RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 PHKA1P46020 1223 aa11.37□□□□□ -0.59
RTF1-206ENST00000560447 NT5C2P49902 561 aa11.37□□□□□ -0.59
RTF1-206ENST00000560447 RCAN1P53805 252 aa11.37□□□□□ -0.59
RTF1-206ENST00000560447 UBE4AQ14139 1066 aa11.37□□□□□ -0.59
RTF1-206ENST00000560447 FOXD4L6Q3SYB3 417 aaPredicted RBP11.37□□□□□ -0.59
RTF1-206ENST00000560447 CPLX2Q6PUV4 134 aaKnown RBP11.37□□□□□ -0.59
RTF1-206ENST00000560447 FOXD4L3Q6VB84 417 aaPredicted RBP11.37□□□□□ -0.59
RTF1-206ENST00000560447 BRAPQ7Z569 592 aa11.37□□□□□ -0.59
RTF1-206ENST00000560447 CCDC85AQ96PX6 553 aaPredicted RBP11.37□□□□□ -0.59
RTF1-206ENST00000560447 STRBPQ96SI9 672 aaKnown RBP11.37□□□□□ -0.59
RTF1-206ENST00000560447 NYXQ9GZU5 481 aa11.37□□□□□ -0.59
RTF1-206ENST00000560447 RTN4Q9NQC3 1192 aaKnown RBP11.37□□□□□ -0.59
RTF1-206ENST00000560447 PIH1D3Q9NQM4 214 aaKnown RBP11.37□□□□□ -0.59
RTF1-206ENST00000560447 NIP7Q9Y221 180 aaKnown RBP eCLIP11.37□□□□□ -0.59
RTF1-206ENST00000560447 ZNF804BA4D1E1 1349 aa11.36□□□□□ -0.59
RTF1-206ENST00000560447 ZNF532Q9HCE3 1301 aa11.36□□□□□ -0.59
RTF1-206ENST00000560447 SEMA3EO15041 775 aa11.36□□□□□ -0.59
RTF1-206ENST00000560447 ZNF500O60304 480 aaPredicted RBP11.36□□□□□ -0.59
RTF1-206ENST00000560447 TPM3P06753 285 aa11.36□□□□□ -0.59
RTF1-206ENST00000560447 LIFRP42702 1097 aa11.36□□□□□ -0.59
RTF1-206ENST00000560447 FERMT3Q86UX7 667 aa11.36□□□□□ -0.59
RTF1-206ENST00000560447 SGMS1Q86VZ5 419 aa11.36□□□□□ -0.59
RTF1-206ENST00000560447 FBXO22Q8NEZ5 403 aa11.36□□□□□ -0.59
RTF1-206ENST00000560447 AIDAQ96BJ3 306 aa11.36□□□□□ -0.59
RTF1-206ENST00000560447 NACAP1Q9BZK3 213 aa11.36□□□□□ -0.59
RTF1-206ENST00000560447 CLSTN2Q9H4D0 955 aa11.36□□□□□ -0.59
RTF1-206ENST00000560447 GNL3LQ9NVN8 582 aaKnown RBP11.36□□□□□ -0.59
RTF1-206ENST00000560447 ANGEL1Q9UNK9 670 aaKnown RBP11.36□□□□□ -0.59
RTF1-206ENST00000560447 ECM29Q5VYK3 1845 aa11.35□□□□□ -0.59
RTF1-206ENST00000560447 G3V3G9 751 aa11.35□□□□□ -0.59
RTF1-206ENST00000560447 IDH1O75874 414 aaKnown RBP11.35□□□□□ -0.59
RTF1-206ENST00000560447 TTLL5Q6EMB2 1281 aa11.35□□□□□ -0.59
RTF1-206ENST00000560447 MICALL2Q8IY33 904 aa11.35□□□□□ -0.59
RTF1-206ENST00000560447 LRRC2Q9BYS8 371 aa11.35□□□□□ -0.59
RTF1-206ENST00000560447 KRT23Q9C075 422 aa11.35□□□□□ -0.59
RTF1-206ENST00000560447 ZKSCAN5Q9Y2L8 839 aa11.35□□□□□ -0.59
RTF1-206ENST00000560447 SBF2Q86WG5 1849 aa11.35□□□□□ -0.59
RTF1-206ENST00000560447 SPATA31A6Q5VVP1 1343 aa11.35□□□□□ -0.59
RTF1-206ENST00000560447 STK36Q9NRP7 1315 aa11.35□□□□□ -0.59
RTF1-206ENST00000560447 CCDC88AQ3V6T2 1871 aa11.34□□□□□ -0.59
RTF1-206ENST00000560447 DLEC1Q9Y238 1755 aa11.34□□□□□ -0.59
RTF1-206ENST00000560447 DUOX1Q9NRD9 1551 aa11.34□□□□□ -0.59
RTF1-206ENST00000560447 KLF18A0A0U1RQI7 1052 aa11.34□□□□□ -0.59
RTF1-206ENST00000560447 GOLGA8BA8MQT2 603 aa11.34□□□□□ -0.59
RTF1-206ENST00000560447 SH2B2O14492 632 aaPredicted RBP11.34□□□□□ -0.59
RTF1-206ENST00000560447 CPLX1O14810 134 aa11.34□□□□□ -0.59
RTF1-206ENST00000560447 YEATS4O95619 227 aa11.34□□□□□ -0.59
RTF1-206ENST00000560447 PCP11498 1178 aaKnown RBP11.34□□□□□ -0.59
RTF1-206ENST00000560447 HCLS1P14317 486 aaPredicted RBP11.34□□□□□ -0.59
RTF1-206ENST00000560447 HMGB2P26583 209 aaKnown RBP11.34□□□□□ -0.59
RTF1-206ENST00000560447 ADD1P35611 737 aaKnown RBP11.34□□□□□ -0.59
RTF1-206ENST00000560447 ANTXR2P58335 489 aa11.34□□□□□ -0.59
RTF1-206ENST00000560447 RASGRF1Q13972 1273 aa11.34□□□□□ -0.59
RTF1-206ENST00000560447 PPP2R5BQ15173 497 aa11.34□□□□□ -0.59
RTF1-206ENST00000560447 SLFNL1Q499Z3 407 aa11.34□□□□□ -0.59
RTF1-206ENST00000560447 ANKRD18AQ8IVF6 992 aa11.34□□□□□ -0.59
RTF1-206ENST00000560447 TMTC2Q8N394 836 aa11.34□□□□□ -0.59
RTF1-206ENST00000560447 FNBP4Q8N3X1 1017 aaPredicted RBP11.34□□□□□ -0.59
RTF1-206ENST00000560447 FAM200AQ8TCP9 573 aa11.34□□□□□ -0.59
RTF1-206ENST00000560447 DDX11Q96FC9 970 aa11.34□□□□□ -0.59
RTF1-206ENST00000560447 ACSBG1Q96GR2 724 aa11.34□□□□□ -0.59
RTF1-206ENST00000560447 RNF41Q9H4P4 317 aaPredicted RBP11.34□□□□□ -0.59
RTF1-206ENST00000560447 BSDC1Q9NW68 430 aaPredicted RBP11.34□□□□□ -0.59
RTF1-206ENST00000560447 RTEL1Q9NZ71 1219 aa11.34□□□□□ -0.59
RTF1-206ENST00000560447 USP25Q9UHP3 1055 aa11.34□□□□□ -0.59
RTF1-206ENST00000560447 STK24Q9Y6E0 443 aa11.34□□□□□ -0.59
RTF1-206ENST00000560447 A0A1W2PQ27 194 aa11.33□□□□□ -0.6
RTF1-206ENST00000560447 A0A1W2PQ64 194 aa11.33□□□□□ -0.6
RTF1-206ENST00000560447 A0A1W2PQD8 194 aa11.33□□□□□ -0.6
RTF1-206ENST00000560447 KDM4AO75164 1064 aa11.33□□□□□ -0.6
RTF1-206ENST00000560447 RPS6KA4O75676 772 aa11.33□□□□□ -0.6
RTF1-206ENST00000560447 TERF1P54274 439 aa11.33□□□□□ -0.6
RTF1-206ENST00000560447 CHRNDQ07001 517 aa11.33□□□□□ -0.6
RTF1-206ENST00000560447 PI16Q6UXB8 463 aa11.33□□□□□ -0.6
RTF1-206ENST00000560447 IFNL3Q8IZI9 196 aa11.33□□□□□ -0.6
RTF1-206ENST00000560447 FBXO18Q8NFZ0 1043 aa11.33□□□□□ -0.6
RTF1-206ENST00000560447 KCNG4Q8TDN1 519 aa11.33□□□□□ -0.6
RTF1-206ENST00000560447 STAG1Q8WVM7 1258 aa11.33□□□□□ -0.6
RTF1-206ENST00000560447 C8orf76Q96K31 380 aa11.33□□□□□ -0.6
RTF1-206ENST00000560447 NAPBQ9H115 298 aa11.33□□□□□ -0.6
RTF1-206ENST00000560447 TNMDQ9H2S6 317 aa11.33□□□□□ -0.6
RTF1-206ENST00000560447 NARFQ9UHQ1 456 aa11.33□□□□□ -0.6
RTF1-206ENST00000560447 WWC3Q9ULE0 1092 aa11.33□□□□□ -0.6
RTF1-206ENST00000560447 DENND2AQ9ULE3 1009 aa11.33□□□□□ -0.6
RTF1-206ENST00000560447 HPS5Q9UPZ3 1129 aa11.33□□□□□ -0.6
RTF1-206ENST00000560447 LAMB1P07942 1786 aa11.33□□□□□ -0.6
RTF1-206ENST00000560447 CACNA1SQ13698 1873 aa11.32□□□□□ -0.6
RTF1-206ENST00000560447 STK25O00506 426 aa11.32□□□□□ -0.6
RTF1-206ENST00000560447 FDPSP14324 419 aaKnown RBP11.32□□□□□ -0.6
RTF1-206ENST00000560447 LIG1P18858 919 aa11.32□□□□□ -0.6
RTF1-206ENST00000560447 HAND2P61296 217 aa11.32□□□□□ -0.6
RTF1-206ENST00000560447 CCT2P78371 535 aaKnown RBP11.32□□□□□ -0.6
RTF1-206ENST00000560447 SART3Q15020 963 aaKnown RBP11.32□□□□□ -0.6
RTF1-206ENST00000560447 AKNAD1Q5T1N1 836 aa11.32□□□□□ -0.6
RTF1-206ENST00000560447 GIMAP6Q6P9H5 292 aa11.32□□□□□ -0.6
RTF1-206ENST00000560447 TMEM92Q6UXU6 159 aa11.32□□□□□ -0.6
RTF1-206ENST00000560447 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.32□□□□□ -0.6
RTF1-206ENST00000560447 CCDC73Q6ZRK6 1079 aa11.32□□□□□ -0.6
RTF1-206ENST00000560447 RNF214Q8ND24 703 aa11.32□□□□□ -0.6
RTF1-206ENST00000560447 BICD2Q8TD16 824 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms