RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 ZNF384Q8TF68 577 aa34.73■■■■□ 3.15
NME3-203ENST00000563367 TMOD2Q9NZR1 351 aa34.73■■■■□ 3.15
NME3-203ENST00000563367 LDLRAD1Q5T700 205 aa34.72■■■■□ 3.15
NME3-203ENST00000563367 FKBP1CQ5VVH2 108 aa34.72■■■■□ 3.15
NME3-203ENST00000563367 AACSQ86V21 672 aa34.72■■■■□ 3.15
NME3-203ENST00000563367 AIDAQ96BJ3 306 aa34.72■■■■□ 3.15
NME3-203ENST00000563367 GAKO14976 1311 aa34.72■■■■□ 3.15
NME3-203ENST00000563367 MECOMQ03112 1051 aa34.71■■■■□ 3.15
NME3-203ENST00000563367 MAP3K11Q16584 847 aa34.71■■■■□ 3.15
NME3-203ENST00000563367 ZNF512BQ96KM6 892 aaPredicted RBP34.71■■■■□ 3.15
NME3-203ENST00000563367 AK9Q5TCS8 1911 aa34.71■■■■□ 3.15
NME3-203ENST00000563367 KIF23Q02241 960 aaPredicted RBP34.7■■■■□ 3.15
NME3-203ENST00000563367 FAM83AQ86UY5 434 aa34.7■■■■□ 3.15
NME3-203ENST00000563367 KIF1BPQ96EK5 621 aa34.7■■■■□ 3.15
NME3-203ENST00000563367 OTOFQ9HC10 1997 aa34.69■■■■□ 3.14
NME3-203ENST00000563367 PPP1R12BO60237 982 aaPredicted RBP34.69■■■■□ 3.14
NME3-203ENST00000563367 USP2O75604 605 aaPredicted RBP34.69■■■■□ 3.14
NME3-203ENST00000563367 FAM163AQ96GL9 167 aaPredicted RBP34.69■■■■□ 3.14
NME3-203ENST00000563367 USP40Q9NVE5 1235 aa34.69■■■■□ 3.14
NME3-203ENST00000563367 RAB11FIP3O75154 756 aa34.67■■■■□ 3.14
NME3-203ENST00000563367 NFIAQ12857 509 aa34.67■■■■□ 3.14
NME3-203ENST00000563367 NSUN4Q96CB9 384 aaKnown RBP34.67■■■■□ 3.14
NME3-203ENST00000563367 RAI14Q9P0K7 980 aa34.67■■■■□ 3.14
NME3-203ENST00000563367 MROH7-TTC4A0A0A0MT08 1334 aa34.66■■■■□ 3.14
NME3-203ENST00000563367 CYP2E1P05181 493 aaPredicted RBP34.66■■■■□ 3.14
NME3-203ENST00000563367 SLF2Q8IX21 1173 aa34.66■■■■□ 3.14
NME3-203ENST00000563367 ZAP70P43403 619 aa34.65■■■■□ 3.14
NME3-203ENST00000563367 CTCFP49711 727 aaPredicted RBP34.65■■■■□ 3.14
NME3-203ENST00000563367 CLMNQ96JQ2 1002 aa34.65■■■■□ 3.14
NME3-203ENST00000563367 BEGAINQ9BUH8 593 aa34.65■■■■□ 3.14
NME3-203ENST00000563367 LRP2BPQ9P2M1 347 aa34.65■■■■□ 3.14
NME3-203ENST00000563367 MAST2Q6P0Q8 1798 aa34.64■■■■□ 3.14
NME3-203ENST00000563367 COL13A1Q5TAT6 717 aaPredicted RBP34.64■■■■□ 3.14
NME3-203ENST00000563367 CLASRPQ8N2M8 674 aaKnown RBP34.64■■■■□ 3.14
NME3-203ENST00000563367 FAM198AQ9UFP1 575 aa34.64■■■■□ 3.14
NME3-203ENST00000563367 HSPA8P11142 646 aaKnown RBP34.63■■■■□ 3.13
NME3-203ENST00000563367 BTDP43251 543 aa34.63■■■■□ 3.13
NME3-203ENST00000563367 TCP10Q12799 353 aa34.63■■■■□ 3.13
NME3-203ENST00000563367 FAM151AQ8WW52 585 aa34.63■■■■□ 3.13
NME3-203ENST00000563367 CSRNP1Q96S65 589 aa34.63■■■■□ 3.13
NME3-203ENST00000563367 ZBTB4Q9P1Z0 1013 aaPredicted RBP34.63■■■■□ 3.13
NME3-203ENST00000563367 GPR75-ASB3A0A0A6YYF3 556 aa34.62■■■■□ 3.13
NME3-203ENST00000563367 IREB2P48200 963 aaKnown RBP34.62■■■■□ 3.13
NME3-203ENST00000563367 CRBNQ96SW2 442 aa34.62■■■■□ 3.13
NME3-203ENST00000563367 BCL11AQ9H165 835 aa34.62■■■■□ 3.13
NME3-203ENST00000563367 PIH1D3Q9NQM4 214 aaKnown RBP34.62■■■■□ 3.13
NME3-203ENST00000563367 NDUFB9Q9Y6M9 179 aa34.62■■■■□ 3.13
NME3-203ENST00000563367 RPAP1Q9BWH6 1393 aaPredicted RBP34.62■■■■□ 3.13
NME3-203ENST00000563367 LBX1P52954 281 aa34.61■■■■□ 3.13
NME3-203ENST00000563367 GSTO1P78417 241 aa34.61■■■■□ 3.13
NME3-203ENST00000563367 MKRN3Q13064 507 aaKnown RBP34.61■■■■□ 3.13
NME3-203ENST00000563367 ZFPM1Q8IX07 1006 aa34.61■■■■□ 3.13
NME3-203ENST00000563367 PCDHB15Q9Y5E8 787 aa34.61■■■■□ 3.13
NME3-203ENST00000563367 SLC10A4Q96EP9 437 aa34.6■■■■□ 3.13
NME3-203ENST00000563367 TSKSQ9UJT2 592 aa34.6■■■■□ 3.13
NME3-203ENST00000563367 RFX7Q2KHR2 1363 aa34.6■■■■□ 3.13
NME3-203ENST00000563367 LDHCP07864 332 aa34.59■■■■□ 3.13
NME3-203ENST00000563367 DOCK2Q92608 1830 aa34.59■■■■□ 3.13
NME3-203ENST00000563367 UNCXA6NJT0 531 aa34.58■■■■□ 3.13
NME3-203ENST00000563367 IFIT2P09913 472 aaKnown RBP34.58■■■■□ 3.13
NME3-203ENST00000563367 RHBDL3P58872 404 aa34.58■■■■□ 3.13
NME3-203ENST00000563367 SPRYD7Q5W111 196 aa34.58■■■■□ 3.13
NME3-203ENST00000563367 ANKRD13AQ8IZ07 590 aa34.58■■■■□ 3.13
NME3-203ENST00000563367 IDI2Q9BXS1 227 aa34.58■■■■□ 3.13
NME3-203ENST00000563367 WDHD1O75717 1129 aaPredicted RBP34.57■■■■□ 3.12
NME3-203ENST00000563367 RGS3P49796 1198 aa34.57■■■■□ 3.12
NME3-203ENST00000563367 PPP1R3FQ6ZSY5 799 aaPredicted RBP34.56■■■■□ 3.12
NME3-203ENST00000563367 ANTXR1Q9H6X2 564 aa34.56■■■■□ 3.12
NME3-203ENST00000563367 DCTPP1Q9H773 170 aa34.56■■■■□ 3.12
NME3-203ENST00000563367 LAMB1P07942 1786 aa34.56■■■■□ 3.12
NME3-203ENST00000563367 CDK5RAP2Q96SN8 1893 aa34.55■■■■□ 3.12
NME3-203ENST00000563367 CA12O43570 354 aa34.55■■■■□ 3.12
NME3-203ENST00000563367 SMARCA5O60264 1052 aaPredicted RBP34.55■■■■□ 3.12
NME3-203ENST00000563367 NAA16Q6N069 864 aaPredicted RBP34.55■■■■□ 3.12
NME3-203ENST00000563367 DDX55Q8NHQ9 600 aaKnown RBP eCLIP34.55■■■■□ 3.122e-7■■■■□ 21.2
NME3-203ENST00000563367 LRRCC1Q9C099 1032 aa34.55■■■■□ 3.12
NME3-203ENST00000563367 DDX4Q9NQI0 724 aaKnown RBP34.55■■■■□ 3.12
NME3-203ENST00000563367 PRDM10Q9NQV6 1147 aa34.55■■■■□ 3.12
NME3-203ENST00000563367 MIGA2Q7L4E1 593 aa34.54■■■■□ 3.12
NME3-203ENST00000563367 ADGRA1Q86SQ6 560 aa34.54■■■■□ 3.12
NME3-203ENST00000563367 REM2Q8IYK8 340 aaPredicted RBP34.54■■■■□ 3.12
NME3-203ENST00000563367 WNK4Q96J92 1243 aa34.54■■■■□ 3.12
NME3-203ENST00000563367 ENTPD3O75355 529 aa34.53■■■■□ 3.12
NME3-203ENST00000563367 MAP3K9P80192 1104 aa34.53■■■■□ 3.12
NME3-203ENST00000563367 HOOK2Q96ED9 719 aa34.53■■■■□ 3.12
NME3-203ENST00000563367 ELP3Q9H9T3 547 aa34.53■■■■□ 3.12
NME3-203ENST00000563367 RNF186Q9NXI6 227 aa34.53■■■■□ 3.12
NME3-203ENST00000563367 CASP8AP2Q9UKL3 1982 aa34.53■■■■□ 3.12
NME3-203ENST00000563367 GJA5P36382 358 aa34.52■■■■□ 3.12
NME3-203ENST00000563367 PICALMQ13492 652 aa34.52■■■■□ 3.12
NME3-203ENST00000563367 SH3BP5LQ7L8J4 393 aa34.52■■■■□ 3.12
NME3-203ENST00000563367 VGLL4Q14135 290 aa34.51■■■■□ 3.12
NME3-203ENST00000563367 DCAF15Q66K64 600 aa34.51■■■■□ 3.12
NME3-203ENST00000563367 TRPA1O75762 1119 aa34.5■■■■□ 3.11
NME3-203ENST00000563367 IDH1O75874 414 aaKnown RBP34.5■■■■□ 3.11
NME3-203ENST00000563367 TM4SF4P48230 202 aa34.5■■■■□ 3.11
NME3-203ENST00000563367 FOCADQ5VW36 1801 aa34.49■■■■□ 3.11
NME3-203ENST00000563367 ZBTB48P10074 688 aaPredicted RBP34.49■■■■□ 3.11
NME3-203ENST00000563367 SH3RF3Q8TEJ3 882 aaPredicted RBP34.49■■■■□ 3.11
NME3-203ENST00000563367 PPIL4Q8WUA2 492 aaKnown RBP eCLIP34.49■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms