RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 GORABQ5T7V8 394 aa25.43■■□□□ 1.66
TPM1-232ENST00000561425 C20orf194Q5TEA3 1177 aa25.43■■□□□ 1.66
TPM1-232ENST00000561425 TNS4Q8IZW8 715 aa25.43■■□□□ 1.66
TPM1-232ENST00000561425 ZNF384Q8TF68 577 aa25.43■■□□□ 1.66
TPM1-232ENST00000561425 DBNDD2Q9BQY9 259 aa25.43■■□□□ 1.66
TPM1-232ENST00000561425 RPAP1Q9BWH6 1393 aaPredicted RBP25.43■■□□□ 1.66
TPM1-232ENST00000561425 PI16Q6UXB8 463 aa25.42■■□□□ 1.66
TPM1-232ENST00000561425 ANKRD13AQ8IZ07 590 aa25.42■■□□□ 1.66
TPM1-232ENST00000561425 EAF2Q96CJ1 260 aaPredicted RBP25.42■■□□□ 1.66
TPM1-232ENST00000561425 SLC10A4Q96EP9 437 aa25.42■■□□□ 1.66
TPM1-232ENST00000561425 CLMNQ96JQ2 1002 aa25.42■■□□□ 1.66
TPM1-232ENST00000561425 ABCF2Q9UG63 623 aa25.42■■□□□ 1.66
TPM1-232ENST00000561425 TSKSQ9UJT2 592 aa25.42■■□□□ 1.66
TPM1-232ENST00000561425 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.41■■□□□ 1.66
TPM1-232ENST00000561425 FAM151AQ8WW52 585 aa25.41■■□□□ 1.66
TPM1-232ENST00000561425 DBNLQ9UJU6 430 aaKnown RBP25.41■■□□□ 1.66
TPM1-232ENST00000561425 ZBTB48P10074 688 aaPredicted RBP25.4■■□□□ 1.66
TPM1-232ENST00000561425 MECOMQ03112 1051 aa25.4■■□□□ 1.66
TPM1-232ENST00000561425 CCDC158Q5M9N0 1113 aa25.4■■□□□ 1.66
TPM1-232ENST00000561425 ERICH6Q7L0X2 663 aa25.4■■□□□ 1.66
TPM1-232ENST00000561425 ERC1Q8IUD2 1116 aa25.4■■□□□ 1.66
TPM1-232ENST00000561425 SLF2Q8IX21 1173 aa25.4■■□□□ 1.66
TPM1-232ENST00000561425 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.4■■□□□ 1.66
TPM1-232ENST00000561425 IDI2Q9BXS1 227 aa25.4■■□□□ 1.66
TPM1-232ENST00000561425 USP40Q9NVE5 1235 aa25.4■■□□□ 1.66
TPM1-232ENST00000561425 FAM198AQ9UFP1 575 aa25.4■■□□□ 1.66
TPM1-232ENST00000561425 GPR75-ASB3A0A0A6YYF3 556 aa25.39■■□□□ 1.66
TPM1-232ENST00000561425 NFIAQ12857 509 aa25.39■■□□□ 1.66
TPM1-232ENST00000561425 HSP90AB4PQ58FF6 505 aa25.39■■□□□ 1.66
TPM1-232ENST00000561425 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.39■■□□□ 1.66
TPM1-232ENST00000561425 TBC1D9Q6ZT07 1266 aa25.39■■□□□ 1.66
TPM1-232ENST00000561425 NSUN4Q96CB9 384 aaKnown RBP25.39■■□□□ 1.66
TPM1-232ENST00000561425 WNK4Q96J92 1243 aa25.39■■□□□ 1.66
TPM1-232ENST00000561425 EXOC6BQ9Y2D4 811 aa25.39■■□□□ 1.66
TPM1-232ENST00000561425 IGSF3O75054 1194 aa25.38■■□□□ 1.65
TPM1-232ENST00000561425 TRPA1O75762 1119 aa25.38■■□□□ 1.65
TPM1-232ENST00000561425 MAP3K9P80192 1104 aa25.38■■□□□ 1.65
TPM1-232ENST00000561425 DZIP1Q86YF9 867 aaKnown RBP25.38■■□□□ 1.65
TPM1-232ENST00000561425 HOOK2Q96ED9 719 aa25.38■■□□□ 1.65
TPM1-232ENST00000561425 RFX7Q2KHR2 1363 aa25.37■■□□□ 1.65
TPM1-232ENST00000561425 INHBEP58166 350 aa25.37■■□□□ 1.65
TPM1-232ENST00000561425 TLR7Q9NYK1 1049 aaKnown RBP25.37■■□□□ 1.65
TPM1-232ENST00000561425 MROH7-TTC4A0A0A0MT08 1334 aa25.37■■□□□ 1.65
TPM1-232ENST00000561425 HMMRO75330 724 aa25.36■■□□□ 1.65
TPM1-232ENST00000561425 GJA5P36382 358 aa25.36■■□□□ 1.65
TPM1-232ENST00000561425 TTC39AQ5SRH9 613 aa25.36■■□□□ 1.65
TPM1-232ENST00000561425 RHPN1Q8TCX5 695 aa25.36■■□□□ 1.65
TPM1-232ENST00000561425 CFHR5Q9BXR6 569 aa25.36■■□□□ 1.65
TPM1-232ENST00000561425 CCDC8Q9H0W5 538 aaPredicted RBP25.36■■□□□ 1.65
TPM1-232ENST00000561425 MANSC4A6NHS7 340 aaPredicted RBP25.35■■□□□ 1.65
TPM1-232ENST00000561425 ENTPD3O75355 529 aa25.35■■□□□ 1.65
TPM1-232ENST00000561425 RHBDL3P58872 404 aa25.35■■□□□ 1.65
TPM1-232ENST00000561425 SREBF2Q12772 1141 aa25.35■■□□□ 1.65
TPM1-232ENST00000561425 TESPA1A2RU30 521 aaPredicted RBP25.34■■□□□ 1.65
TPM1-232ENST00000561425 NPM3O75607 178 aaKnown RBP25.34■■□□□ 1.65
TPM1-232ENST00000561425 WDHD1O75717 1129 aaPredicted RBP25.34■■□□□ 1.65
TPM1-232ENST00000561425 MAP4K4O95819 1239 aaPredicted RBP25.34■■□□□ 1.65
TPM1-232ENST00000561425 CYP2E1P05181 493 aaPredicted RBP25.34■■□□□ 1.65
TPM1-232ENST00000561425 LDHCP07864 332 aa25.34■■□□□ 1.65
TPM1-232ENST00000561425 MKRN3Q13064 507 aaKnown RBP25.34■■□□□ 1.65
TPM1-232ENST00000561425 ZFPM1Q8IX07 1006 aa25.34■■□□□ 1.65
TPM1-232ENST00000561425 ZNF112Q9UJU3 913 aa25.34■■□□□ 1.65
TPM1-232ENST00000561425 BTDP43251 543 aa25.33■■□□□ 1.65
TPM1-232ENST00000561425 GSTO1P78417 241 aa25.33■■□□□ 1.65
TPM1-232ENST00000561425 TCP10Q12799 353 aa25.33■■□□□ 1.65
TPM1-232ENST00000561425 VGLL4Q14135 290 aa25.33■■□□□ 1.65
TPM1-232ENST00000561425 SNRKQ9NRH2 765 aa25.33■■□□□ 1.65
TPM1-232ENST00000561425 AKAP11Q9UKA4 1901 aa25.32■■□□□ 1.64
TPM1-232ENST00000561425 MYH2Q9UKX2 1941 aa25.32■■□□□ 1.64
TPM1-232ENST00000561425 RAB11FIP3O75154 756 aa25.32■■□□□ 1.64
TPM1-232ENST00000561425 MAP3K10Q02779 954 aa25.32■■□□□ 1.64
TPM1-232ENST00000561425 NOM1Q5C9Z4 860 aaKnown RBP25.32■■□□□ 1.64
TPM1-232ENST00000561425 DCAF15Q66K64 600 aa25.32■■□□□ 1.64
TPM1-232ENST00000561425 KIF1BPQ96EK5 621 aa25.32■■□□□ 1.64
TPM1-232ENST00000561425 LRP2BPQ9P2M1 347 aa25.32■■□□□ 1.64
TPM1-232ENST00000561425 ATRNL1Q5VV63 1379 aa25.31■■□□□ 1.64
TPM1-232ENST00000561425 LAMB1P07942 1786 aa25.31■■□□□ 1.64
TPM1-232ENST00000561425 ZAP70P43403 619 aa25.31■■□□□ 1.64
TPM1-232ENST00000561425 RGS3P49796 1198 aa25.31■■□□□ 1.64
TPM1-232ENST00000561425 SH3BP5LQ7L8J4 393 aa25.31■■□□□ 1.64
TPM1-232ENST00000561425 MS4A4AQ96JQ5 239 aa25.31■■□□□ 1.64
TPM1-232ENST00000561425 ZNF341Q9BYN7 854 aa25.31■■□□□ 1.64
TPM1-232ENST00000561425 ELP3Q9H9T3 547 aa25.31■■□□□ 1.64
TPM1-232ENST00000561425 RAI14Q9P0K7 980 aa25.31■■□□□ 1.64
TPM1-232ENST00000561425 MIGA2Q7L4E1 593 aa25.3■■□□□ 1.64
TPM1-232ENST00000561425 AACSQ86V21 672 aa25.3■■□□□ 1.64
TPM1-232ENST00000561425 IFNL1Q8IU54 200 aa25.3■■□□□ 1.64
TPM1-232ENST00000561425 OPTNQ96CV9 577 aa25.3■■□□□ 1.64
TPM1-232ENST00000561425 DDX4Q9NQI0 724 aaKnown RBP25.3■■□□□ 1.64
TPM1-232ENST00000561425 SNCAIPQ9Y6H5 919 aa25.3■■□□□ 1.64
TPM1-232ENST00000561425 SPDYE5A6NIY4 337 aa25.29■■□□□ 1.64
TPM1-232ENST00000561425 PPP4CP60510 307 aa25.29■■□□□ 1.64
TPM1-232ENST00000561425 WRNIP1Q96S55 665 aa25.29■■□□□ 1.64
TPM1-232ENST00000561425 IL1RAPL2Q9NP60 686 aa25.29■■□□□ 1.64
TPM1-232ENST00000561425 PIH1D3Q9NQM4 214 aaKnown RBP25.29■■□□□ 1.64
TPM1-232ENST00000561425 CSADQ9Y600 493 aa25.29■■□□□ 1.64
TPM1-232ENST00000561425 OTOFQ9HC10 1997 aa25.29■■□□□ 1.64
TPM1-232ENST00000561425 ALDH1A1P00352 501 aa25.28■■□□□ 1.64
TPM1-232ENST00000561425 CNKSR2Q8WXI2 1034 aa25.28■■□□□ 1.64
TPM1-232ENST00000561425 IGF2BP3O00425 579 aaKnown RBP eCLIP25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms