RNA–Protein interactions for RNA: ENST00000563835.1

PTPN9-203, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-203ENST00000563835 TBC1D9Q6ZT07 1266 aa11.39□□□□□ -0.59
PTPN9-203ENST00000563835 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.39□□□□□ -0.59
PTPN9-203ENST00000563835 ZNF384Q8TF68 577 aa11.39□□□□□ -0.59
PTPN9-203ENST00000563835 DBNDD2Q9BQY9 259 aa11.39□□□□□ -0.59
PTPN9-203ENST00000563835 TLR7Q9NYK1 1049 aaKnown RBP11.39□□□□□ -0.59
PTPN9-203ENST00000563835 HMG20BQ9P0W2 317 aa11.39□□□□□ -0.59
PTPN9-203ENST00000563835 ABCF2Q9UG63 623 aa11.39□□□□□ -0.59
PTPN9-203ENST00000563835 FPGT-TNNI3KV9GXZ4 949 aa11.39□□□□□ -0.59
PTPN9-203ENST00000563835 GAKO14976 1311 aa11.38□□□□□ -0.59
PTPN9-203ENST00000563835 SIPA1L1O43166 1804 aa11.38□□□□□ -0.59
PTPN9-203ENST00000563835 TBC1D8O95759 1140 aa11.38□□□□□ -0.59
PTPN9-203ENST00000563835 ARID4AP29374 1257 aaPredicted RBP11.38□□□□□ -0.59
PTPN9-203ENST00000563835 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.38□□□□□ -0.59
PTPN9-203ENST00000563835 DZIP1Q86YF9 867 aaKnown RBP11.38□□□□□ -0.59
PTPN9-203ENST00000563835 ANKRD13AQ8IZ07 590 aa11.38□□□□□ -0.59
PTPN9-203ENST00000563835 SLC10A4Q96EP9 437 aa11.38□□□□□ -0.59
PTPN9-203ENST00000563835 ABHD8Q96I13 439 aa11.38□□□□□ -0.59
PTPN9-203ENST00000563835 MRIQ9BWK5 157 aa11.38□□□□□ -0.59
PTPN9-203ENST00000563835 MCOLN1Q9GZU1 580 aa11.38□□□□□ -0.59
PTPN9-203ENST00000563835 R3HDMLQ9H3Y0 253 aa11.38□□□□□ -0.59
PTPN9-203ENST00000563835 FAM198AQ9UFP1 575 aa11.38□□□□□ -0.59
PTPN9-203ENST00000563835 RCAN3Q9UKA8 241 aa11.38□□□□□ -0.59
PTPN9-203ENST00000563835 COG6Q9Y2V7 657 aa11.38□□□□□ -0.59
PTPN9-203ENST00000563835 DOCK1Q14185 1865 aa11.38□□□□□ -0.59
PTPN9-203ENST00000563835 ZSWIM8A7E2V4 1837 aa11.37□□□□□ -0.59
PTPN9-203ENST00000563835 ATAD5Q96QE3 1844 aa11.37□□□□□ -0.59
PTPN9-203ENST00000563835 IGF2BP3O00425 579 aaKnown RBP eCLIP11.37□□□□□ -0.59
PTPN9-203ENST00000563835 ZBTB22O15209 634 aa11.37□□□□□ -0.59
PTPN9-203ENST00000563835 ZBTB48P10074 688 aaPredicted RBP11.37□□□□□ -0.59
PTPN9-203ENST00000563835 TM4SF4P48230 202 aa11.37□□□□□ -0.59
PTPN9-203ENST00000563835 MECOMQ03112 1051 aa11.37□□□□□ -0.59
PTPN9-203ENST00000563835 SREBF2Q12772 1141 aa11.37□□□□□ -0.59
PTPN9-203ENST00000563835 DGKZQ13574 1117 aa11.37□□□□□ -0.59
PTPN9-203ENST00000563835 GORABQ5T7V8 394 aa11.37□□□□□ -0.59
PTPN9-203ENST00000563835 C20orf194Q5TEA3 1177 aa11.37□□□□□ -0.59
PTPN9-203ENST00000563835 FAM83AQ86UY5 434 aa11.37□□□□□ -0.59
PTPN9-203ENST00000563835 ZFPM1Q8IX07 1006 aa11.37□□□□□ -0.59
PTPN9-203ENST00000563835 REM2Q8IYK8 340 aaPredicted RBP11.37□□□□□ -0.59
PTPN9-203ENST00000563835 SPATA5Q8NB90 893 aa11.37□□□□□ -0.59
PTPN9-203ENST00000563835 OPTNQ96CV9 577 aa11.37□□□□□ -0.59
PTPN9-203ENST00000563835 SNRKQ9NRH2 765 aa11.37□□□□□ -0.59
PTPN9-203ENST00000563835 USP40Q9NVE5 1235 aa11.37□□□□□ -0.59
PTPN9-203ENST00000563835 EXOC6BQ9Y2D4 811 aa11.37□□□□□ -0.59
PTPN9-203ENST00000563835 SNCAIPQ9Y6H5 919 aa11.37□□□□□ -0.59
PTPN9-203ENST00000563835 MROH7-TTC4A0A0A0MT08 1334 aa11.36□□□□□ -0.59
PTPN9-203ENST00000563835 SLURP2P0DP57 97 aa11.36□□□□□ -0.59
PTPN9-203ENST00000563835 BTDP43251 543 aa11.36□□□□□ -0.59
PTPN9-203ENST00000563835 FKBP1CQ5VVH2 108 aa11.36□□□□□ -0.59
PTPN9-203ENST00000563835 MIGA2Q7L4E1 593 aa11.36□□□□□ -0.59
PTPN9-203ENST00000563835 ZGPATQ8N5A5 531 aaKnown RBP11.36□□□□□ -0.59
PTPN9-203ENST00000563835 ZKSCAN4Q969J2 545 aaPredicted RBP11.36□□□□□ -0.59
PTPN9-203ENST00000563835 WRNIP1Q96S55 665 aa11.36□□□□□ -0.59
PTPN9-203ENST00000563835 DDX4Q9NQI0 724 aaKnown RBP11.36□□□□□ -0.59
PTPN9-203ENST00000563835 DBNLQ9UJU6 430 aaKnown RBP11.36□□□□□ -0.59
PTPN9-203ENST00000563835 NOP58Q9Y2X3 529 aaKnown RBP11.36□□□□□ -0.59
PTPN9-203ENST00000563835 PHIPQ8WWQ0 1821 aa11.36□□□□□ -0.59
PTPN9-203ENST00000563835 ATRNL1Q5VV63 1379 aa11.36□□□□□ -0.59
PTPN9-203ENST00000563835 HTTP42858 3142 aa11.35□□□□□ -0.59
PTPN9-203ENST00000563835 PTPRFP10586 1907 aa11.35□□□□□ -0.59
PTPN9-203ENST00000563835 MANSC4A6NHS7 340 aaPredicted RBP11.35□□□□□ -0.59
PTPN9-203ENST00000563835 RGS3P49796 1198 aa11.35□□□□□ -0.59
PTPN9-203ENST00000563835 TTC39AQ5SRH9 613 aa11.35□□□□□ -0.59
PTPN9-203ENST00000563835 ERICH6Q7L0X2 663 aa11.35□□□□□ -0.59
PTPN9-203ENST00000563835 IFNL1Q8IU54 200 aa11.35□□□□□ -0.59
PTPN9-203ENST00000563835 ZNF296Q8WUU4 475 aaPredicted RBP11.35□□□□□ -0.59
PTPN9-203ENST00000563835 FAM151AQ8WW52 585 aa11.35□□□□□ -0.59
PTPN9-203ENST00000563835 EAF2Q96CJ1 260 aaPredicted RBP11.35□□□□□ -0.59
PTPN9-203ENST00000563835 OTUD5Q96G74 571 aa11.35□□□□□ -0.59
PTPN9-203ENST00000563835 CCDC8Q9H0W5 538 aaPredicted RBP11.35□□□□□ -0.59
PTPN9-203ENST00000563835 GPR108Q9NPR9 543 aa11.35□□□□□ -0.59
PTPN9-203ENST00000563835 NDUFB9Q9Y6M9 179 aa11.35□□□□□ -0.59
PTPN9-203ENST00000563835 UNCXA6NJT0 531 aa11.34□□□□□ -0.59
PTPN9-203ENST00000563835 WDHD1O75717 1129 aaPredicted RBP11.34□□□□□ -0.59
PTPN9-203ENST00000563835 INPP5BP32019 993 aa11.34□□□□□ -0.59
PTPN9-203ENST00000563835 RHBDL3P58872 404 aa11.34□□□□□ -0.59
PTPN9-203ENST00000563835 MAP3K9P80192 1104 aa11.34□□□□□ -0.59
PTPN9-203ENST00000563835 PICALMQ13492 652 aa11.34□□□□□ -0.59
PTPN9-203ENST00000563835 SH3BP5LQ7L8J4 393 aa11.34□□□□□ -0.59
PTPN9-203ENST00000563835 SIRT2Q8IXJ6 389 aa11.34□□□□□ -0.59
PTPN9-203ENST00000563835 NSUN4Q96CB9 384 aaKnown RBP11.34□□□□□ -0.59
PTPN9-203ENST00000563835 MS4A4AQ96JQ5 239 aa11.34□□□□□ -0.59
PTPN9-203ENST00000563835 PTPN18Q99952 460 aa11.34□□□□□ -0.59
PTPN9-203ENST00000563835 RAI14Q9P0K7 980 aa11.34□□□□□ -0.59
PTPN9-203ENST00000563835 CSADQ9Y600 493 aa11.34□□□□□ -0.59
PTPN9-203ENST00000563835 DDX60LQ5H9U9 1706 aaKnown RBP11.33□□□□□ -0.6
PTPN9-203ENST00000563835 DDTLA6NHG4 134 aaPredicted RBP11.33□□□□□ -0.6
PTPN9-203ENST00000563835 SPDYE5A6NIY4 337 aa11.33□□□□□ -0.6
PTPN9-203ENST00000563835 GPR25O00155 361 aa11.33□□□□□ -0.6
PTPN9-203ENST00000563835 APBB1O00213 710 aa11.33□□□□□ -0.6
PTPN9-203ENST00000563835 CYP2E1P05181 493 aaPredicted RBP11.33□□□□□ -0.6
PTPN9-203ENST00000563835 UQCRFS1P1P0C7P4 283 aa11.33□□□□□ -0.6
PTPN9-203ENST00000563835 ZAP70P43403 619 aa11.33□□□□□ -0.6
PTPN9-203ENST00000563835 SPTY2D1Q68D10 685 aaPredicted RBP11.33□□□□□ -0.6
PTPN9-203ENST00000563835 ADGRA1Q86SQ6 560 aa11.33□□□□□ -0.6
PTPN9-203ENST00000563835 BRI3BPQ8WY22 251 aa11.33□□□□□ -0.6
PTPN9-203ENST00000563835 IDI2Q9BXS1 227 aa11.33□□□□□ -0.6
PTPN9-203ENST00000563835 ZNF341Q9BYN7 854 aa11.33□□□□□ -0.6
PTPN9-203ENST00000563835 IL1RAPL2Q9NP60 686 aa11.33□□□□□ -0.6
PTPN9-203ENST00000563835 PIH1D3Q9NQM4 214 aaKnown RBP11.33□□□□□ -0.6
PTPN9-203ENST00000563835 ZBTB40Q9NUA8 1239 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms