RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 NEXNQ0ZGT2 675 aa12.26□□□□□ -0.45
HERC1-210ENST00000560897 MFSD14BQ5SR56 506 aa12.26□□□□□ -0.45
HERC1-210ENST00000560897 DUSP27Q5VZP5 1158 aa12.26□□□□□ -0.45
HERC1-210ENST00000560897 CDX2Q99626 313 aaPredicted RBP12.26□□□□□ -0.45
HERC1-210ENST00000560897 LBHD1Q9BQE6 289 aaPredicted RBP12.26□□□□□ -0.45
HERC1-210ENST00000560897 ZNF341Q9BYN7 854 aa12.26□□□□□ -0.45
HERC1-210ENST00000560897 PHAXQ9H814 394 aaKnown RBP12.26□□□□□ -0.45
HERC1-210ENST00000560897 RAPGEFL1Q9UHV5 662 aa12.26□□□□□ -0.45
HERC1-210ENST00000560897 CYP2C8P10632 490 aa12.25□□□□□ -0.45
HERC1-210ENST00000560897 CRKP46108 304 aa12.25□□□□□ -0.45
HERC1-210ENST00000560897 TJAP1Q5JTD0 557 aa12.25□□□□□ -0.45
HERC1-210ENST00000560897 C15orf52Q6ZUT6 534 aaKnown RBP12.25□□□□□ -0.45
HERC1-210ENST00000560897 PCGF6Q9BYE7 350 aa12.25□□□□□ -0.45
HERC1-210ENST00000560897 TAF5LO75529 589 aa12.24□□□□□ -0.45
HERC1-210ENST00000560897 HMGCRP04035 888 aa12.24□□□□□ -0.45
HERC1-210ENST00000560897 FOSL2P15408 326 aa12.24□□□□□ -0.45
HERC1-210ENST00000560897 TMPOP42166 694 aaKnown RBP12.24□□□□□ -0.45
HERC1-210ENST00000560897 NEUROD2Q15784 382 aa12.24□□□□□ -0.45
HERC1-210ENST00000560897 EYSQ5T1H1 3165 aa12.24□□□□□ -0.45
HERC1-210ENST00000560897 SMCR8Q8TEV9 937 aaPredicted RBP12.24□□□□□ -0.45
HERC1-210ENST00000560897 HMX1Q9NP08 348 aaPredicted RBP12.24□□□□□ -0.45
HERC1-210ENST00000560897 KCNH4Q9UQ05 1017 aa12.24□□□□□ -0.45
HERC1-210ENST00000560897 RNF39Q9H2S5 420 aa12.23□□□□□ -0.45
HERC1-210ENST00000560897 MAP3K2Q9Y2U5 619 aa12.23□□□□□ -0.45
HERC1-210ENST00000560897 COL2A1P02458 1487 aaPredicted RBP12.22□□□□□ -0.45
HERC1-210ENST00000560897 AK9Q5TCS8 1911 aa12.22□□□□□ -0.45
HERC1-210ENST00000560897 ANKRD18BA2A2Z9 1011 aa12.22□□□□□ -0.45
HERC1-210ENST00000560897 SNAP23O00161 211 aa12.22□□□□□ -0.45
HERC1-210ENST00000560897 CACNB3P54284 484 aa12.22□□□□□ -0.45
HERC1-210ENST00000560897 MIGA2Q7L4E1 593 aa12.22□□□□□ -0.45
HERC1-210ENST00000560897 FASTKD5Q7L8L6 764 aaKnown RBP12.22□□□□□ -0.45
HERC1-210ENST00000560897 UBE3BQ7Z3V4 1068 aa12.22□□□□□ -0.45
HERC1-210ENST00000560897 FAM83AQ86UY5 434 aa12.22□□□□□ -0.45
HERC1-210ENST00000560897 MYLIPQ8WY64 445 aa12.22□□□□□ -0.45
HERC1-210ENST00000560897 PRUNE2Q8WUY3 3088 aa12.21□□□□□ -0.45
HERC1-210ENST00000560897 INPP5BP32019 993 aa12.21□□□□□ -0.45
HERC1-210ENST00000560897 CHMP4AQ9BY43 222 aa12.21□□□□□ -0.45
HERC1-210ENST00000560897 SEMA6BQ9H3T3 888 aa12.21□□□□□ -0.45
HERC1-210ENST00000560897 PRKAG2Q9UGJ0 569 aa12.21□□□□□ -0.45
HERC1-210ENST00000560897 DOCK3Q8IZD9 2030 aa12.21□□□□□ -0.46
HERC1-210ENST00000560897 RPAP1Q9BWH6 1393 aaPredicted RBP12.2□□□□□ -0.46
HERC1-210ENST00000560897 MUC3AQ02505 3323 aa12.2□□□□□ -0.46
HERC1-210ENST00000560897 CXCL11O14625 94 aa12.2□□□□□ -0.46
HERC1-210ENST00000560897 GADL1Q6ZQY3 521 aa12.2□□□□□ -0.46
HERC1-210ENST00000560897 TEKT1Q969V4 418 aa12.2□□□□□ -0.46
HERC1-210ENST00000560897 RTN4Q9NQC3 1192 aaKnown RBP12.2□□□□□ -0.46
HERC1-210ENST00000560897 OGDHLQ9ULD0 1010 aa12.2□□□□□ -0.46
HERC1-210ENST00000560897 PLIN1O60240 522 aa12.19□□□□□ -0.46
HERC1-210ENST00000560897 IGKV5-2P06315 115 aa12.19□□□□□ -0.46
HERC1-210ENST00000560897 CACNB1Q02641 598 aaPredicted RBP12.19□□□□□ -0.46
HERC1-210ENST00000560897 MAP3K12Q12852 859 aa12.19□□□□□ -0.46
HERC1-210ENST00000560897 GPAT2Q6NUI2 795 aa12.19□□□□□ -0.46
HERC1-210ENST00000560897 PLA2G12BQ9BX93 195 aa12.19□□□□□ -0.46
HERC1-210ENST00000560897 CHMP3Q9Y3E7 222 aa12.19□□□□□ -0.46
HERC1-210ENST00000560897 A0A1B0GUL6 1792 aa12.19□□□□□ -0.46
HERC1-210ENST00000560897 PFASO15067 1338 aa12.18□□□□□ -0.46
HERC1-210ENST00000560897 HDLBPQ00341 1268 aaKnown RBP12.18□□□□□ -0.46
HERC1-210ENST00000560897 IFIT5Q13325 482 aaKnown RBP12.18□□□□□ -0.46
HERC1-210ENST00000560897 MOGSQ13724 837 aa12.18□□□□□ -0.46
HERC1-210ENST00000560897 CWF19L2Q2TBE0 894 aaKnown RBP12.18□□□□□ -0.46
HERC1-210ENST00000560897 TAF7LQ5H9L4 462 aa12.18□□□□□ -0.46
HERC1-210ENST00000560897 FKBP1CQ5VVH2 108 aa12.18□□□□□ -0.46
HERC1-210ENST00000560897 KSR2Q6VAB6 950 aa12.18□□□□□ -0.46
HERC1-210ENST00000560897 VPS37DQ86XT2 251 aa12.18□□□□□ -0.46
HERC1-210ENST00000560897 PICK1Q9NRD5 415 aa12.18□□□□□ -0.46
HERC1-210ENST00000560897 SLC45A1Q9Y2W3 748 aa12.18□□□□□ -0.46
HERC1-210ENST00000560897 PI4KAP2A4QPH2 592 aa12.17□□□□□ -0.46
HERC1-210ENST00000560897 NEURL1BA8MQ27 555 aa12.17□□□□□ -0.46
HERC1-210ENST00000560897 ELL2O00472 640 aaPredicted RBP12.17□□□□□ -0.46
HERC1-210ENST00000560897 FRAT2O75474 233 aaPredicted RBP12.17□□□□□ -0.46
HERC1-210ENST00000560897 HIBADHP31937 336 aaKnown RBP12.17□□□□□ -0.46
HERC1-210ENST00000560897 NOL9Q5SY16 702 aaKnown RBP12.17□□□□□ -0.46
HERC1-210ENST00000560897 CCDC30Q5VVM6 783 aa12.17□□□□□ -0.46
HERC1-210ENST00000560897 ANKRD13CQ8N6S4 541 aa12.17□□□□□ -0.46
HERC1-210ENST00000560897 PI4KAP1Q8N8J0 262 aa12.17□□□□□ -0.46
HERC1-210ENST00000560897 IL27Q8NEV9 243 aa12.17□□□□□ -0.46
HERC1-210ENST00000560897 TDRD7Q8NHU6 1098 aaKnown RBP12.17□□□□□ -0.46
HERC1-210ENST00000560897 TBC1D22AQ8WUA7 517 aa12.17□□□□□ -0.46
HERC1-210ENST00000560897 PNMA3Q9UL41 463 aa12.17□□□□□ -0.46
HERC1-210ENST00000560897 MAST3O60307 1309 aa12.16□□□□□ -0.46
HERC1-210ENST00000560897 LAMA2P24043 3122 aaKnown RBP12.16□□□□□ -0.46
HERC1-210ENST00000560897 A0A0G2JLL6 359 aaPredicted RBP12.16□□□□□ -0.46
HERC1-210ENST00000560897 H7C1W4 665 aa12.16□□□□□ -0.46
HERC1-210ENST00000560897 CHAF1AQ13111 956 aaPredicted RBP12.16□□□□□ -0.46
HERC1-210ENST00000560897 FAM110CQ1W6H9 321 aa12.16□□□□□ -0.46
HERC1-210ENST00000560897 LRRC26Q2I0M4 334 aa12.16□□□□□ -0.46
HERC1-210ENST00000560897 PRRT2Q7Z6L0 340 aaPredicted RBP12.16□□□□□ -0.46
HERC1-210ENST00000560897 MYH16Q9H6N6 1097 aa12.16□□□□□ -0.46
HERC1-210ENST00000560897 CNNM1Q9NRU3 951 aa12.16□□□□□ -0.46
HERC1-210ENST00000560897 MBIPQ9NS73 344 aa12.16□□□□□ -0.46
HERC1-210ENST00000560897 HCN4Q9Y3Q4 1203 aa12.16□□□□□ -0.46
HERC1-210ENST00000560897 CSF1RP07333 972 aa12.15□□□□□ -0.46
HERC1-210ENST00000560897 PRKAR2AP13861 404 aaKnown RBP12.15□□□□□ -0.46
HERC1-210ENST00000560897 GYG1P46976 350 aa12.15□□□□□ -0.46
HERC1-210ENST00000560897 ZDHHC15Q96MV8 337 aa12.15□□□□□ -0.46
HERC1-210ENST00000560897 ZNF112Q9UJU3 913 aa12.15□□□□□ -0.46
HERC1-210ENST00000560897 ZHX2Q9Y6X8 837 aa12.15□□□□□ -0.46
HERC1-210ENST00000560897 CDH23Q9H251 3354 aa12.15□□□□□ -0.46
HERC1-210ENST00000560897 COL6A1P12109 1028 aa12.14□□□□□ -0.47
HERC1-210ENST00000560897 SMAD3P84022 425 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms