RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.86■■□□□ 1.25
CDH11-206ENST00000562998 RFX7Q2KHR2 1363 aa22.86■■□□□ 1.25
CDH11-206ENST00000562998 GPR75-ASB3A0A0A6YYF3 556 aa22.85■■□□□ 1.25
CDH11-206ENST00000562998 TNNI2P48788 182 aa22.85■■□□□ 1.25
CDH11-206ENST00000562998 SUPT20HL1Q3ZLR7 823 aa22.85■■□□□ 1.25
CDH11-206ENST00000562998 TMEM39BQ9GZU3 492 aa22.85■■□□□ 1.25
CDH11-206ENST00000562998 SUPT16HQ9Y5B9 1047 aaKnown RBP22.85■■□□□ 1.25
CDH11-206ENST00000562998 MAST2Q6P0Q8 1798 aa22.85■■□□□ 1.25
CDH11-206ENST00000562998 RPAP1Q9BWH6 1393 aaPredicted RBP22.85■■□□□ 1.25
CDH11-206ENST00000562998 UBE2Q2LH0YL09 131 aa22.84■■□□□ 1.25
CDH11-206ENST00000562998 IFIT2P09913 472 aaKnown RBP22.84■■□□□ 1.25
CDH11-206ENST00000562998 MAP2K2P36507 400 aa22.84■■□□□ 1.25
CDH11-206ENST00000562998 PIH1D3Q9NQM4 214 aaKnown RBP22.84■■□□□ 1.25
CDH11-206ENST00000562998 TMOD2Q9NZR1 351 aa22.84■■□□□ 1.25
CDH11-206ENST00000562998 LRP2BPQ9P2M1 347 aa22.84■■□□□ 1.25
CDH11-206ENST00000562998 DOCK2Q92608 1830 aa22.84■■□□□ 1.25
CDH11-206ENST00000562998 RHBDL3P58872 404 aa22.83■■□□□ 1.25
CDH11-206ENST00000562998 NFIAQ12857 509 aa22.83■■□□□ 1.25
CDH11-206ENST00000562998 CCDC102AQ96A19 550 aa22.83■■□□□ 1.25
CDH11-206ENST00000562998 IDI2Q9BXS1 227 aa22.83■■□□□ 1.25
CDH11-206ENST00000562998 USP40Q9NVE5 1235 aa22.83■■□□□ 1.25
CDH11-206ENST00000562998 RAI14Q9P0K7 980 aa22.83■■□□□ 1.25
CDH11-206ENST00000562998 FAM198AQ9UFP1 575 aa22.83■■□□□ 1.25
CDH11-206ENST00000562998 SMARCA5O60264 1052 aaPredicted RBP22.82■■□□□ 1.24
CDH11-206ENST00000562998 AOC2O75106 756 aa22.82■■□□□ 1.24
CDH11-206ENST00000562998 USP2O75604 605 aaPredicted RBP22.82■■□□□ 1.24
CDH11-206ENST00000562998 LDHCP07864 332 aa22.82■■□□□ 1.24
CDH11-206ENST00000562998 SLC10A3P09131 477 aa22.82■■□□□ 1.24
CDH11-206ENST00000562998 BTDP43251 543 aa22.82■■□□□ 1.24
CDH11-206ENST00000562998 GSTO1P78417 241 aa22.82■■□□□ 1.24
CDH11-206ENST00000562998 HDAC1Q13547 482 aaPredicted RBP22.82■■□□□ 1.24
CDH11-206ENST00000562998 PAXIP1Q6ZW49 1069 aaPredicted RBP22.82■■□□□ 1.24
CDH11-206ENST00000562998 ARMC9Q7Z3E5 817 aa22.82■■□□□ 1.24
CDH11-206ENST00000562998 FAM151AQ8WW52 585 aa22.82■■□□□ 1.24
CDH11-206ENST00000562998 WBP1LQ9NX94 342 aa22.82■■□□□ 1.24
CDH11-206ENST00000562998 FZD1Q9UP38 647 aa22.82■■□□□ 1.24
CDH11-206ENST00000562998 NDUFB9Q9Y6M9 179 aa22.82■■□□□ 1.24
CDH11-206ENST00000562998 UNCXA6NJT0 531 aa22.81■■□□□ 1.24
CDH11-206ENST00000562998 ZNF157P51786 506 aaPredicted RBP22.81■■□□□ 1.24
CDH11-206ENST00000562998 NOGQ13253 232 aa22.81■■□□□ 1.24
CDH11-206ENST00000562998 RASAL3Q86YV0 1011 aa22.81■■□□□ 1.24
CDH11-206ENST00000562998 ANTXR1Q9H6X2 564 aa22.81■■□□□ 1.24
CDH11-206ENST00000562998 ANGEL1Q9UNK9 670 aaKnown RBP22.81■■□□□ 1.24
CDH11-206ENST00000562998 PPP1R12BO60237 982 aaPredicted RBP22.8■■□□□ 1.24
CDH11-206ENST00000562998 WDHD1O75717 1129 aaPredicted RBP22.8■■□□□ 1.24
CDH11-206ENST00000562998 MAP4K4O95819 1239 aaPredicted RBP22.8■■□□□ 1.24
CDH11-206ENST00000562998 ATP5JP18859 108 aa22.8■■□□□ 1.24
CDH11-206ENST00000562998 EXOC6Q8TAG9 804 aa22.8■■□□□ 1.24
CDH11-206ENST00000562998 ZIC5Q96T25 663 aa22.8■■□□□ 1.24
CDH11-206ENST00000562998 ENTPD3O75355 529 aa22.79■■□□□ 1.24
CDH11-206ENST00000562998 NPM3O75607 178 aaKnown RBP22.79■■□□□ 1.24
CDH11-206ENST00000562998 HSPA1AP0DMV8 641 aaKnown RBP22.79■■□□□ 1.24
CDH11-206ENST00000562998 HSPA1BP0DMV9 641 aaKnown RBP22.79■■□□□ 1.24
CDH11-206ENST00000562998 PRKG1Q13976 671 aa22.79■■□□□ 1.24
CDH11-206ENST00000562998 TTLL12Q14166 644 aaPredicted RBP22.79■■□□□ 1.24
CDH11-206ENST00000562998 NAA16Q6N069 864 aaPredicted RBP22.79■■□□□ 1.24
CDH11-206ENST00000562998 ADGRA1Q86SQ6 560 aa22.79■■□□□ 1.24
CDH11-206ENST00000562998 OTOFQ9HC10 1997 aa22.78■■□□□ 1.24
CDH11-206ENST00000562998 PPP4CP60510 307 aa22.78■■□□□ 1.24
CDH11-206ENST00000562998 MAP2K1Q02750 393 aaPredicted RBP22.78■■□□□ 1.24
CDH11-206ENST00000562998 GRM1Q13255 1194 aa22.78■■□□□ 1.24
CDH11-206ENST00000562998 TMED8Q6PL24 325 aaPredicted RBP22.78■■□□□ 1.24
CDH11-206ENST00000562998 ZFPM1Q8IX07 1006 aa22.78■■□□□ 1.24
CDH11-206ENST00000562998 RGS3P49796 1198 aa22.77■■□□□ 1.24
CDH11-206ENST00000562998 DDX4Q9NQI0 724 aaKnown RBP22.77■■□□□ 1.24
CDH11-206ENST00000562998 ATRNL1Q5VV63 1379 aa22.76■■□□□ 1.23
CDH11-206ENST00000562998 TCP10Q12799 353 aa22.76■■□□□ 1.23
CDH11-206ENST00000562998 TTF1Q15361 905 aaPredicted RBP22.76■■□□□ 1.23
CDH11-206ENST00000562998 HAUS7Q99871 368 aa22.76■■□□□ 1.23
CDH11-206ENST00000562998 IREB2P48200 963 aaKnown RBP22.75■■□□□ 1.23
CDH11-206ENST00000562998 SH3BP5LQ7L8J4 393 aa22.75■■□□□ 1.23
CDH11-206ENST00000562998 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.75■■□□□ 1.23
CDH11-206ENST00000562998 CLMNQ96JQ2 1002 aa22.75■■□□□ 1.23
CDH11-206ENST00000562998 LAMB1P07942 1786 aa22.75■■□□□ 1.23
CDH11-206ENST00000562998 COL2A1P02458 1487 aaPredicted RBP22.74■■□□□ 1.23
CDH11-206ENST00000562998 IDH1O75874 414 aaKnown RBP22.74■■□□□ 1.23
CDH11-206ENST00000562998 KIF23Q02241 960 aaPredicted RBP22.74■■□□□ 1.23
CDH11-206ENST00000562998 MAP3K10Q02779 954 aa22.74■■□□□ 1.23
CDH11-206ENST00000562998 MAP3K12Q12852 859 aa22.74■■□□□ 1.23
CDH11-206ENST00000562998 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.74■■□□□ 1.23
CDH11-206ENST00000562998 ANKRD13AQ8IZ07 590 aa22.74■■□□□ 1.23
CDH11-206ENST00000562998 GCC1Q96CN9 775 aa22.74■■□□□ 1.23
CDH11-206ENST00000562998 HOOK2Q96ED9 719 aa22.74■■□□□ 1.23
CDH11-206ENST00000562998 BOLA2Q9H3K6 86 aa22.74■■□□□ 1.23
CDH11-206ENST00000562998 ECHDC1Q9NTX5 307 aa22.74■■□□□ 1.23
CDH11-206ENST00000562998 CDK5RAP2Q96SN8 1893 aa22.73■■□□□ 1.23
CDH11-206ENST00000562998 CYP7A1P22680 504 aa22.73■■□□□ 1.23
CDH11-206ENST00000562998 SH3RF3Q8TEJ3 882 aaPredicted RBP22.73■■□□□ 1.23
CDH11-206ENST00000562998 EDC3Q96F86 508 aaKnown RBP22.73■■□□□ 1.23
CDH11-206ENST00000562998 SALL3Q9BXA9 1300 aa22.73■■□□□ 1.23
CDH11-206ENST00000562998 FOCADQ5VW36 1801 aa22.73■■□□□ 1.23
CDH11-206ENST00000562998 GOLIM4O00461 696 aa22.72■■□□□ 1.23
CDH11-206ENST00000562998 FOXN1O15353 648 aa22.72■■□□□ 1.23
CDH11-206ENST00000562998 BAG3O95817 575 aa22.72■■□□□ 1.23
CDH11-206ENST00000562998 SPRYD7Q5W111 196 aa22.72■■□□□ 1.23
CDH11-206ENST00000562998 SMC5Q8IY18 1101 aa22.72■■□□□ 1.23
CDH11-206ENST00000562998 MAGEB6Q8N7X4 407 aa22.72■■□□□ 1.23
CDH11-206ENST00000562998 CSRNP1Q96S65 589 aa22.72■■□□□ 1.23
CDH11-206ENST00000562998 DNAJC2Q99543 621 aaKnown RBP22.72■■□□□ 1.23
CDH11-206ENST00000562998 BCL11AQ9H165 835 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms