RNA–Protein interactions for RNA: ENST00000564011.5

LCMT1-204, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 5

Gene LCMT1, Length 1,168 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-204ENST00000564011 PDHXO00330 501 aa13.13□□□□□ -0.31
LCMT1-204ENST00000564011 EVI5O60447 810 aa13.13□□□□□ -0.31
LCMT1-204ENST00000564011 HHIPL2Q6UWX4 724 aa13.13□□□□□ -0.31
LCMT1-204ENST00000564011 C17orf99Q6UX52 265 aa13.13□□□□□ -0.31
LCMT1-204ENST00000564011 FASTKD5Q7L8L6 764 aaKnown RBP13.13□□□□□ -0.31
LCMT1-204ENST00000564011 WDR63Q8IWG1 891 aa13.13□□□□□ -0.31
LCMT1-204ENST00000564011 CNKSR2Q8WXI2 1034 aa13.13□□□□□ -0.31
LCMT1-204ENST00000564011 ZNF594Q96JF6 807 aaPredicted RBP13.13□□□□□ -0.31
LCMT1-204ENST00000564011 CPA4Q9UI42 421 aa13.13□□□□□ -0.31
LCMT1-204ENST00000564011 A0A1B0GUL6 1792 aa13.12□□□□□ -0.31
LCMT1-204ENST00000564011 FARP2O94887 1054 aaPredicted RBP13.12□□□□□ -0.31
LCMT1-204ENST00000564011 CCL5P13501 91 aa13.12□□□□□ -0.31
LCMT1-204ENST00000564011 SLC4A10Q6U841 1118 aa13.12□□□□□ -0.31
LCMT1-204ENST00000564011 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.12□□□□□ -0.31
LCMT1-204ENST00000564011 WDR66Q8TBY9 1149 aa13.12□□□□□ -0.31
LCMT1-204ENST00000564011 FAM151AQ8WW52 585 aa13.12□□□□□ -0.31
LCMT1-204ENST00000564011 ZKSCAN4Q969J2 545 aaPredicted RBP13.12□□□□□ -0.31
LCMT1-204ENST00000564011 PICK1Q9NRD5 415 aa13.12□□□□□ -0.31
LCMT1-204ENST00000564011 RBM27Q9P2N5 1060 aaKnown RBP13.12□□□□□ -0.31
LCMT1-204ENST00000564011 KIF16BQ96L93 1317 aa13.12□□□□□ -0.31
LCMT1-204ENST00000564011 FANCIQ9NVI1 1328 aa13.12□□□□□ -0.31
LCMT1-204ENST00000564011 VCANP13611 3396 aa13.11□□□□□ -0.31
LCMT1-204ENST00000564011 DLL1O00548 723 aa13.11□□□□□ -0.31
LCMT1-204ENST00000564011 CXCL11O14625 94 aa13.11□□□□□ -0.31
LCMT1-204ENST00000564011 OSBPP22059 807 aa13.11□□□□□ -0.31
LCMT1-204ENST00000564011 FBXO33Q7Z6M2 555 aa13.11□□□□□ -0.31
LCMT1-204ENST00000564011 ARHGAP39Q9C0H5 1083 aa13.11□□□□□ -0.31
LCMT1-204ENST00000564011 GNL3LQ9NVN8 582 aaKnown RBP13.11□□□□□ -0.31
LCMT1-204ENST00000564011 VAMP4O75379 141 aa13.1□□□□□ -0.31
LCMT1-204ENST00000564011 PDE8BO95263 885 aa13.1□□□□□ -0.31
LCMT1-204ENST00000564011 TFRCP02786 760 aaKnown RBP13.1□□□□□ -0.31
LCMT1-204ENST00000564011 PUM3Q15397 648 aaKnown RBP13.1□□□□□ -0.31
LCMT1-204ENST00000564011 SLF2Q8IX21 1173 aa13.1□□□□□ -0.31
LCMT1-204ENST00000564011 SMCR8Q8TEV9 937 aaPredicted RBP13.1□□□□□ -0.31
LCMT1-204ENST00000564011 U2AF1L4Q8WU68 220 aaKnown RBP13.1□□□□□ -0.31
LCMT1-204ENST00000564011 KCNH4Q9UQ05 1017 aa13.1□□□□□ -0.31
LCMT1-204ENST00000564011 F6X3S4 739 aa13.09□□□□□ -0.31
LCMT1-204ENST00000564011 TNPO2O14787 897 aaKnown RBP13.09□□□□□ -0.31
LCMT1-204ENST00000564011 SGPL1O95470 568 aa13.09□□□□□ -0.31
LCMT1-204ENST00000564011 SLC5A1P13866 664 aa13.09□□□□□ -0.31
LCMT1-204ENST00000564011 CACNB3P54284 484 aa13.09□□□□□ -0.31
LCMT1-204ENST00000564011 MTFR1Q15390 333 aa13.09□□□□□ -0.31
LCMT1-204ENST00000564011 NOL9Q5SY16 702 aaKnown RBP13.09□□□□□ -0.31
LCMT1-204ENST00000564011 MIGA2Q7L4E1 593 aa13.09□□□□□ -0.31
LCMT1-204ENST00000564011 ZGPATQ8N5A5 531 aaKnown RBP13.09□□□□□ -0.31
LCMT1-204ENST00000564011 PXYLP1Q8TE99 480 aa13.09□□□□□ -0.31
LCMT1-204ENST00000564011 COA7Q96BR5 231 aa13.09□□□□□ -0.31
LCMT1-204ENST00000564011 PNMA3Q9UL41 463 aa13.09□□□□□ -0.31
LCMT1-204ENST00000564011 IQSEC3Q9UPP2 1182 aaPredicted RBP13.09□□□□□ -0.31
LCMT1-204ENST00000564011 SLC45A1Q9Y2W3 748 aa13.09□□□□□ -0.31
LCMT1-204ENST00000564011 AOX1Q06278 1338 aa13.09□□□□□ -0.31
LCMT1-204ENST00000564011 ADCY3O60266 1144 aa13.08□□□□□ -0.32
LCMT1-204ENST00000564011 ECM2O94769 699 aaPredicted RBP13.08□□□□□ -0.32
LCMT1-204ENST00000564011 BCAMP50895 628 aa13.08□□□□□ -0.32
LCMT1-204ENST00000564011 CDAN1Q8IWY9 1227 aa13.08□□□□□ -0.32
LCMT1-204ENST00000564011 LRRFIP2Q9Y608 721 aaKnown RBP13.08□□□□□ -0.32
LCMT1-204ENST00000564011 ZBTB7BO15156 539 aaPredicted RBP13.07□□□□□ -0.32
LCMT1-204ENST00000564011 PRKCZQ05513 592 aa13.07□□□□□ -0.32
LCMT1-204ENST00000564011 EXOSC9Q06265 439 aaKnown RBP13.07□□□□□ -0.32
LCMT1-204ENST00000564011 PABPC4Q13310 644 aaKnown RBP eCLIP13.07□□□□□ -0.328e-7■□□□□ 8.3
LCMT1-204ENST00000564011 APOBEC3HQ6NTF7 200 aaKnown RBP13.07□□□□□ -0.32
LCMT1-204ENST00000564011 GPR153Q6NV75 609 aa13.07□□□□□ -0.32
LCMT1-204ENST00000564011 NECAB2Q7Z6G3 386 aa13.07□□□□□ -0.32
LCMT1-204ENST00000564011 SHISA4Q96DD7 197 aa13.07□□□□□ -0.32
LCMT1-204ENST00000564011 ZNF112Q9UJU3 913 aa13.07□□□□□ -0.32
LCMT1-204ENST00000564011 HDAC5Q9UQL6 1122 aa13.07□□□□□ -0.32
LCMT1-204ENST00000564011 SPTBN5Q9NRC6 3674 aaKnown RBP13.07□□□□□ -0.32
LCMT1-204ENST00000564011 LDHBP07195 334 aaKnown RBP13.06□□□□□ -0.32
LCMT1-204ENST00000564011 INPP5BP32019 993 aa13.06□□□□□ -0.32
LCMT1-204ENST00000564011 IRF5Q13568 498 aa13.06□□□□□ -0.32
LCMT1-204ENST00000564011 EPHA10Q5JZY3 1008 aa13.06□□□□□ -0.32
LCMT1-204ENST00000564011 ZSCAN29Q8IWY8 852 aaPredicted RBP13.06□□□□□ -0.32
LCMT1-204ENST00000564011 ANKLE1Q8NAG6 615 aa13.06□□□□□ -0.32
LCMT1-204ENST00000564011 LPIN2Q92539 896 aa13.06□□□□□ -0.32
LCMT1-204ENST00000564011 ADGRA2Q96PE1 1338 aa13.06□□□□□ -0.32
LCMT1-204ENST00000564011 MNX1P50219 401 aaPredicted RBP13.05□□□□□ -0.32
LCMT1-204ENST00000564011 TCP10Q12799 353 aa13.05□□□□□ -0.32
LCMT1-204ENST00000564011 SCYL3Q8IZE3 742 aa13.05□□□□□ -0.32
LCMT1-204ENST00000564011 TBC1D2Q9BYX2 928 aa13.05□□□□□ -0.32
LCMT1-204ENST00000564011 PUS3Q9BZE2 481 aaKnown RBP13.05□□□□□ -0.32
LCMT1-204ENST00000564011 TAOK2Q9UL54 1235 aa13.05□□□□□ -0.32
LCMT1-204ENST00000564011 AK9Q5TCS8 1911 aa13.05□□□□□ -0.32
LCMT1-204ENST00000564011 SEMA3EO15041 775 aa13.04□□□□□ -0.32
LCMT1-204ENST00000564011 INHAP05111 366 aa13.04□□□□□ -0.32
LCMT1-204ENST00000564011 BCRP11274 1271 aa13.04□□□□□ -0.32
LCMT1-204ENST00000564011 FLT3LGP49771 235 aa13.04□□□□□ -0.32
LCMT1-204ENST00000564011 RABL6Q3YEC7 729 aaPredicted RBP13.04□□□□□ -0.32
LCMT1-204ENST00000564011 GADL1Q6ZQY3 521 aa13.04□□□□□ -0.32
LCMT1-204ENST00000564011 UBE2Q1Q7Z7E8 422 aa13.04□□□□□ -0.32
LCMT1-204ENST00000564011 SUCLG2Q96I99 432 aa13.04□□□□□ -0.32
LCMT1-204ENST00000564011 DEFB118Q96PH6 123 aa13.04□□□□□ -0.32
LCMT1-204ENST00000564011 UNC93B1Q9H1C4 597 aa13.04□□□□□ -0.32
LCMT1-204ENST00000564011 BICC1Q9H694 974 aaKnown RBP13.04□□□□□ -0.32
LCMT1-204ENST00000564011 USP40Q9NVE5 1235 aa13.04□□□□□ -0.32
LCMT1-204ENST00000564011 FBXO3Q9UK99 471 aa13.04□□□□□ -0.32
LCMT1-204ENST00000564011 DENND2AQ9ULE3 1009 aa13.04□□□□□ -0.32
LCMT1-204ENST00000564011 ZHX2Q9Y6X8 837 aa13.04□□□□□ -0.32
LCMT1-204ENST00000564011 UTYO14607 1347 aa13.04□□□□□ -0.32
LCMT1-204ENST00000564011 CTNND1O60716 968 aaKnown RBP13.03□□□□□ -0.32
LCMT1-204ENST00000564011 ENTPD3O75355 529 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms