RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 PAXIP1Q6ZW49 1069 aaPredicted RBP18.37■□□□□ 0.53
PBX1-219ENST00000560641 RASGRP2Q7LDG7 609 aa18.37■□□□□ 0.53
PBX1-219ENST00000560641 ENOX1Q8TC92 643 aaKnown RBP18.37■□□□□ 0.53
PBX1-219ENST00000560641 ADGRG1Q9Y653 693 aa18.37■□□□□ 0.53
PBX1-219ENST00000560641 AMPHP49418 695 aa18.37■□□□□ 0.53
PBX1-219ENST00000560641 PIP4K2BP78356 416 aa18.37■□□□□ 0.53
PBX1-219ENST00000560641 SEC62Q99442 399 aaKnown RBP18.37■□□□□ 0.53
PBX1-219ENST00000560641 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.37■□□□□ 0.53
PBX1-219ENST00000560641 FANCLQ9NW38 375 aa18.37■□□□□ 0.53
PBX1-219ENST00000560641 CAMTA1Q9Y6Y1 1673 aa18.37■□□□□ 0.53
PBX1-219ENST00000560641 RGPD8O14715 1765 aaPredicted RBP18.37■□□□□ 0.53
PBX1-219ENST00000560641 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.36■□□□□ 0.53
PBX1-219ENST00000560641 BIN1O00499 593 aa18.36■□□□□ 0.53
PBX1-219ENST00000560641 SYKP43405 635 aa18.36■□□□□ 0.53
PBX1-219ENST00000560641 N4BP1O75113 896 aaKnown RBP18.36■□□□□ 0.53
PBX1-219ENST00000560641 WDHD1O75717 1129 aaPredicted RBP18.36■□□□□ 0.53
PBX1-219ENST00000560641 MDM2Q00987 491 aaPredicted RBP18.36■□□□□ 0.53
PBX1-219ENST00000560641 HSP90B2PQ58FF3 399 aa18.36■□□□□ 0.53
PBX1-219ENST00000560641 KIF23Q02241 960 aaPredicted RBP18.36■□□□□ 0.53
PBX1-219ENST00000560641 NR1I3Q14994 352 aa18.36■□□□□ 0.53
PBX1-219ENST00000560641 FBXW7Q969H0 707 aa18.36■□□□□ 0.53
PBX1-219ENST00000560641 FMNL2Q96PY5 1086 aa18.36■□□□□ 0.53
PBX1-219ENST00000560641 A1CFQ9NQ94 594 aaKnown RBP18.36■□□□□ 0.53
PBX1-219ENST00000560641 ZC3H4Q9UPT8 1303 aaKnown RBP18.36■□□□□ 0.53
PBX1-219ENST00000560641 NPM1P06748 294 aaKnown RBP eCLIP18.35■□□□□ 0.53
PBX1-219ENST00000560641 MCM6Q14566 821 aa18.35■□□□□ 0.53
PBX1-219ENST00000560641 KBTBD3Q8NAB2 608 aa18.35■□□□□ 0.53
PBX1-219ENST00000560641 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.35■□□□□ 0.53
PBX1-219ENST00000560641 DBNLQ9UJU6 430 aaKnown RBP18.35■□□□□ 0.53
PBX1-219ENST00000560641 LOC102724159A0A0B4J2E5 919 aa18.35■□□□□ 0.53
PBX1-219ENST00000560641 A0A1B0GTH6 734 aa18.35■□□□□ 0.53
PBX1-219ENST00000560641 E7EWF7 191 aa18.35■□□□□ 0.53
PBX1-219ENST00000560641 MCM3P25205 808 aa18.35■□□□□ 0.53
PBX1-219ENST00000560641 HDGFP51858 240 aaKnown RBP18.35■□□□□ 0.53
PBX1-219ENST00000560641 PTPAQ15257 358 aa18.35■□□□□ 0.53
PBX1-219ENST00000560641 PWP2Q15269 919 aaKnown RBP18.35■□□□□ 0.53
PBX1-219ENST00000560641 JMYQ8N9B5 988 aa18.35■□□□□ 0.53
PBX1-219ENST00000560641 TRIML1Q8N9V2 468 aa18.35■□□□□ 0.53
PBX1-219ENST00000560641 C8orf76Q96K31 380 aa18.35■□□□□ 0.53
PBX1-219ENST00000560641 METTL16Q86W50 562 aaKnown RBP18.34■□□□□ 0.53
PBX1-219ENST00000560641 KIF5CO60282 957 aa18.34■□□□□ 0.53
PBX1-219ENST00000560641 SYF2O95926 243 aaKnown RBP18.34■□□□□ 0.53
PBX1-219ENST00000560641 PBX1P40424 430 aa18.34■□□□□ 0.53
PBX1-219ENST00000560641 VSNL1P62760 191 aa18.34■□□□□ 0.53
PBX1-219ENST00000560641 TNNI3KQ59H18 835 aa18.34■□□□□ 0.53
PBX1-219ENST00000560641 CCDC51Q96ER9 411 aa18.34■□□□□ 0.53
PBX1-219ENST00000560641 FPGT-TNNI3KV9GXZ4 949 aa18.34■□□□□ 0.53
PBX1-219ENST00000560641 WDR17Q8IZU2 1322 aa18.34■□□□□ 0.53
PBX1-219ENST00000560641 EIF2S2P20042 333 aaKnown RBP18.34■□□□□ 0.53
PBX1-219ENST00000560641 SHC4Q6S5L8 630 aa18.34■□□□□ 0.53
PBX1-219ENST00000560641 MLKLQ8NB16 471 aa18.34■□□□□ 0.53
PBX1-219ENST00000560641 DACH1Q9UI36 760 aa18.34■□□□□ 0.53
PBX1-219ENST00000560641 KIF1CO43896 1103 aaKnown RBP18.33■□□□□ 0.53
PBX1-219ENST00000560641 SARSP49591 514 aaKnown RBP18.33■□□□□ 0.53
PBX1-219ENST00000560641 AFAP1L1Q8TED9 768 aa18.33■□□□□ 0.53
PBX1-219ENST00000560641 LRRC2Q9BYS8 371 aa18.33■□□□□ 0.53
PBX1-219ENST00000560641 FAM204AQ9H8W3 233 aa18.33■□□□□ 0.53
PBX1-219ENST00000560641 RAI14Q9P0K7 980 aa18.33■□□□□ 0.53
PBX1-219ENST00000560641 RFX5P48382 616 aaPredicted RBP18.33■□□□□ 0.52
PBX1-219ENST00000560641 NCOA5Q9HCD5 579 aaKnown RBP18.33■□□□□ 0.52
PBX1-219ENST00000560641 TTF2Q9UNY4 1162 aaKnown RBP18.33■□□□□ 0.52
PBX1-219ENST00000560641 AKR1B15C9JRZ8 316 aaPredicted RBP18.32■□□□□ 0.52
PBX1-219ENST00000560641 BMP6P22004 513 aa18.32■□□□□ 0.52
PBX1-219ENST00000560641 AMPD2Q01433 879 aa18.32■□□□□ 0.52
PBX1-219ENST00000560641 GOLGA8FQ08AF8 430 aa18.32■□□□□ 0.52
PBX1-219ENST00000560641 GOLGA8DPQ0D2H9 430 aa18.32■□□□□ 0.52
PBX1-219ENST00000560641 SYNE3Q6ZMZ3 975 aa18.32■□□□□ 0.52
PBX1-219ENST00000560641 MAP3K14Q99558 947 aa18.32■□□□□ 0.52
PBX1-219ENST00000560641 MYO5AQ9Y4I1 1855 aaKnown RBP18.32■□□□□ 0.52
PBX1-219ENST00000560641 TARSL2A2RTX5 802 aaKnown RBP18.32■□□□□ 0.52
PBX1-219ENST00000560641 CTAGE9A4FU28 777 aa18.32■□□□□ 0.52
PBX1-219ENST00000560641 LRRIQ3A6PVS8 624 aaPredicted RBP18.32■□□□□ 0.52
PBX1-219ENST00000560641 CLGNO14967 610 aa18.32■□□□□ 0.52
PBX1-219ENST00000560641 CCT2P78371 535 aaKnown RBP18.32■□□□□ 0.52
PBX1-219ENST00000560641 FAM177A1Q8N128 213 aaPredicted RBP18.32■□□□□ 0.52
PBX1-219ENST00000560641 ITIH6Q6UXX5 1313 aa18.32■□□□□ 0.52
PBX1-219ENST00000560641 BCL9LQ86UU0 1499 aa18.32■□□□□ 0.52
PBX1-219ENST00000560641 CCDC196A0A1B0GTZ2 297 aa18.32■□□□□ 0.52
PBX1-219ENST00000560641 ZMYM1Q5SVZ6 1142 aa18.32■□□□□ 0.52
PBX1-219ENST00000560641 NUTM2AQ8IVF1 878 aaPredicted RBP18.32■□□□□ 0.52
PBX1-219ENST00000560641 KIF28PB7ZC32 967 aa18.31■□□□□ 0.52
PBX1-219ENST00000560641 CCDC129Q6ZRS4 1044 aa18.31■□□□□ 0.52
PBX1-219ENST00000560641 DRC1Q96MC2 740 aa18.31■□□□□ 0.52
PBX1-219ENST00000560641 CDHR2Q9BYE9 1310 aa18.31■□□□□ 0.52
PBX1-219ENST00000560641 APTXQ7Z2E3 356 aaKnown RBP18.31■□□□□ 0.52
PBX1-219ENST00000560641 FOXP4Q8IVH2 680 aaPredicted RBP18.31■□□□□ 0.52
PBX1-219ENST00000560641 ZBTB9Q96C00 473 aa18.31■□□□□ 0.52
PBX1-219ENST00000560641 DONSONQ9NYP3 566 aa18.31■□□□□ 0.52
PBX1-219ENST00000560641 AFDNP55196 1824 aaKnown RBP18.31■□□□□ 0.52
PBX1-219ENST00000560641 CTAGE15A4D2H0 777 aa18.3■□□□□ 0.52
PBX1-219ENST00000560641 RNF40O75150 1001 aa18.3■□□□□ 0.52
PBX1-219ENST00000560641 CTAGE8P0CG41 777 aa18.3■□□□□ 0.52
PBX1-219ENST00000560641 GUCY1B3Q02153 619 aa18.3■□□□□ 0.52
PBX1-219ENST00000560641 RABL6Q3YEC7 729 aaPredicted RBP18.3■□□□□ 0.52
PBX1-219ENST00000560641 CTAGE6Q86UF2 777 aa18.3■□□□□ 0.52
PBX1-219ENST00000560641 CTAGE4Q8IX94 777 aa18.3■□□□□ 0.52
PBX1-219ENST00000560641 RNF216Q9NWF9 866 aaPredicted RBP18.3■□□□□ 0.52
PBX1-219ENST00000560641 HPS5Q9UPZ3 1129 aa18.3■□□□□ 0.52
PBX1-219ENST00000560641 SEMA3EO15041 775 aa18.3■□□□□ 0.52
PBX1-219ENST00000560641 ERCC5P28715 1186 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms