RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 ANKRD23Q86SG2 305 aa14.47□□□□□ -0.09
HDGFL3-204ENST00000563790 ZBTB3Q9H5J0 574 aa14.47□□□□□ -0.09
HDGFL3-204ENST00000563790 FRYLO94915 3013 aa14.46□□□□□ -0.09
HDGFL3-204ENST00000563790 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.46□□□□□ -0.09
HDGFL3-204ENST00000563790 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.46□□□□□ -0.09
HDGFL3-204ENST00000563790 PDHXO00330 501 aa14.46□□□□□ -0.09
HDGFL3-204ENST00000563790 IRF6O14896 467 aa14.46□□□□□ -0.09
HDGFL3-204ENST00000563790 MAP3K9P80192 1104 aa14.46□□□□□ -0.09
HDGFL3-204ENST00000563790 NGEFQ8N5V2 710 aa14.46□□□□□ -0.09
HDGFL3-204ENST00000563790 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.46□□□□□ -0.09
HDGFL3-204ENST00000563790 CSADQ9Y600 493 aa14.46□□□□□ -0.09
HDGFL3-204ENST00000563790 CEMIPQ8WUJ3 1361 aa14.46□□□□□ -0.1
HDGFL3-204ENST00000563790 PTPRFP10586 1907 aa14.45□□□□□ -0.1
HDGFL3-204ENST00000563790 TNPO2O14787 897 aaKnown RBP14.45□□□□□ -0.1
HDGFL3-204ENST00000563790 BADQ92934 168 aa14.45□□□□□ -0.1
HDGFL3-204ENST00000563790 TAOK2Q9UL54 1235 aa14.45□□□□□ -0.1
HDGFL3-204ENST00000563790 EP300Q09472 2414 aaPredicted RBP14.45□□□□□ -0.1
HDGFL3-204ENST00000563790 TECTAO75443 2155 aa14.44□□□□□ -0.1
HDGFL3-204ENST00000563790 ACAP1Q15027 740 aa14.44□□□□□ -0.1
HDGFL3-204ENST00000563790 STRIP1Q5VSL9 837 aa14.44□□□□□ -0.1
HDGFL3-204ENST00000563790 ERO1BQ86YB8 467 aa14.44□□□□□ -0.1
HDGFL3-204ENST00000563790 GGA1Q9UJY5 639 aa14.44□□□□□ -0.1
HDGFL3-204ENST00000563790 ALADP13716 330 aa14.43□□□□□ -0.1
HDGFL3-204ENST00000563790 ID4P47928 161 aa14.42□□□□□ -0.1
HDGFL3-204ENST00000563790 PTPN5P54829 565 aa14.42□□□□□ -0.1
HDGFL3-204ENST00000563790 PPIL2Q13356 520 aa14.42□□□□□ -0.1
HDGFL3-204ENST00000563790 RASA3Q14644 834 aa14.42□□□□□ -0.1
HDGFL3-204ENST00000563790 HERVK_113Q902F9 699 aa14.42□□□□□ -0.1
HDGFL3-204ENST00000563790 CNTNAP3BQ96NU0 1288 aa14.42□□□□□ -0.1
HDGFL3-204ENST00000563790 CNTNAP3Q9BZ76 1288 aa14.42□□□□□ -0.1
HDGFL3-204ENST00000563790 GNAT3A8MTJ3 354 aa14.41□□□□□ -0.1
HDGFL3-204ENST00000563790 TRIM32Q13049 653 aa14.41□□□□□ -0.1
HDGFL3-204ENST00000563790 DLGAP5Q15398 846 aa14.41□□□□□ -0.1
HDGFL3-204ENST00000563790 KIAA0825Q8IV33 1275 aa14.41□□□□□ -0.1
HDGFL3-204ENST00000563790 PRSS33Q8NF86 280 aa14.41□□□□□ -0.1
HDGFL3-204ENST00000563790 PARK7Q99497 189 aaKnown RBP14.41□□□□□ -0.1
HDGFL3-204ENST00000563790 ANKIB1Q9P2G1 1089 aa14.41□□□□□ -0.1
HDGFL3-204ENST00000563790 KCNH4Q9UQ05 1017 aa14.41□□□□□ -0.1
HDGFL3-204ENST00000563790 SNCAIPQ9Y6H5 919 aa14.41□□□□□ -0.1
HDGFL3-204ENST00000563790 KMT2EQ8IZD2 1858 aa14.41□□□□□ -0.1
HDGFL3-204ENST00000563790 MED19A0JLT2 244 aaPredicted RBP14.4□□□□□ -0.1
HDGFL3-204ENST00000563790 ANKS1AQ92625 1134 aa14.4□□□□□ -0.1
HDGFL3-204ENST00000563790 COG5Q9UP83 839 aa14.4□□□□□ -0.1
HDGFL3-204ENST00000563790 HMOX1P09601 288 aa14.39□□□□□ -0.11
HDGFL3-204ENST00000563790 MAP3K21Q5TCX8 1036 aa14.39□□□□□ -0.11
HDGFL3-204ENST00000563790 COA7Q96BR5 231 aa14.39□□□□□ -0.11
HDGFL3-204ENST00000563790 SH3TC1Q8TE82 1336 aa14.39□□□□□ -0.11
HDGFL3-204ENST00000563790 CLRN2A0PK11 232 aa14.38□□□□□ -0.11
HDGFL3-204ENST00000563790 MYO1BO43795 1136 aa14.38□□□□□ -0.11
HDGFL3-204ENST00000563790 RTP1P59025 263 aa14.38□□□□□ -0.11
HDGFL3-204ENST00000563790 RPS8P62241 208 aaKnown RBP14.38□□□□□ -0.11
HDGFL3-204ENST00000563790 SF3B3Q15393 1217 aaKnown RBP14.38□□□□□ -0.11
HDGFL3-204ENST00000563790 SENP6Q9GZR1 1112 aaPredicted RBP14.38□□□□□ -0.11
HDGFL3-204ENST00000563790 VEZTQ9HBM0 779 aa14.38□□□□□ -0.11
HDGFL3-204ENST00000563790 ASPMQ8IZT6 3477 aa14.38□□□□□ -0.11
HDGFL3-204ENST00000563790 SKIV2LQ15477 1246 aaKnown RBP14.37□□□□□ -0.11
HDGFL3-204ENST00000563790 PBX4Q9BYU1 374 aa14.37□□□□□ -0.11
HDGFL3-204ENST00000563790 SPEF2Q9C093 1822 aa14.36□□□□□ -0.11
HDGFL3-204ENST00000563790 CYP2C8P10632 490 aa14.36□□□□□ -0.11
HDGFL3-204ENST00000563790 ATN1P54259 1190 aaPredicted RBP14.36□□□□□ -0.11
HDGFL3-204ENST00000563790 EPHB4P54760 987 aa14.36□□□□□ -0.11
HDGFL3-204ENST00000563790 MOGSQ13724 837 aa14.36□□□□□ -0.11
HDGFL3-204ENST00000563790 LHX8Q68G74 356 aa14.36□□□□□ -0.11
HDGFL3-204ENST00000563790 HFE2Q6ZVN8 426 aa14.36□□□□□ -0.11
HDGFL3-204ENST00000563790 MICALL1Q8N3F8 863 aa14.36□□□□□ -0.11
HDGFL3-204ENST00000563790 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.36□□□□□ -0.11
HDGFL3-204ENST00000563790 FBXW7Q969H0 707 aa14.36□□□□□ -0.11
HDGFL3-204ENST00000563790 MFSD14AQ96MC6 490 aa14.36□□□□□ -0.11
HDGFL3-204ENST00000563790 TEPSINQ96N21 525 aa14.36□□□□□ -0.11
HDGFL3-204ENST00000563790 SPDYE2BA6NHP3 402 aa14.35□□□□□ -0.11
HDGFL3-204ENST00000563790 SLC4A2P04920 1241 aa14.35□□□□□ -0.11
HDGFL3-204ENST00000563790 SPDYE6P0CI01 402 aa14.35□□□□□ -0.11
HDGFL3-204ENST00000563790 PBX2P40425 430 aa14.35□□□□□ -0.11
HDGFL3-204ENST00000563790 NLRP10Q86W26 655 aa14.35□□□□□ -0.11
HDGFL3-204ENST00000563790 PRDM5Q9NQX1 630 aaPredicted RBP14.35□□□□□ -0.11
HDGFL3-204ENST00000563790 TRMT112Q9UI30 125 aaKnown RBP14.35□□□□□ -0.11
HDGFL3-204ENST00000563790 PCDHAC2Q9Y5I4 1007 aa14.35□□□□□ -0.11
HDGFL3-204ENST00000563790 BPTFQ12830 3046 aa14.35□□□□□ -0.11
HDGFL3-204ENST00000563790 ATRNL1Q5VV63 1379 aa14.34□□□□□ -0.11
HDGFL3-204ENST00000563790 MED23Q9ULK4 1368 aa14.34□□□□□ -0.11
HDGFL3-204ENST00000563790 PRKAR2AP13861 404 aaKnown RBP14.34□□□□□ -0.11
HDGFL3-204ENST00000563790 PPATQ06203 517 aa14.34□□□□□ -0.11
HDGFL3-204ENST00000563790 CDAN1Q8IWY9 1227 aa14.34□□□□□ -0.11
HDGFL3-204ENST00000563790 GJD3Q8N144 294 aa14.34□□□□□ -0.11
HDGFL3-204ENST00000563790 PRRX2Q99811 253 aa14.34□□□□□ -0.11
HDGFL3-204ENST00000563790 RRP7AQ9Y3A4 280 aaKnown RBP14.34□□□□□ -0.11
HDGFL3-204ENST00000563790 AOX1Q06278 1338 aa14.34□□□□□ -0.11
HDGFL3-204ENST00000563790 TCF15Q12870 199 aa14.33□□□□□ -0.12
HDGFL3-204ENST00000563790 TNFAIP1Q13829 316 aa14.33□□□□□ -0.12
HDGFL3-204ENST00000563790 TTLL5Q6EMB2 1281 aa14.33□□□□□ -0.12
HDGFL3-204ENST00000563790 TRIB2Q92519 343 aa14.33□□□□□ -0.12
HDGFL3-204ENST00000563790 PRMT6Q96LA8 375 aaPredicted RBP14.33□□□□□ -0.12
HDGFL3-204ENST00000563790 PDLIM7Q9NR12 457 aa14.33□□□□□ -0.12
HDGFL3-204ENST00000563790 ATP11BQ9Y2G3 1177 aa14.33□□□□□ -0.12
HDGFL3-204ENST00000563790 XDHP47989 1333 aa14.33□□□□□ -0.12
HDGFL3-204ENST00000563790 POTEB3A0JP26 581 aa14.32□□□□□ -0.12
HDGFL3-204ENST00000563790 MYL6BP14649 208 aa14.32□□□□□ -0.12
HDGFL3-204ENST00000563790 POTEBQ6S5H4 581 aa14.32□□□□□ -0.12
HDGFL3-204ENST00000563790 GAS2L2Q8NHY3 880 aa14.32□□□□□ -0.12
HDGFL3-204ENST00000563790 COL4A6Q14031 1691 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms