RNA–Protein interactions for RNA: ENST00000562477.1

TMEM249-202, Transcript of transmembrane protein 249, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TMEM249, Length 725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-202ENST00000562477 MECOMQ03112 1051 aa23.74■■□□□ 1.39
TMEM249-202ENST00000562477 HSP90AB4PQ58FF6 505 aa23.74■■□□□ 1.39
TMEM249-202ENST00000562477 LDLRAD1Q5T700 205 aa23.74■■□□□ 1.39
TMEM249-202ENST00000562477 SPTY2D1Q68D10 685 aaPredicted RBP23.74■■□□□ 1.39
TMEM249-202ENST00000562477 BCL11AQ9H165 835 aa23.74■■□□□ 1.39
TMEM249-202ENST00000562477 GAKO14976 1311 aa23.74■■□□□ 1.39
TMEM249-202ENST00000562477 TNNI2P48788 182 aa23.73■■□□□ 1.39
TMEM249-202ENST00000562477 NFIAQ12857 509 aa23.73■■□□□ 1.39
TMEM249-202ENST00000562477 CLMNQ96JQ2 1002 aa23.73■■□□□ 1.39
TMEM249-202ENST00000562477 USP40Q9NVE5 1235 aa23.73■■□□□ 1.39
TMEM249-202ENST00000562477 USP2O75604 605 aaPredicted RBP23.72■■□□□ 1.39
TMEM249-202ENST00000562477 MKRN3Q13064 507 aaKnown RBP23.72■■□□□ 1.39
TMEM249-202ENST00000562477 MAP3K11Q16584 847 aa23.72■■□□□ 1.39
TMEM249-202ENST00000562477 COL13A1Q5TAT6 717 aaPredicted RBP23.72■■□□□ 1.39
TMEM249-202ENST00000562477 RAI14Q9P0K7 980 aa23.72■■□□□ 1.39
TMEM249-202ENST00000562477 TSKSQ9UJT2 592 aa23.72■■□□□ 1.39
TMEM249-202ENST00000562477 MYH2Q9UKX2 1941 aa23.72■■□□□ 1.39
TMEM249-202ENST00000562477 PPP1R12BO60237 982 aaPredicted RBP23.71■■□□□ 1.39
TMEM249-202ENST00000562477 HSPA8P11142 646 aaKnown RBP23.71■■□□□ 1.39
TMEM249-202ENST00000562477 ZAP70P43403 619 aa23.71■■□□□ 1.39
TMEM249-202ENST00000562477 CTCFP49711 727 aaPredicted RBP23.71■■□□□ 1.39
TMEM249-202ENST00000562477 FKBP1CQ5VVH2 108 aa23.71■■□□□ 1.39
TMEM249-202ENST00000562477 NSUN4Q96CB9 384 aaKnown RBP23.71■■□□□ 1.39
TMEM249-202ENST00000562477 KIF1BPQ96EK5 621 aa23.71■■□□□ 1.39
TMEM249-202ENST00000562477 NDUFB9Q9Y6M9 179 aa23.71■■□□□ 1.39
TMEM249-202ENST00000562477 AKAP11Q9UKA4 1901 aa23.71■■□□□ 1.39
TMEM249-202ENST00000562477 MROH7-TTC4A0A0A0MT08 1334 aa23.7■■□□□ 1.38
TMEM249-202ENST00000562477 CYP2E1P05181 493 aaPredicted RBP23.7■■□□□ 1.38
TMEM249-202ENST00000562477 TCP10Q12799 353 aa23.7■■□□□ 1.38
TMEM249-202ENST00000562477 FAM83AQ86UY5 434 aa23.7■■□□□ 1.38
TMEM249-202ENST00000562477 ZNF512BQ96KM6 892 aaPredicted RBP23.7■■□□□ 1.38
TMEM249-202ENST00000562477 PIH1D3Q9NQM4 214 aaKnown RBP23.7■■□□□ 1.38
TMEM249-202ENST00000562477 FAM198AQ9UFP1 575 aa23.7■■□□□ 1.38
TMEM249-202ENST00000562477 BTDP43251 543 aa23.69■■□□□ 1.38
TMEM249-202ENST00000562477 LBX1P52954 281 aa23.69■■□□□ 1.38
TMEM249-202ENST00000562477 ZFPM1Q8IX07 1006 aa23.69■■□□□ 1.38
TMEM249-202ENST00000562477 FAM163AQ96GL9 167 aaPredicted RBP23.69■■□□□ 1.38
TMEM249-202ENST00000562477 CSRNP1Q96S65 589 aa23.69■■□□□ 1.38
TMEM249-202ENST00000562477 CRBNQ96SW2 442 aa23.69■■□□□ 1.38
TMEM249-202ENST00000562477 BEGAINQ9BUH8 593 aa23.69■■□□□ 1.38
TMEM249-202ENST00000562477 LRP2BPQ9P2M1 347 aa23.69■■□□□ 1.38
TMEM249-202ENST00000562477 RAB11FIP3O75154 756 aa23.68■■□□□ 1.38
TMEM249-202ENST00000562477 IREB2P48200 963 aaKnown RBP23.68■■□□□ 1.38
TMEM249-202ENST00000562477 PCDHB15Q9Y5E8 787 aa23.68■■□□□ 1.38
TMEM249-202ENST00000562477 SLF2Q8IX21 1173 aa23.67■■□□□ 1.38
TMEM249-202ENST00000562477 CLASRPQ8N2M8 674 aaKnown RBP23.67■■□□□ 1.38
TMEM249-202ENST00000562477 FAM151AQ8WW52 585 aa23.67■■□□□ 1.38
TMEM249-202ENST00000562477 SLC10A4Q96EP9 437 aa23.67■■□□□ 1.38
TMEM249-202ENST00000562477 GPR75-ASB3A0A0A6YYF3 556 aa23.66■■□□□ 1.38
TMEM249-202ENST00000562477 SMARCA5O60264 1052 aaPredicted RBP23.66■■□□□ 1.38
TMEM249-202ENST00000562477 RGS3P49796 1198 aa23.66■■□□□ 1.38
TMEM249-202ENST00000562477 DDX4Q9NQI0 724 aaKnown RBP23.66■■□□□ 1.38
TMEM249-202ENST00000562477 RFX7Q2KHR2 1363 aa23.65■■□□□ 1.38
TMEM249-202ENST00000562477 WDHD1O75717 1129 aaPredicted RBP23.65■■□□□ 1.38
TMEM249-202ENST00000562477 RHBDL3P58872 404 aa23.65■■□□□ 1.38
TMEM249-202ENST00000562477 GSTO1P78417 241 aa23.65■■□□□ 1.38
TMEM249-202ENST00000562477 SPRYD7Q5W111 196 aa23.65■■□□□ 1.38
TMEM249-202ENST00000562477 ANTXR1Q9H6X2 564 aa23.65■■□□□ 1.38
TMEM249-202ENST00000562477 RPAP1Q9BWH6 1393 aaPredicted RBP23.65■■□□□ 1.38
TMEM249-202ENST00000562477 IFIT2P09913 472 aaKnown RBP23.64■■□□□ 1.37
TMEM249-202ENST00000562477 GJA5P36382 358 aa23.64■■□□□ 1.37
TMEM249-202ENST00000562477 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.64■■□□□ 1.37
TMEM249-202ENST00000562477 MIGA2Q7L4E1 593 aa23.64■■□□□ 1.37
TMEM249-202ENST00000562477 WNK4Q96J92 1243 aa23.64■■□□□ 1.37
TMEM249-202ENST00000562477 IDI2Q9BXS1 227 aa23.64■■□□□ 1.37
TMEM249-202ENST00000562477 LDHCP07864 332 aa23.63■■□□□ 1.37
TMEM249-202ENST00000562477 NAA16Q6N069 864 aaPredicted RBP23.63■■□□□ 1.37
TMEM249-202ENST00000562477 ADGRA1Q86SQ6 560 aa23.63■■□□□ 1.37
TMEM249-202ENST00000562477 ANKRD13AQ8IZ07 590 aa23.63■■□□□ 1.37
TMEM249-202ENST00000562477 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.63■■□□□ 1.37
TMEM249-202ENST00000562477 ELP3Q9H9T3 547 aa23.63■■□□□ 1.37
TMEM249-202ENST00000562477 PRDM10Q9NQV6 1147 aa23.63■■□□□ 1.37
TMEM249-202ENST00000562477 MYO5AQ9Y4I1 1855 aaKnown RBP23.63■■□□□ 1.37
TMEM249-202ENST00000562477 OTOFQ9HC10 1997 aa23.63■■□□□ 1.37
TMEM249-202ENST00000562477 MAP3K9P80192 1104 aa23.62■■□□□ 1.37
TMEM249-202ENST00000562477 PICALMQ13492 652 aa23.62■■□□□ 1.37
TMEM249-202ENST00000562477 VGLL4Q14135 290 aa23.62■■□□□ 1.37
TMEM249-202ENST00000562477 SH3BP5LQ7L8J4 393 aa23.62■■□□□ 1.37
TMEM249-202ENST00000562477 CNKSR2Q8WXI2 1034 aa23.62■■□□□ 1.37
TMEM249-202ENST00000562477 RNF186Q9NXI6 227 aa23.62■■□□□ 1.37
TMEM249-202ENST00000562477 CA12O43570 354 aa23.61■■□□□ 1.37
TMEM249-202ENST00000562477 TRPA1O75762 1119 aa23.61■■□□□ 1.37
TMEM249-202ENST00000562477 IDH1O75874 414 aaKnown RBP23.61■■□□□ 1.37
TMEM249-202ENST00000562477 WRNIP1Q96S55 665 aa23.61■■□□□ 1.37
TMEM249-202ENST00000562477 LRRCC1Q9C099 1032 aa23.61■■□□□ 1.37
TMEM249-202ENST00000562477 DCTPP1Q9H773 170 aa23.61■■□□□ 1.37
TMEM249-202ENST00000562477 ENTPD3O75355 529 aa23.6■■□□□ 1.37
TMEM249-202ENST00000562477 SLURP2P0DP57 97 aa23.6■■□□□ 1.37
TMEM249-202ENST00000562477 SH3RF3Q8TEJ3 882 aaPredicted RBP23.6■■□□□ 1.37
TMEM249-202ENST00000562477 DDTLA6NHG4 134 aaPredicted RBP23.59■■□□□ 1.37
TMEM249-202ENST00000562477 UNCXA6NJT0 531 aa23.59■■□□□ 1.37
TMEM249-202ENST00000562477 DCAF15Q66K64 600 aa23.59■■□□□ 1.37
TMEM249-202ENST00000562477 EDC3Q96F86 508 aaKnown RBP23.59■■□□□ 1.37
TMEM249-202ENST00000562477 AATFQ9NY61 560 aaKnown RBP eCLIP23.59■■□□□ 1.37
TMEM249-202ENST00000562477 AK9Q5TCS8 1911 aa23.59■■□□□ 1.37
TMEM249-202ENST00000562477 MAST2Q6P0Q8 1798 aa23.58■■□□□ 1.37
TMEM249-202ENST00000562477 ATRNL1Q5VV63 1379 aa23.58■■□□□ 1.37
TMEM249-202ENST00000562477 INPP5BP32019 993 aa23.58■■□□□ 1.37
TMEM249-202ENST00000562477 ZSCAN29Q8IWY8 852 aaPredicted RBP23.58■■□□□ 1.37
TMEM249-202ENST00000562477 TEX11Q8IYF3 940 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms