RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 LAMB1P07942 1786 aa10.24□□□□□ -0.77
GINS3-204ENST00000561952 IPO8O15397 1037 aaKnown RBP10.24□□□□□ -0.77
GINS3-204ENST00000561952 CIAO1O76071 339 aa10.24□□□□□ -0.77
GINS3-204ENST00000561952 GNAI3P08754 354 aa10.24□□□□□ -0.77
GINS3-204ENST00000561952 IL15P40933 162 aaPredicted RBP10.24□□□□□ -0.77
GINS3-204ENST00000561952 TM4SF4P48230 202 aa10.24□□□□□ -0.77
GINS3-204ENST00000561952 SOX10P56693 466 aa10.24□□□□□ -0.77
GINS3-204ENST00000561952 MAP3K11Q16584 847 aa10.24□□□□□ -0.77
GINS3-204ENST00000561952 INTS3Q68E01 1043 aaKnown RBP10.24□□□□□ -0.77
GINS3-204ENST00000561952 CTU1Q7Z7A3 348 aaKnown RBP10.24□□□□□ -0.77
GINS3-204ENST00000561952 ANKRD13AQ8IZ07 590 aa10.24□□□□□ -0.77
GINS3-204ENST00000561952 TMEM57Q8N5G2 664 aa10.24□□□□□ -0.77
GINS3-204ENST00000561952 WDR66Q8TBY9 1149 aa10.24□□□□□ -0.77
GINS3-204ENST00000561952 OPTNQ96CV9 577 aa10.24□□□□□ -0.77
GINS3-204ENST00000561952 TEPSINQ96N21 525 aa10.24□□□□□ -0.77
GINS3-204ENST00000561952 GNL3LQ9NVN8 582 aaKnown RBP10.24□□□□□ -0.77
GINS3-204ENST00000561952 HDAC5Q9UQL6 1122 aa10.24□□□□□ -0.77
GINS3-204ENST00000561952 CENPFP49454 3210 aa10.23□□□□□ -0.77
GINS3-204ENST00000561952 MANSC4A6NHS7 340 aaPredicted RBP10.23□□□□□ -0.77
GINS3-204ENST00000561952 GPR25O00155 361 aa10.23□□□□□ -0.77
GINS3-204ENST00000561952 IGF2BP3O00425 579 aaKnown RBP eCLIP10.23□□□□□ -0.77
GINS3-204ENST00000561952 LDHBP07195 334 aaKnown RBP10.23□□□□□ -0.77
GINS3-204ENST00000561952 TIMM10P62072 90 aa10.23□□□□□ -0.77
GINS3-204ENST00000561952 TCP10Q12799 353 aa10.23□□□□□ -0.77
GINS3-204ENST00000561952 TFCP2Q12800 502 aa10.23□□□□□ -0.77
GINS3-204ENST00000561952 VGLL4Q14135 290 aa10.23□□□□□ -0.77
GINS3-204ENST00000561952 APOBEC3HQ6NTF7 200 aaKnown RBP10.23□□□□□ -0.77
GINS3-204ENST00000561952 IFNL1Q8IU54 200 aa10.23□□□□□ -0.77
GINS3-204ENST00000561952 ARHGAP45Q92619 1136 aa10.23□□□□□ -0.77
GINS3-204ENST00000561952 ZDHHC15Q96MV8 337 aa10.23□□□□□ -0.77
GINS3-204ENST00000561952 NEUROD6Q96NK8 337 aa10.23□□□□□ -0.77
GINS3-204ENST00000561952 C1orf115Q9H7X2 142 aa10.23□□□□□ -0.77
GINS3-204ENST00000561952 COPRSQ9NQ92 184 aa10.23□□□□□ -0.77
GINS3-204ENST00000561952 DAGLAQ9Y4D2 1042 aa10.23□□□□□ -0.77
GINS3-204ENST00000561952 DOCK2Q92608 1830 aa10.23□□□□□ -0.77
GINS3-204ENST00000561952 PNMA6EA0A0J9YXQ4 647 aa10.22□□□□□ -0.77
GINS3-204ENST00000561952 A0A1B0GUL7 405 aa10.22□□□□□ -0.77
GINS3-204ENST00000561952 GNAI2P04899 355 aa10.22□□□□□ -0.77
GINS3-204ENST00000561952 ZBTB48P10074 688 aaPredicted RBP10.22□□□□□ -0.77
GINS3-204ENST00000561952 HDLBPQ00341 1268 aaKnown RBP10.22□□□□□ -0.77
GINS3-204ENST00000561952 ZKSCAN2Q63HK3 967 aa10.22□□□□□ -0.77
GINS3-204ENST00000561952 CCDC102BQ68D86 513 aa10.22□□□□□ -0.77
GINS3-204ENST00000561952 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.22□□□□□ -0.77
GINS3-204ENST00000561952 MIGA2Q7L4E1 593 aa10.22□□□□□ -0.77
GINS3-204ENST00000561952 FTSJ3Q8IY81 847 aaKnown RBP10.22□□□□□ -0.77
GINS3-204ENST00000561952 WRNIP1Q96S55 665 aa10.22□□□□□ -0.77
GINS3-204ENST00000561952 ABCF2Q9UG63 623 aa10.22□□□□□ -0.77
GINS3-204ENST00000561952 FBXO3Q9UK99 471 aa10.22□□□□□ -0.77
GINS3-204ENST00000561952 DENND2AQ9ULE3 1009 aa10.22□□□□□ -0.77
GINS3-204ENST00000561952 SUGT1Q9Y2Z0 365 aa10.22□□□□□ -0.77
GINS3-204ENST00000561952 CSADQ9Y600 493 aa10.22□□□□□ -0.77
GINS3-204ENST00000561952 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.22□□□□□ -0.77
GINS3-204ENST00000561952 FKTNO75072 461 aa10.21□□□□□ -0.77
GINS3-204ENST00000561952 MAP3K9P80192 1104 aa10.21□□□□□ -0.77
GINS3-204ENST00000561952 NFIAQ12857 509 aa10.21□□□□□ -0.77
GINS3-204ENST00000561952 GORABQ5T7V8 394 aa10.21□□□□□ -0.77
GINS3-204ENST00000561952 CDC42EP5Q6NZY7 148 aa10.21□□□□□ -0.77
GINS3-204ENST00000561952 HHIPL2Q6UWX4 724 aa10.21□□□□□ -0.77
GINS3-204ENST00000561952 DZIP1Q86YF9 867 aaKnown RBP10.21□□□□□ -0.77
GINS3-204ENST00000561952 ITPRIPQ8IWB1 547 aa10.21□□□□□ -0.77
GINS3-204ENST00000561952 XAGE2Q96GT9 111 aa10.21□□□□□ -0.77
GINS3-204ENST00000561952 CCL15-CCL14A0A0B4J2E2 113 aa10.2□□□□□ -0.78
GINS3-204ENST00000561952 ZSWIM8A7E2V4 1837 aa10.2□□□□□ -0.78
GINS3-204ENST00000561952 ECM2O94769 699 aaPredicted RBP10.2□□□□□ -0.78
GINS3-204ENST00000561952 ALDH1A1P00352 501 aa10.2□□□□□ -0.78
GINS3-204ENST00000561952 G3BP1Q13283 466 aaKnown RBP eCLIP10.2□□□□□ -0.78
GINS3-204ENST00000561952 CRHR2Q13324 411 aa10.2□□□□□ -0.78
GINS3-204ENST00000561952 OS9Q13438 667 aaPredicted RBP10.2□□□□□ -0.78
GINS3-204ENST00000561952 RASGRF1Q13972 1273 aa10.2□□□□□ -0.78
GINS3-204ENST00000561952 CCL15Q16663 113 aa10.2□□□□□ -0.78
GINS3-204ENST00000561952 PI16Q6UXB8 463 aa10.2□□□□□ -0.78
GINS3-204ENST00000561952 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.2□□□□□ -0.78
GINS3-204ENST00000561952 ZKSCAN4Q969J2 545 aaPredicted RBP10.2□□□□□ -0.78
GINS3-204ENST00000561952 SCUBE2Q9NQ36 999 aa10.2□□□□□ -0.78
GINS3-204ENST00000561952 USP40Q9NVE5 1235 aa10.2□□□□□ -0.78
GINS3-204ENST00000561952 HPS5Q9UPZ3 1129 aa10.2□□□□□ -0.78
GINS3-204ENST00000561952 AKAP2Q9Y2D5 859 aa10.2□□□□□ -0.78
GINS3-204ENST00000561952 HTTP42858 3142 aa10.2□□□□□ -0.78
GINS3-204ENST00000561952 MYO5AQ9Y4I1 1855 aaKnown RBP10.19□□□□□ -0.78
GINS3-204ENST00000561952 MLLT1Q03111 559 aaPredicted RBP10.19□□□□□ -0.78
GINS3-204ENST00000561952 PICALMQ13492 652 aa10.19□□□□□ -0.78
GINS3-204ENST00000561952 MTX1Q13505 466 aa10.19□□□□□ -0.78
GINS3-204ENST00000561952 MVPQ14764 893 aaKnown RBP10.19□□□□□ -0.78
GINS3-204ENST00000561952 OTUD7BQ6GQQ9 843 aa10.19□□□□□ -0.78
GINS3-204ENST00000561952 FAM83AQ86UY5 434 aa10.19□□□□□ -0.78
GINS3-204ENST00000561952 CD99L2Q8TCZ2 262 aa10.19□□□□□ -0.78
GINS3-204ENST00000561952 BRI3BPQ8WY22 251 aa10.19□□□□□ -0.78
GINS3-204ENST00000561952 PTPN18Q99952 460 aa10.19□□□□□ -0.78
GINS3-204ENST00000561952 TRIM17Q9Y577 477 aa10.19□□□□□ -0.78
GINS3-204ENST00000561952 SNCAIPQ9Y6H5 919 aa10.19□□□□□ -0.78
GINS3-204ENST00000561952 RPAP1Q9BWH6 1393 aaPredicted RBP10.18□□□□□ -0.78
GINS3-204ENST00000561952 BRCA2P51587 3418 aa10.18□□□□□ -0.78
GINS3-204ENST00000561952 SALL1Q9NSC2 1324 aa10.18□□□□□ -0.78
GINS3-204ENST00000561952 SEMA3EO15041 775 aa10.18□□□□□ -0.78
GINS3-204ENST00000561952 RLBP1P12271 317 aa10.18□□□□□ -0.78
GINS3-204ENST00000561952 INPP5BP32019 993 aa10.18□□□□□ -0.78
GINS3-204ENST00000561952 INHBEP58166 350 aa10.18□□□□□ -0.78
GINS3-204ENST00000561952 TAF1CQ15572 869 aaPredicted RBP10.18□□□□□ -0.78
GINS3-204ENST00000561952 DCAF15Q66K64 600 aa10.18□□□□□ -0.78
GINS3-204ENST00000561952 TBC1D9Q6ZT07 1266 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms