RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 RPAP1Q9BWH6 1393 aaPredicted RBP24.62■■□□□ 1.53
SHCBP1-203ENST00000564272 ZBTB48P10074 688 aaPredicted RBP24.61■■□□□ 1.53
SHCBP1-203ENST00000564272 ARID4AP29374 1257 aaPredicted RBP24.61■■□□□ 1.53
SHCBP1-203ENST00000564272 NFIAQ12857 509 aa24.61■■□□□ 1.53
SHCBP1-203ENST00000564272 TNNI3KQ59H18 835 aa24.61■■□□□ 1.53
SHCBP1-203ENST00000564272 ELP3Q9H9T3 547 aa24.61■■□□□ 1.53
SHCBP1-203ENST00000564272 FPGT-TNNI3KV9GXZ4 949 aa24.61■■□□□ 1.53
SHCBP1-203ENST00000564272 LAMB1P07942 1786 aa24.61■■□□□ 1.53
SHCBP1-203ENST00000564272 MS4A1P11836 297 aa24.6■■□□□ 1.53
SHCBP1-203ENST00000564272 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.6■■□□□ 1.53
SHCBP1-203ENST00000564272 SPATA5Q8NB90 893 aa24.6■■□□□ 1.53
SHCBP1-203ENST00000564272 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.6■■□□□ 1.53
SHCBP1-203ENST00000564272 ABHD8Q96I13 439 aa24.6■■□□□ 1.53
SHCBP1-203ENST00000564272 DBNDD2Q9BQY9 259 aa24.6■■□□□ 1.53
SHCBP1-203ENST00000564272 GPR108Q9NPR9 543 aa24.6■■□□□ 1.53
SHCBP1-203ENST00000564272 USP40Q9NVE5 1235 aa24.6■■□□□ 1.53
SHCBP1-203ENST00000564272 NOP58Q9Y2X3 529 aaKnown RBP24.6■■□□□ 1.53
SHCBP1-203ENST00000564272 GAKO14976 1311 aa24.6■■□□□ 1.53
SHCBP1-203ENST00000564272 TBC1D8O95759 1140 aa24.59■■□□□ 1.53
SHCBP1-203ENST00000564272 MCAMP43121 646 aa24.59■■□□□ 1.53
SHCBP1-203ENST00000564272 TCP10Q12799 353 aa24.59■■□□□ 1.53
SHCBP1-203ENST00000564272 SPTY2D1Q68D10 685 aaPredicted RBP24.59■■□□□ 1.53
SHCBP1-203ENST00000564272 COG6Q9Y2V7 657 aa24.59■■□□□ 1.53
SHCBP1-203ENST00000564272 MANSC4A6NHS7 340 aaPredicted RBP24.58■■□□□ 1.53
SHCBP1-203ENST00000564272 VGLL4Q14135 290 aa24.58■■□□□ 1.53
SHCBP1-203ENST00000564272 TBC1D9Q6ZT07 1266 aa24.58■■□□□ 1.53
SHCBP1-203ENST00000564272 FAM151AQ8WW52 585 aa24.58■■□□□ 1.53
SHCBP1-203ENST00000564272 MCOLN1Q9GZU1 580 aa24.58■■□□□ 1.53
SHCBP1-203ENST00000564272 FAM198AQ9UFP1 575 aa24.58■■□□□ 1.53
SHCBP1-203ENST00000564272 UQCRFS1P1P0C7P4 283 aa24.57■■□□□ 1.52
SHCBP1-203ENST00000564272 MAP3K9P80192 1104 aa24.57■■□□□ 1.52
SHCBP1-203ENST00000564272 MECOMQ03112 1051 aa24.57■■□□□ 1.52
SHCBP1-203ENST00000564272 ERICH6Q7L0X2 663 aa24.57■■□□□ 1.52
SHCBP1-203ENST00000564272 ZNF384Q8TF68 577 aa24.57■■□□□ 1.52
SHCBP1-203ENST00000564272 CNKSR2Q8WXI2 1034 aa24.57■■□□□ 1.52
SHCBP1-203ENST00000564272 OPTNQ96CV9 577 aa24.57■■□□□ 1.52
SHCBP1-203ENST00000564272 RFX7Q2KHR2 1363 aa24.56■■□□□ 1.52
SHCBP1-203ENST00000564272 DGKZQ13574 1117 aa24.56■■□□□ 1.52
SHCBP1-203ENST00000564272 TTC39AQ5SRH9 613 aa24.56■■□□□ 1.52
SHCBP1-203ENST00000564272 EXOC6BQ9Y2D4 811 aa24.56■■□□□ 1.52
SHCBP1-203ENST00000564272 MROH7-TTC4A0A0A0MT08 1334 aa24.56■■□□□ 1.52
SHCBP1-203ENST00000564272 BTDP43251 543 aa24.55■■□□□ 1.52
SHCBP1-203ENST00000564272 MIGA2Q7L4E1 593 aa24.55■■□□□ 1.52
SHCBP1-203ENST00000564272 IFNL1Q8IU54 200 aa24.55■■□□□ 1.52
SHCBP1-203ENST00000564272 ZFPM1Q8IX07 1006 aa24.55■■□□□ 1.52
SHCBP1-203ENST00000564272 SLF2Q8IX21 1173 aa24.55■■□□□ 1.52
SHCBP1-203ENST00000564272 HOOK2Q96ED9 719 aa24.55■■□□□ 1.52
SHCBP1-203ENST00000564272 WRNIP1Q96S55 665 aa24.55■■□□□ 1.52
SHCBP1-203ENST00000564272 SNRKQ9NRH2 765 aa24.55■■□□□ 1.52
SHCBP1-203ENST00000564272 TLR7Q9NYK1 1049 aaKnown RBP24.55■■□□□ 1.52
SHCBP1-203ENST00000564272 DDX19BQ9UMR2 479 aa24.55■■□□□ 1.52
SHCBP1-203ENST00000564272 CSADQ9Y600 493 aa24.55■■□□□ 1.52
SHCBP1-203ENST00000564272 AK9Q5TCS8 1911 aa24.55■■□□□ 1.52
SHCBP1-203ENST00000564272 IGF2BP3O00425 579 aaKnown RBP eCLIP24.54■■□□□ 1.52
SHCBP1-203ENST00000564272 DCAF15Q66K64 600 aa24.54■■□□□ 1.52
SHCBP1-203ENST00000564272 FAM163AQ96GL9 167 aaPredicted RBP24.54■■□□□ 1.52
SHCBP1-203ENST00000564272 R3HDMLQ9H3Y0 253 aa24.54■■□□□ 1.52
SHCBP1-203ENST00000564272 RAI14Q9P0K7 980 aa24.54■■□□□ 1.52
SHCBP1-203ENST00000564272 DBNLQ9UJU6 430 aaKnown RBP24.54■■□□□ 1.52
SHCBP1-203ENST00000564272 SNCAIPQ9Y6H5 919 aa24.54■■□□□ 1.52
SHCBP1-203ENST00000564272 RGS3P49796 1198 aa24.53■■□□□ 1.52
SHCBP1-203ENST00000564272 CCDC158Q5M9N0 1113 aa24.53■■□□□ 1.52
SHCBP1-203ENST00000564272 ZKSCAN4Q969J2 545 aaPredicted RBP24.53■■□□□ 1.52
SHCBP1-203ENST00000564272 NSUN4Q96CB9 384 aaKnown RBP24.53■■□□□ 1.52
SHCBP1-203ENST00000564272 OTUD5Q96G74 571 aa24.53■■□□□ 1.52
SHCBP1-203ENST00000564272 CCDC8Q9H0W5 538 aaPredicted RBP24.53■■□□□ 1.52
SHCBP1-203ENST00000564272 DOCK2Q92608 1830 aa24.53■■□□□ 1.52
SHCBP1-203ENST00000564272 MAST2Q6P0Q8 1798 aa24.52■■□□□ 1.52
SHCBP1-203ENST00000564272 INHBEP58166 350 aa24.52■■□□□ 1.52
SHCBP1-203ENST00000564272 C20orf194Q5TEA3 1177 aa24.52■■□□□ 1.52
SHCBP1-203ENST00000564272 ZNF296Q8WUU4 475 aaPredicted RBP24.52■■□□□ 1.52
SHCBP1-203ENST00000564272 EAF2Q96CJ1 260 aaPredicted RBP24.52■■□□□ 1.52
SHCBP1-203ENST00000564272 IDI2Q9BXS1 227 aa24.52■■□□□ 1.52
SHCBP1-203ENST00000564272 ZNF341Q9BYN7 854 aa24.52■■□□□ 1.52
SHCBP1-203ENST00000564272 ZBTB40Q9NUA8 1239 aa24.52■■□□□ 1.52
SHCBP1-203ENST00000564272 WDHD1O75717 1129 aaPredicted RBP24.51■■□□□ 1.51
SHCBP1-203ENST00000564272 CFHR5Q9BXR6 569 aa24.51■■□□□ 1.51
SHCBP1-203ENST00000564272 DDX4Q9NQI0 724 aaKnown RBP24.51■■□□□ 1.51
SHCBP1-203ENST00000564272 GPR75-ASB3A0A0A6YYF3 556 aa24.5■■□□□ 1.51
SHCBP1-203ENST00000564272 SPDYE5A6NIY4 337 aa24.5■■□□□ 1.51
SHCBP1-203ENST00000564272 GPR25O00155 361 aa24.5■■□□□ 1.51
SHCBP1-203ENST00000564272 ALDH1A1P00352 501 aa24.5■■□□□ 1.51
SHCBP1-203ENST00000564272 INPP5BP32019 993 aa24.5■■□□□ 1.51
SHCBP1-203ENST00000564272 PICALMQ13492 652 aa24.5■■□□□ 1.51
SHCBP1-203ENST00000564272 MS4A4AQ96JQ5 239 aa24.5■■□□□ 1.51
SHCBP1-203ENST00000564272 LRP2BPQ9P2M1 347 aa24.5■■□□□ 1.51
SHCBP1-203ENST00000564272 ENTPD3O75355 529 aa24.49■■□□□ 1.51
SHCBP1-203ENST00000564272 RHBDL3P58872 404 aa24.49■■□□□ 1.51
SHCBP1-203ENST00000564272 GSTO1P78417 241 aa24.49■■□□□ 1.51
SHCBP1-203ENST00000564272 SH3BP5LQ7L8J4 393 aa24.49■■□□□ 1.51
SHCBP1-203ENST00000564272 ERC1Q8IUD2 1116 aa24.49■■□□□ 1.51
SHCBP1-203ENST00000564272 SIRT2Q8IXJ6 389 aa24.49■■□□□ 1.51
SHCBP1-203ENST00000564272 PTPN18Q99952 460 aa24.49■■□□□ 1.51
SHCBP1-203ENST00000564272 ATRNL1Q5VV63 1379 aa24.49■■□□□ 1.51
SHCBP1-203ENST00000564272 TESPA1A2RU30 521 aaPredicted RBP24.48■■□□□ 1.51
SHCBP1-203ENST00000564272 CYP2E1P05181 493 aaPredicted RBP24.48■■□□□ 1.51
SHCBP1-203ENST00000564272 ZAP70P43403 619 aa24.48■■□□□ 1.51
SHCBP1-203ENST00000564272 CTU1Q7Z7A3 348 aaKnown RBP24.48■■□□□ 1.51
SHCBP1-203ENST00000564272 BRI3BPQ8WY22 251 aa24.48■■□□□ 1.51
SHCBP1-203ENST00000564272 ZNF512BQ96KM6 892 aaPredicted RBP24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms