RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 LACTBP83111 547 aaPredicted RBP12.88□□□□□ -0.35
BBS4-205ENST00000562219 SLC4A8Q2Y0W8 1093 aa12.88□□□□□ -0.35
BBS4-205ENST00000562219 KLHDC4Q8TBB5 520 aa12.88□□□□□ -0.35
BBS4-205ENST00000562219 DOCK1Q14185 1865 aa12.88□□□□□ -0.35
BBS4-205ENST00000562219 ZNF521Q96K83 1311 aa12.88□□□□□ -0.35
BBS4-205ENST00000562219 FGFR2P21802 821 aa12.87□□□□□ -0.35
BBS4-205ENST00000562219 FAM9BQ8IZU0 186 aa12.87□□□□□ -0.35
BBS4-205ENST00000562219 MRPL50Q8N5N7 158 aaKnown RBP12.87□□□□□ -0.35
BBS4-205ENST00000562219 ZNF341Q9BYN7 854 aa12.87□□□□□ -0.35
BBS4-205ENST00000562219 ARHGAP39Q9C0H5 1083 aa12.87□□□□□ -0.35
BBS4-205ENST00000562219 PHIPQ8WWQ0 1821 aa12.87□□□□□ -0.35
BBS4-205ENST00000562219 SLC5A1P13866 664 aa12.86□□□□□ -0.35
BBS4-205ENST00000562219 PRMT2P55345 433 aa12.86□□□□□ -0.35
BBS4-205ENST00000562219 PPATQ06203 517 aa12.86□□□□□ -0.35
BBS4-205ENST00000562219 WDR66Q8TBY9 1149 aa12.86□□□□□ -0.35
BBS4-205ENST00000562219 SH3TC2Q8TF17 1288 aa12.86□□□□□ -0.35
BBS4-205ENST00000562219 USP44Q9H0E7 712 aa12.86□□□□□ -0.35
BBS4-205ENST00000562219 MYCP01106 439 aaPredicted RBP12.85□□□□□ -0.35
BBS4-205ENST00000562219 MIGA2Q7L4E1 593 aa12.85□□□□□ -0.35
BBS4-205ENST00000562219 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.85□□□□□ -0.35
BBS4-205ENST00000562219 FAM151AQ8WW52 585 aa12.85□□□□□ -0.35
BBS4-205ENST00000562219 LPIN2Q92539 896 aa12.85□□□□□ -0.35
BBS4-205ENST00000562219 DAGLAQ9Y4D2 1042 aa12.85□□□□□ -0.35
BBS4-205ENST00000562219 ATAD5Q96QE3 1844 aa12.85□□□□□ -0.35
BBS4-205ENST00000562219 TRIOBPQ9H2D6 2365 aa12.85□□□□□ -0.35
BBS4-205ENST00000562219 ADGRA2Q96PE1 1338 aa12.85□□□□□ -0.35
BBS4-205ENST00000562219 EYA2O00167 538 aa12.84□□□□□ -0.35
BBS4-205ENST00000562219 INPP5BP32019 993 aa12.84□□□□□ -0.35
BBS4-205ENST00000562219 ZEB1P37275 1124 aaPredicted RBP12.84□□□□□ -0.35
BBS4-205ENST00000562219 FXR1P51114 621 aaKnown RBP eCLIP12.84□□□□□ -0.35
BBS4-205ENST00000562219 C17orf99Q6UX52 265 aa12.84□□□□□ -0.35
BBS4-205ENST00000562219 ANKRD23Q86SG2 305 aa12.84□□□□□ -0.35
BBS4-205ENST00000562219 KCNH4Q9UQ05 1017 aa12.84□□□□□ -0.35
BBS4-205ENST00000562219 PDHXO00330 501 aa12.83□□□□□ -0.36
BBS4-205ENST00000562219 RFX5P48382 616 aaPredicted RBP12.83□□□□□ -0.36
BBS4-205ENST00000562219 TCP10Q12799 353 aa12.83□□□□□ -0.36
BBS4-205ENST00000562219 DIXDC1Q155Q3 683 aa12.83□□□□□ -0.36
BBS4-205ENST00000562219 NOL9Q5SY16 702 aaKnown RBP12.83□□□□□ -0.36
BBS4-205ENST00000562219 CDC42EP5Q6NZY7 148 aa12.83□□□□□ -0.36
BBS4-205ENST00000562219 SSH1Q8WYL5 1049 aa12.83□□□□□ -0.36
BBS4-205ENST00000562219 CPA4Q9UI42 421 aa12.83□□□□□ -0.36
BBS4-205ENST00000562219 ZNF112Q9UJU3 913 aa12.83□□□□□ -0.36
BBS4-205ENST00000562219 DOCK3Q8IZD9 2030 aa12.83□□□□□ -0.36
BBS4-205ENST00000562219 CTGFP29279 349 aa12.82□□□□□ -0.36
BBS4-205ENST00000562219 PRDX5P30044 214 aa12.82□□□□□ -0.36
BBS4-205ENST00000562219 PSMC4P43686 418 aa12.82□□□□□ -0.36
BBS4-205ENST00000562219 NFIAQ12857 509 aa12.82□□□□□ -0.36
BBS4-205ENST00000562219 ATG9AQ7Z3C6 839 aa12.82□□□□□ -0.36
BBS4-205ENST00000562219 TRIM47Q96LD4 638 aa12.82□□□□□ -0.36
BBS4-205ENST00000562219 GNL3LQ9NVN8 582 aaKnown RBP12.82□□□□□ -0.36
BBS4-205ENST00000562219 SRRDQ9UH36 339 aa12.82□□□□□ -0.36
BBS4-205ENST00000562219 FBXO3Q9UK99 471 aa12.82□□□□□ -0.36
BBS4-205ENST00000562219 COLQQ9Y215 455 aaPredicted RBP12.82□□□□□ -0.36
BBS4-205ENST00000562219 SALL1Q9NSC2 1324 aa12.82□□□□□ -0.36
BBS4-205ENST00000562219 LOC285556D6RIA3 1793 aa12.81□□□□□ -0.36
BBS4-205ENST00000562219 E9PSI1 815 aa12.81□□□□□ -0.36
BBS4-205ENST00000562219 CIAO1O76071 339 aa12.81□□□□□ -0.36
BBS4-205ENST00000562219 ECM2O94769 699 aaPredicted RBP12.81□□□□□ -0.36
BBS4-205ENST00000562219 LDHBP07195 334 aaKnown RBP12.81□□□□□ -0.36
BBS4-205ENST00000562219 OSBPP22059 807 aa12.81□□□□□ -0.36
BBS4-205ENST00000562219 HOXD10P28358 340 aa12.81□□□□□ -0.36
BBS4-205ENST00000562219 MOGSQ13724 837 aa12.81□□□□□ -0.36
BBS4-205ENST00000562219 ATP2B3Q16720 1220 aa12.81□□□□□ -0.36
BBS4-205ENST00000562219 RAET1EQ8TD07 263 aa12.81□□□□□ -0.36
BBS4-205ENST00000562219 SHISA4Q96DD7 197 aa12.81□□□□□ -0.36
BBS4-205ENST00000562219 PARK7Q99497 189 aaKnown RBP12.81□□□□□ -0.36
BBS4-205ENST00000562219 FAM198AQ9UFP1 575 aa12.81□□□□□ -0.36
BBS4-205ENST00000562219 MYPNQ86TC9 1320 aa12.81□□□□□ -0.36
BBS4-205ENST00000562219 RFX7Q2KHR2 1363 aa12.81□□□□□ -0.36
BBS4-205ENST00000562219 ATRNL1Q5VV63 1379 aa12.81□□□□□ -0.36
BBS4-205ENST00000562219 H0YGN5 161 aa12.8□□□□□ -0.36
BBS4-205ENST00000562219 SEMA3EO15041 775 aa12.8□□□□□ -0.36
BBS4-205ENST00000562219 FMNL1O95466 1100 aaPredicted RBP12.8□□□□□ -0.36
BBS4-205ENST00000562219 GRK4P32298 578 aa12.8□□□□□ -0.36
BBS4-205ENST00000562219 MTFR1Q15390 333 aa12.8□□□□□ -0.36
BBS4-205ENST00000562219 ALDH1L2Q3SY69 923 aa12.8□□□□□ -0.36
BBS4-205ENST00000562219 NKX2-3Q8TAU0 364 aa12.8□□□□□ -0.36
BBS4-205ENST00000562219 SIL1Q9H173 461 aa12.8□□□□□ -0.36
BBS4-205ENST00000562219 USP40Q9NVE5 1235 aa12.8□□□□□ -0.36
BBS4-205ENST00000562219 CDK5RAP2Q96SN8 1893 aa12.79□□□□□ -0.36
BBS4-205ENST00000562219 ZNF316A6NFI3 1004 aaPredicted RBP12.79□□□□□ -0.36
BBS4-205ENST00000562219 CXCL11O14625 94 aa12.79□□□□□ -0.36
BBS4-205ENST00000562219 UBTFL1P0CB47 393 aaPredicted RBP12.79□□□□□ -0.36
BBS4-205ENST00000562219 BCRP11274 1271 aa12.79□□□□□ -0.36
BBS4-205ENST00000562219 CEP126Q9P2H0 1117 aa12.79□□□□□ -0.36
BBS4-205ENST00000562219 DENND2AQ9ULE3 1009 aa12.79□□□□□ -0.36
BBS4-205ENST00000562219 ALPK3Q96L96 1907 aa12.79□□□□□ -0.36
BBS4-205ENST00000562219 ZBTB22O15209 634 aa12.78□□□□□ -0.36
BBS4-205ENST00000562219 IL15P40933 162 aaPredicted RBP12.78□□□□□ -0.36
BBS4-205ENST00000562219 PHKA1P46020 1223 aa12.78□□□□□ -0.36
BBS4-205ENST00000562219 RGS3P49796 1198 aa12.78□□□□□ -0.36
BBS4-205ENST00000562219 FCGRTP55899 365 aa12.78□□□□□ -0.36
BBS4-205ENST00000562219 GPAT2Q6NUI2 795 aa12.78□□□□□ -0.36
BBS4-205ENST00000562219 ZFPM1Q8IX07 1006 aa12.78□□□□□ -0.36
BBS4-205ENST00000562219 SCYL3Q8IZE3 742 aa12.78□□□□□ -0.36
BBS4-205ENST00000562219 ZGPATQ8N5A5 531 aaKnown RBP12.78□□□□□ -0.36
BBS4-205ENST00000562219 SMC4Q9NTJ3 1288 aa12.78□□□□□ -0.36
BBS4-205ENST00000562219 GAKO14976 1311 aa12.78□□□□□ -0.36
BBS4-205ENST00000562219 MAST2Q6P0Q8 1798 aa12.78□□□□□ -0.36
BBS4-205ENST00000562219 FOCADQ5VW36 1801 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms