RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 CLMNQ96JQ2 1002 aa21.92■■□□□ 1.1
CMTM3-204ENST00000562357 CSADQ9Y600 493 aa21.92■■□□□ 1.1
CMTM3-204ENST00000562357 RPAP1Q9BWH6 1393 aaPredicted RBP21.91■■□□□ 1.1
CMTM3-204ENST00000562357 TM4SF4P48230 202 aa21.91■■□□□ 1.1
CMTM3-204ENST00000562357 INHBEP58166 350 aa21.91■■□□□ 1.1
CMTM3-204ENST00000562357 TNNI3KQ59H18 835 aa21.91■■□□□ 1.1
CMTM3-204ENST00000562357 DCAF15Q66K64 600 aa21.91■■□□□ 1.1
CMTM3-204ENST00000562357 SPATA5Q8NB90 893 aa21.91■■□□□ 1.1
CMTM3-204ENST00000562357 WNK4Q96J92 1243 aa21.91■■□□□ 1.1
CMTM3-204ENST00000562357 USP40Q9NVE5 1235 aa21.91■■□□□ 1.1
CMTM3-204ENST00000562357 NOP58Q9Y2X3 529 aaKnown RBP21.91■■□□□ 1.1
CMTM3-204ENST00000562357 FPGT-TNNI3KV9GXZ4 949 aa21.91■■□□□ 1.1
CMTM3-204ENST00000562357 ARID4AP29374 1257 aaPredicted RBP21.9■■□□□ 1.1
CMTM3-204ENST00000562357 TTC39AQ5SRH9 613 aa21.9■■□□□ 1.1
CMTM3-204ENST00000562357 CDC42EP5Q6NZY7 148 aa21.9■■□□□ 1.1
CMTM3-204ENST00000562357 ERC1Q8IUD2 1116 aa21.9■■□□□ 1.1
CMTM3-204ENST00000562357 CDAN1Q8IWY9 1227 aa21.9■■□□□ 1.1
CMTM3-204ENST00000562357 HMG20BQ9P0W2 317 aa21.9■■□□□ 1.1
CMTM3-204ENST00000562357 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.9■■□□□ 1.1
CMTM3-204ENST00000562357 AKAP11Q9UKA4 1901 aa21.9■■□□□ 1.1
CMTM3-204ENST00000562357 ALDH1A1P00352 501 aa21.89■■□□□ 1.09
CMTM3-204ENST00000562357 GSTO1P78417 241 aa21.89■■□□□ 1.09
CMTM3-204ENST00000562357 MAP3K9P80192 1104 aa21.89■■□□□ 1.09
CMTM3-204ENST00000562357 HSP90AB4PQ58FF6 505 aa21.89■■□□□ 1.09
CMTM3-204ENST00000562357 FAM151AQ8WW52 585 aa21.89■■□□□ 1.09
CMTM3-204ENST00000562357 COG6Q9Y2V7 657 aa21.89■■□□□ 1.09
CMTM3-204ENST00000562357 GAKO14976 1311 aa21.88■■□□□ 1.09
CMTM3-204ENST00000562357 HMMRO75330 724 aa21.88■■□□□ 1.09
CMTM3-204ENST00000562357 TCP10Q12799 353 aa21.88■■□□□ 1.09
CMTM3-204ENST00000562357 ELP3Q9H9T3 547 aa21.88■■□□□ 1.09
CMTM3-204ENST00000562357 RAI14Q9P0K7 980 aa21.88■■□□□ 1.09
CMTM3-204ENST00000562357 LDHCP07864 332 aa21.87■■□□□ 1.09
CMTM3-204ENST00000562357 OTUD7BQ6GQQ9 843 aa21.87■■□□□ 1.09
CMTM3-204ENST00000562357 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.87■■□□□ 1.09
CMTM3-204ENST00000562357 DBNDD2Q9BQY9 259 aa21.87■■□□□ 1.09
CMTM3-204ENST00000562357 LRP2BPQ9P2M1 347 aa21.87■■□□□ 1.09
CMTM3-204ENST00000562357 MROH7-TTC4A0A0A0MT08 1334 aa21.86■■□□□ 1.09
CMTM3-204ENST00000562357 SLC34A2O95436 690 aa21.86■■□□□ 1.09
CMTM3-204ENST00000562357 MECOMQ03112 1051 aa21.86■■□□□ 1.09
CMTM3-204ENST00000562357 VGLL4Q14135 290 aa21.86■■□□□ 1.09
CMTM3-204ENST00000562357 RPAP2Q8IXW5 612 aaPredicted RBP21.86■■□□□ 1.09
CMTM3-204ENST00000562357 OPTNQ96CV9 577 aa21.86■■□□□ 1.09
CMTM3-204ENST00000562357 FAM163AQ96GL9 167 aaPredicted RBP21.86■■□□□ 1.09
CMTM3-204ENST00000562357 WRNIP1Q96S55 665 aa21.86■■□□□ 1.09
CMTM3-204ENST00000562357 ZNF341Q9BYN7 854 aa21.86■■□□□ 1.09
CMTM3-204ENST00000562357 MCAMP43121 646 aa21.85■■□□□ 1.09
CMTM3-204ENST00000562357 BTDP43251 543 aa21.85■■□□□ 1.09
CMTM3-204ENST00000562357 NFIAQ12857 509 aa21.85■■□□□ 1.09
CMTM3-204ENST00000562357 DGKZQ13574 1117 aa21.85■■□□□ 1.09
CMTM3-204ENST00000562357 PI16Q6UXB8 463 aa21.85■■□□□ 1.09
CMTM3-204ENST00000562357 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.85■■□□□ 1.09
CMTM3-204ENST00000562357 ABHD8Q96I13 439 aa21.85■■□□□ 1.09
CMTM3-204ENST00000562357 NOL10Q9BSC4 688 aaKnown RBP21.85■■□□□ 1.09
CMTM3-204ENST00000562357 EXOC6BQ9Y2D4 811 aa21.85■■□□□ 1.09
CMTM3-204ENST00000562357 TBC1D8O95759 1140 aa21.84■■□□□ 1.09
CMTM3-204ENST00000562357 ZSCAN29Q8IWY8 852 aaPredicted RBP21.84■■□□□ 1.09
CMTM3-204ENST00000562357 ENTPD3O75355 529 aa21.83■■□□□ 1.09
CMTM3-204ENST00000562357 RGS3P49796 1198 aa21.83■■□□□ 1.09
CMTM3-204ENST00000562357 PDE3AQ14432 1141 aa21.83■■□□□ 1.09
CMTM3-204ENST00000562357 TBC1D9Q6ZT07 1266 aa21.83■■□□□ 1.09
CMTM3-204ENST00000562357 MIGA2Q7L4E1 593 aa21.83■■□□□ 1.09
CMTM3-204ENST00000562357 IFNL1Q8IU54 200 aa21.83■■□□□ 1.09
CMTM3-204ENST00000562357 ZNF512BQ96KM6 892 aaPredicted RBP21.83■■□□□ 1.09
CMTM3-204ENST00000562357 IDI2Q9BXS1 227 aa21.83■■□□□ 1.09
CMTM3-204ENST00000562357 ZBTB40Q9NUA8 1239 aa21.83■■□□□ 1.09
CMTM3-204ENST00000562357 CASP8AP2Q9UKL3 1982 aa21.82■■□□□ 1.08
CMTM3-204ENST00000562357 MAP4K4O95819 1239 aaPredicted RBP21.82■■□□□ 1.08
CMTM3-204ENST00000562357 OTUD5Q96G74 571 aa21.82■■□□□ 1.08
CMTM3-204ENST00000562357 MCOLN1Q9GZU1 580 aa21.82■■□□□ 1.08
CMTM3-204ENST00000562357 CCDC8Q9H0W5 538 aaPredicted RBP21.82■■□□□ 1.08
CMTM3-204ENST00000562357 SNRKQ9NRH2 765 aa21.82■■□□□ 1.08
CMTM3-204ENST00000562357 FAM198AQ9UFP1 575 aa21.82■■□□□ 1.08
CMTM3-204ENST00000562357 DBNLQ9UJU6 430 aaKnown RBP21.82■■□□□ 1.08
CMTM3-204ENST00000562357 GPR75-ASB3A0A0A6YYF3 556 aa21.81■■□□□ 1.08
CMTM3-204ENST00000562357 GTF2A2P52657 109 aa21.81■■□□□ 1.08
CMTM3-204ENST00000562357 NOM1Q5C9Z4 860 aaKnown RBP21.81■■□□□ 1.08
CMTM3-204ENST00000562357 AACSQ86V21 672 aa21.81■■□□□ 1.08
CMTM3-204ENST00000562357 ERO1BQ86YB8 467 aa21.81■■□□□ 1.08
CMTM3-204ENST00000562357 NSUN4Q96CB9 384 aaKnown RBP21.81■■□□□ 1.08
CMTM3-204ENST00000562357 CFHR5Q9BXR6 569 aa21.81■■□□□ 1.08
CMTM3-204ENST00000562357 MYH2Q9UKX2 1941 aa21.8■■□□□ 1.08
CMTM3-204ENST00000562357 SPDYE5A6NIY4 337 aa21.8■■□□□ 1.08
CMTM3-204ENST00000562357 GPR25O00155 361 aa21.8■■□□□ 1.08
CMTM3-204ENST00000562357 IGSF3O75054 1194 aa21.8■■□□□ 1.08
CMTM3-204ENST00000562357 GJA5P36382 358 aa21.8■■□□□ 1.08
CMTM3-204ENST00000562357 PICALMQ13492 652 aa21.8■■□□□ 1.08
CMTM3-204ENST00000562357 NAA16Q6N069 864 aaPredicted RBP21.8■■□□□ 1.08
CMTM3-204ENST00000562357 EAF2Q96CJ1 260 aaPredicted RBP21.8■■□□□ 1.08
CMTM3-204ENST00000562357 SNCAIPQ9Y6H5 919 aa21.8■■□□□ 1.08
CMTM3-204ENST00000562357 OTOFQ9HC10 1997 aa21.79■■□□□ 1.08
CMTM3-204ENST00000562357 WDHD1O75717 1129 aaPredicted RBP21.79■■□□□ 1.08
CMTM3-204ENST00000562357 BAG3O95817 575 aa21.79■■□□□ 1.08
CMTM3-204ENST00000562357 CTU1Q7Z7A3 348 aaKnown RBP21.79■■□□□ 1.08
CMTM3-204ENST00000562357 CLASRPQ8N2M8 674 aaKnown RBP21.79■■□□□ 1.08
CMTM3-204ENST00000562357 ZNF296Q8WUU4 475 aaPredicted RBP21.79■■□□□ 1.08
CMTM3-204ENST00000562357 ZKSCAN4Q969J2 545 aaPredicted RBP21.79■■□□□ 1.08
CMTM3-204ENST00000562357 KIF1BPQ96EK5 621 aa21.79■■□□□ 1.08
CMTM3-204ENST00000562357 CCL15-CCL14A0A0B4J2E2 113 aa21.78■■□□□ 1.08
CMTM3-204ENST00000562357 IGF2BP3O00425 579 aaKnown RBP eCLIP21.78■■□□□ 1.08
CMTM3-204ENST00000562357 CCL15Q16663 113 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms