RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 PDE2AO00408 941 aaPredicted RBP6.62□□□□□ -1.35
CDR2-203ENST00000563573 NPR3P17342 541 aa6.62□□□□□ -1.35
CDR2-203ENST00000563573 AGGF1Q8N302 714 aaeCLIP6.62□□□□□ -1.35
CDR2-203ENST00000563573 CCDC82Q8N4S0 544 aa6.62□□□□□ -1.35
CDR2-203ENST00000563573 C1orf127Q8N9H9 656 aa6.62□□□□□ -1.35
CDR2-203ENST00000563573 GGNBP2Q9H3C7 697 aa6.62□□□□□ -1.35
CDR2-203ENST00000563573 SH2B1Q9NRF2 756 aaPredicted RBP6.62□□□□□ -1.35
CDR2-203ENST00000563573 DZANK1Q9NVP4 752 aa6.62□□□□□ -1.35
CDR2-203ENST00000563573 KANSL3Q9P2N6 904 aa6.62□□□□□ -1.35
CDR2-203ENST00000563573 BCORL1Q5H9F3 1711 aa6.62□□□□□ -1.35
CDR2-203ENST00000563573 KDM5DQ9BY66 1539 aa6.61□□□□□ -1.35
CDR2-203ENST00000563573 WASHC2CQ9Y4E1 1318 aa6.61□□□□□ -1.35
CDR2-203ENST00000563573 EDN3P14138 238 aa6.61□□□□□ -1.35
CDR2-203ENST00000563573 EPHA1P21709 976 aa6.61□□□□□ -1.35
CDR2-203ENST00000563573 MPSTP25325 297 aa6.61□□□□□ -1.35
CDR2-203ENST00000563573 CDC25BP30305 580 aa6.61□□□□□ -1.35
CDR2-203ENST00000563573 ANKRD34AQ69YU3 496 aa6.61□□□□□ -1.35
CDR2-203ENST00000563573 TXNDC11Q6PKC3 985 aa6.61□□□□□ -1.35
CDR2-203ENST00000563573 TMEM102Q8N9M5 508 aaPredicted RBP6.61□□□□□ -1.35
CDR2-203ENST00000563573 UBL7Q96S82 380 aaPredicted RBP6.61□□□□□ -1.35
CDR2-203ENST00000563573 DEPDC5O75140 1603 aa6.61□□□□□ -1.35
CDR2-203ENST00000563573 IQGAP3Q86VI3 1631 aa6.61□□□□□ -1.35
CDR2-203ENST00000563573 REREQ9P2R6 1566 aa6.61□□□□□ -1.35
CDR2-203ENST00000563573 YEATS2Q9ULM3 1422 aa6.6□□□□□ -1.35
CDR2-203ENST00000563573 IGLV1-40P01703 118 aa6.6□□□□□ -1.35
CDR2-203ENST00000563573 FKBP4Q02790 459 aaKnown RBP eCLIP6.6□□□□□ -1.35
CDR2-203ENST00000563573 B4GALNT3Q6L9W6 998 aa6.6□□□□□ -1.35
CDR2-203ENST00000563573 KIAA1211Q6ZU35 1233 aa6.6□□□□□ -1.35
CDR2-203ENST00000563573 UTP4Q969X6 686 aaKnown RBP6.6□□□□□ -1.35
CDR2-203ENST00000563573 PSMG3-AS1Q96PY0 264 aa6.6□□□□□ -1.35
CDR2-203ENST00000563573 CARD10Q9BWT7 1032 aa6.6□□□□□ -1.35
CDR2-203ENST00000563573 CFAP65Q6ZU64 1925 aaKnown RBP6.6□□□□□ -1.35
CDR2-203ENST00000563573 FAM135AQ9P2D6 1515 aa6.6□□□□□ -1.35
CDR2-203ENST00000563573 RNF17Q9BXT8 1623 aaKnown RBP6.59□□□□□ -1.35
CDR2-203ENST00000563573 NFKBIEO00221 500 aa6.59□□□□□ -1.35
CDR2-203ENST00000563573 TM4SF5O14894 197 aa6.59□□□□□ -1.35
CDR2-203ENST00000563573 SART1O43290 800 aaKnown RBP6.59□□□□□ -1.35
CDR2-203ENST00000563573 PHACTR2O75167 634 aa6.59□□□□□ -1.35
CDR2-203ENST00000563573 WISP1O95388 367 aa6.59□□□□□ -1.35
CDR2-203ENST00000563573 MLECQ14165 292 aa6.59□□□□□ -1.35
CDR2-203ENST00000563573 SNX29Q8TEQ0 813 aa6.59□□□□□ -1.35
CDR2-203ENST00000563573 BSNDQ8WZ55 320 aa6.59□□□□□ -1.35
CDR2-203ENST00000563573 KLHDC7BQ96G42 594 aa6.59□□□□□ -1.35
CDR2-203ENST00000563573 FAM46AQ96IP4 442 aaKnown RBP6.59□□□□□ -1.35
CDR2-203ENST00000563573 SIN3AQ96ST3 1273 aa6.59□□□□□ -1.35
CDR2-203ENST00000563573 RNF208Q9H0X6 261 aa6.59□□□□□ -1.35
CDR2-203ENST00000563573 PCMTD2Q9NV79 361 aa6.59□□□□□ -1.35
CDR2-203ENST00000563573 KCNK4Q9NYG8 393 aa6.59□□□□□ -1.35
CDR2-203ENST00000563573 POLIQ9UNA4 740 aa6.59□□□□□ -1.35
CDR2-203ENST00000563573 AGLP35573 1532 aa6.59□□□□□ -1.35
CDR2-203ENST00000563573 ARHGEF40Q8TER5 1519 aa6.59□□□□□ -1.35
CDR2-203ENST00000563573 PZPP20742 1482 aa6.59□□□□□ -1.36
CDR2-203ENST00000563573 CEP152O94986 1710 aa6.59□□□□□ -1.36
CDR2-203ENST00000563573 TET3O43151 1660 aa6.58□□□□□ -1.36
CDR2-203ENST00000563573 C19orf57Q0VDD7 668 aa6.58□□□□□ -1.36
CDR2-203ENST00000563573 CLEC10AQ8IUN9 316 aa6.58□□□□□ -1.36
CDR2-203ENST00000563573 MYRFLQ96LU7 910 aa6.58□□□□□ -1.36
CDR2-203ENST00000563573 OSMRQ99650 979 aa6.58□□□□□ -1.36
CDR2-203ENST00000563573 CHRDQ9H2X0 955 aa6.58□□□□□ -1.36
CDR2-203ENST00000563573 SOX13Q9UN79 622 aa6.58□□□□□ -1.36
CDR2-203ENST00000563573 HIF3AQ9Y2N7 669 aa6.58□□□□□ -1.36
CDR2-203ENST00000563573 ZC3H13Q5T200 1668 aaKnown RBP6.58□□□□□ -1.36
CDR2-203ENST00000563573 PRDM15P57071 1507 aaPredicted RBP6.57□□□□□ -1.36
CDR2-203ENST00000563573 MEGF11A6BM72 1044 aa6.57□□□□□ -1.36
CDR2-203ENST00000563573 COBLO75128 1261 aa6.57□□□□□ -1.36
CDR2-203ENST00000563573 TNFRSF21O75509 655 aa6.57□□□□□ -1.36
CDR2-203ENST00000563573 GRIK1P39086 918 aa6.57□□□□□ -1.36
CDR2-203ENST00000563573 INTS5Q6P9B9 1019 aaKnown RBP6.57□□□□□ -1.36
CDR2-203ENST00000563573 ADAMTSL4Q6UY14 1074 aa6.57□□□□□ -1.36
CDR2-203ENST00000563573 ARMC10Q8N2F6 343 aa6.57□□□□□ -1.36
CDR2-203ENST00000563573 FOXD4L4Q8WXT5 416 aaPredicted RBP6.57□□□□□ -1.36
CDR2-203ENST00000563573 NXPE3Q969Y0 559 aa6.57□□□□□ -1.36
CDR2-203ENST00000563573 VWDEQ8N2E2 1590 aa6.57□□□□□ -1.36
CDR2-203ENST00000563573 TONSLQ96HA7 1378 aa6.57□□□□□ -1.36
CDR2-203ENST00000563573 ANKRD30BQ9BXX2 1392 aa6.57□□□□□ -1.36
CDR2-203ENST00000563573 LMTK2Q8IWU2 1503 aa6.56□□□□□ -1.36
CDR2-203ENST00000563573 E9PCH4 1651 aa6.56□□□□□ -1.36
CDR2-203ENST00000563573 DDX3YO15523 660 aaKnown RBP6.56□□□□□ -1.36
CDR2-203ENST00000563573 NEFLP07196 543 aa6.56□□□□□ -1.36
CDR2-203ENST00000563573 NFIAQ12857 509 aa6.56□□□□□ -1.36
CDR2-203ENST00000563573 IKBKEQ14164 716 aa6.56□□□□□ -1.36
CDR2-203ENST00000563573 RNF43Q68DV7 783 aa6.56□□□□□ -1.36
CDR2-203ENST00000563573 FDX2Q6P4F2 183 aa6.56□□□□□ -1.36
CDR2-203ENST00000563573 FAM20CQ8IXL6 584 aa6.56□□□□□ -1.36
CDR2-203ENST00000563573 SLC7A3Q8WY07 619 aa6.56□□□□□ -1.36
CDR2-203ENST00000563573 RUSC1Q9BVN2 902 aa6.56□□□□□ -1.36
CDR2-203ENST00000563573 KRTAP4-8Q9BYQ9 185 aa6.56□□□□□ -1.36
CDR2-203ENST00000563573 SOX17Q9H6I2 414 aaPredicted RBP6.56□□□□□ -1.36
CDR2-203ENST00000563573 USTQ9Y2C2 406 aa6.56□□□□□ -1.36
CDR2-203ENST00000563573 AMOTL2Q9Y2J4 779 aa6.56□□□□□ -1.36
CDR2-203ENST00000563573 SPHKAPQ2M3C7 1700 aa6.56□□□□□ -1.36
CDR2-203ENST00000563573 CLTCQ00610 1675 aaKnown RBP6.55□□□□□ -1.36
CDR2-203ENST00000563573 KIF1BO60333 1816 aa6.55□□□□□ -1.36
CDR2-203ENST00000563573 CAMSAP1Q5T5Y3 1602 aa6.55□□□□□ -1.36
CDR2-203ENST00000563573 MROH1Q8NDA8 1641 aa6.55□□□□□ -1.36
CDR2-203ENST00000563573 A6NHS1 94 aa6.55□□□□□ -1.36
CDR2-203ENST00000563573 ADAM11O75078 769 aa6.55□□□□□ -1.36
CDR2-203ENST00000563573 UBASH3BQ8TF42 649 aa6.55□□□□□ -1.36
CDR2-203ENST00000563573 FAM83CQ9BQN1 747 aa6.55□□□□□ -1.36
CDR2-203ENST00000563573 DBNDD2Q9BQY9 259 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms