□□□ 1.15
PKD1-227ENST00000564313 HAUS7Q99871 368 aa22.22■■□□□ 1.15
PKD1-227ENST00000564313 PIH1D3Q9NQM4 214 aaKnown RBP22.22■■□□□ 1.15
PKD1-227ENST00000564313 TTC41PQ6P2S7 1318 aa22.22■■□□□ 1.15
PKD1-227ENST00000564313 RPAP1Q9BWH6 1393 aaPredicted RBP22.22■■□□□ 1.15
PKD1-227ENST00000564313 TCP10L2B9ZVM9 353 aa22.21■■□□□ 1.15
PKD1-227ENST00000564313 ERC2O15083 957 aa22.21■■□□□ 1.15
PKD1-227ENST00000564313 IDH1O75874 414 aaKnown RBP22.21■■□□□ 1.15
PKD1-227ENST00000564313 BTDP43251 543 aa22.21■■□□□ 1.15
PKD1-227ENST00000564313 CERS3Q8IU89 383 aa22.21■■□□□ 1.15
PKD1-227ENST00000564313 USP40Q9NVE5 1235 aa22.21■■□□□ 1.15
PKD1-227ENST00000564313 BAG3O95817 575 aa22.2■■□□□ 1.14
PKD1-227ENST00000564313 PLCG2P16885 1265 aa22.2■■□□□ 1.14
PKD1-227ENST00000564313 HUNKP57058 714 aa22.2■■□□□ 1.14
PKD1-227ENST00000564313 ZNF384Q8TF68 577 aa22.2■■□□□ 1.14
PKD1-227ENST00000564313 HOOK2Q96ED9 719 aa22.2■■□□□ 1.14
PKD1-227ENST00000564313 BOLA2Q9H3K6 86 aa22.2■■□□□ 1.14
PKD1-227ENST00000564313 PAG1Q9NWQ8 432 aa22.2■■□□□ 1.14
PKD1-227ENST00000564313 MYO5AQ9Y4I1 1855 aaKnown RBP22.2■■□□□ 1.14
PKD1-227ENST00000564313 GOLIM4O00461 696 aa22.19■■□□□ 1.14
PKD1-227ENST00000564313 IDI2Q9BXS1 227 aa22.19■■□□□ 1.14
PKD1-227ENST00000564313 ANTXR1Q9H6X2 564 aa22.19■■□□□ 1.14
PKD1-227ENST00000564313 NDUFB9Q9Y6M9 179 aa22.19■■□□□ 1.14
PKD1-227ENST00000564313 IGHDP01880 384 aa22.18■■□□□ 1.14
PKD1-227ENST00000564313 MX1P20591 662 aa22.18■■□□□ 1.14
PKD1-227ENST00000564313 ARMC9Q7Z3E5 817 aa22.18■■□□□ 1.14
PKD1-227ENST00000564313 PPP1R12BO60237 982 aaPredicted RBP22.17■■□□□ 1.14
PKD1-227ENST00000564313 CACNB3P54284 484 aa22.17■■□□□ 1.14
PKD1-227ENST00000564313 FAM151AQ8WW52 585 aa22.17■■□□□ 1.14
PKD1-227ENST00000564313 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.17■■□□□ 1.149e-7■■■■□ 23.6
PKD1-227ENST00000564313 RFX7Q2KHR2 1363 aa22.16■■□□□ 1.14
PKD1-227ENST00000564313 FAM155AB1AL88 458 aaPredicted RBP22.16■■□□□ 1.14
PKD1-227ENST00000564313 ENTPD3O75355 529 aa22.16■■□□□ 1.14
PKD1-227ENST00000564313 NPM3O75607 178 aaKnown RBP22.16■■□□□ 1.14
PKD1-227ENST00000564313 GLRX3O76003 335 aaKnown RBP22.16■■□□□ 1.14
PKD1-227ENST00000564313 CYP7A1P22680 504 aa22.16■■□□□ 1.14
PKD1-227ENST00000564313 PPP4CP60510 307 aa22.16■■□□□ 1.14
PKD1-227ENST00000564313 TTLL12Q14166 644 aaPredicted RBP22.16■■□□□ 1.14
PKD1-227ENST00000564313 MAGEB6Q8N7X4 407 aa22.16■■□□□ 1.14
PKD1-227ENST00000564313 TEPSINQ96N21 525 aa22.16■■□□□ 1.14
PKD1-227ENST00000564313 TMEM39BQ9GZU3 492 aa22.16■■□□□ 1.14
PKD1-227ENST00000564313 SAGE1Q9NXZ1 904 aa22.16■■□□□ 1.14
PKD1-227ENST00000564313 UNCXA6NJT0 531 aa22.15■■□□□ 1.14
PKD1-227ENST00000564313 RHBDL3P58872 404 aa22.15■■□□□ 1.14
PKD1-227ENST00000564313 NUCB1Q02818 461 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms