RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 TNNI2P48788 182 aa14.33□□□□□ -0.12
RABGGTA-216ENST00000560243 MECOMQ03112 1051 aa14.33□□□□□ -0.12
RABGGTA-216ENST00000560243 NFIAQ12857 509 aa14.33□□□□□ -0.12
RABGGTA-216ENST00000560243 DZIP1Q86YF9 867 aaKnown RBP14.33□□□□□ -0.12
RABGGTA-216ENST00000560243 ZGPATQ8N5A5 531 aaKnown RBP14.33□□□□□ -0.12
RABGGTA-216ENST00000560243 MYO5AQ9Y4I1 1855 aaKnown RBP14.33□□□□□ -0.12
RABGGTA-216ENST00000560243 APBB1O00213 710 aa14.32□□□□□ -0.12
RABGGTA-216ENST00000560243 UQCRFS1P1P0C7P4 283 aa14.32□□□□□ -0.12
RABGGTA-216ENST00000560243 TCP10Q12799 353 aa14.32□□□□□ -0.12
RABGGTA-216ENST00000560243 TTC39AQ5SRH9 613 aa14.32□□□□□ -0.12
RABGGTA-216ENST00000560243 FKBP1CQ5VVH2 108 aa14.32□□□□□ -0.12
RABGGTA-216ENST00000560243 RPAP2Q8IXW5 612 aaPredicted RBP14.32□□□□□ -0.12
RABGGTA-216ENST00000560243 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.32□□□□□ -0.12
RABGGTA-216ENST00000560243 IL1RAPL2Q9NP60 686 aa14.32□□□□□ -0.12
RABGGTA-216ENST00000560243 USP40Q9NVE5 1235 aa14.32□□□□□ -0.12
RABGGTA-216ENST00000560243 TMOD2Q9NZR1 351 aa14.32□□□□□ -0.12
RABGGTA-216ENST00000560243 CASP8AP2Q9UKL3 1982 aa14.32□□□□□ -0.12
RABGGTA-216ENST00000560243 GAKO14976 1311 aa14.32□□□□□ -0.12
RABGGTA-216ENST00000560243 SPRYD7Q5W111 196 aa14.31□□□□□ -0.12
RABGGTA-216ENST00000560243 SPTY2D1Q68D10 685 aaPredicted RBP14.31□□□□□ -0.12
RABGGTA-216ENST00000560243 ERICH6Q7L0X2 663 aa14.31□□□□□ -0.12
RABGGTA-216ENST00000560243 FAM83AQ86UY5 434 aa14.31□□□□□ -0.12
RABGGTA-216ENST00000560243 ZFPM1Q8IX07 1006 aa14.31□□□□□ -0.12
RABGGTA-216ENST00000560243 TNS4Q8IZW8 715 aa14.31□□□□□ -0.12
RABGGTA-216ENST00000560243 SLC10A4Q96EP9 437 aa14.31□□□□□ -0.12
RABGGTA-216ENST00000560243 RNF186Q9NXI6 227 aa14.31□□□□□ -0.12
RABGGTA-216ENST00000560243 FAM198AQ9UFP1 575 aa14.31□□□□□ -0.12
RABGGTA-216ENST00000560243 AK9Q5TCS8 1911 aa14.31□□□□□ -0.12
RABGGTA-216ENST00000560243 CA12O43570 354 aa14.3□□□□□ -0.12
RABGGTA-216ENST00000560243 TRPA1O75762 1119 aa14.3□□□□□ -0.12
RABGGTA-216ENST00000560243 GJA5P36382 358 aa14.3□□□□□ -0.12
RABGGTA-216ENST00000560243 IREB2P48200 963 aaKnown RBP14.3□□□□□ -0.12
RABGGTA-216ENST00000560243 CCDC158Q5M9N0 1113 aa14.3□□□□□ -0.12
RABGGTA-216ENST00000560243 IFFO2Q5TF58 517 aa14.3□□□□□ -0.12
RABGGTA-216ENST00000560243 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.3□□□□□ -0.12
RABGGTA-216ENST00000560243 AACSQ86V21 672 aa14.3□□□□□ -0.12
RABGGTA-216ENST00000560243 RHPN1Q8TCX5 695 aa14.3□□□□□ -0.12
RABGGTA-216ENST00000560243 NSUN4Q96CB9 384 aaKnown RBP14.3□□□□□ -0.12
RABGGTA-216ENST00000560243 FAM163AQ96GL9 167 aaPredicted RBP14.3□□□□□ -0.12
RABGGTA-216ENST00000560243 MROH7-TTC4A0A0A0MT08 1334 aa14.3□□□□□ -0.12
RABGGTA-216ENST00000560243 HMMRO75330 724 aa14.29□□□□□ -0.12
RABGGTA-216ENST00000560243 CYP2E1P05181 493 aaPredicted RBP14.29□□□□□ -0.12
RABGGTA-216ENST00000560243 BTDP43251 543 aa14.29□□□□□ -0.12
RABGGTA-216ENST00000560243 ZAP70P43403 619 aa14.29□□□□□ -0.12
RABGGTA-216ENST00000560243 ERC1Q8IUD2 1116 aa14.29□□□□□ -0.12
RABGGTA-216ENST00000560243 ANKRD13AQ8IZ07 590 aa14.29□□□□□ -0.12
RABGGTA-216ENST00000560243 FAM151AQ8WW52 585 aa14.29□□□□□ -0.12
RABGGTA-216ENST00000560243 CNKSR2Q8WXI2 1034 aa14.29□□□□□ -0.12
RABGGTA-216ENST00000560243 WNK4Q96J92 1243 aa14.29□□□□□ -0.12
RABGGTA-216ENST00000560243 ZNF512BQ96KM6 892 aaPredicted RBP14.29□□□□□ -0.12
RABGGTA-216ENST00000560243 BCL11AQ9H165 835 aa14.29□□□□□ -0.12
RABGGTA-216ENST00000560243 ELP3Q9H9T3 547 aa14.29□□□□□ -0.12
RABGGTA-216ENST00000560243 PIH1D3Q9NQM4 214 aaKnown RBP14.29□□□□□ -0.12
RABGGTA-216ENST00000560243 RAI14Q9P0K7 980 aa14.29□□□□□ -0.12
RABGGTA-216ENST00000560243 NDUFB9Q9Y6M9 179 aa14.29□□□□□ -0.12
RABGGTA-216ENST00000560243 RFX7Q2KHR2 1363 aa14.29□□□□□ -0.12
RABGGTA-216ENST00000560243 GPR75-ASB3A0A0A6YYF3 556 aa14.28□□□□□ -0.12
RABGGTA-216ENST00000560243 WDHD1O75717 1129 aaPredicted RBP14.28□□□□□ -0.12
RABGGTA-216ENST00000560243 RGS3P49796 1198 aa14.28□□□□□ -0.12
RABGGTA-216ENST00000560243 RHBDL3P58872 404 aa14.28□□□□□ -0.12
RABGGTA-216ENST00000560243 VGLL4Q14135 290 aa14.28□□□□□ -0.12
RABGGTA-216ENST00000560243 HSP90AB4PQ58FF6 505 aa14.28□□□□□ -0.12
RABGGTA-216ENST00000560243 MIGA2Q7L4E1 593 aa14.28□□□□□ -0.12
RABGGTA-216ENST00000560243 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.28□□□□□ -0.121e-6■□□□□ 11.1
RABGGTA-216ENST00000560243 RPAP1Q9BWH6 1393 aaPredicted RBP14.28□□□□□ -0.12
RABGGTA-216ENST00000560243 CHMP4BQ9H444 224 aaKnown RBP14.28□□□□□ -0.12
RABGGTA-216ENST00000560243 DDX4Q9NQI0 724 aaKnown RBP14.28□□□□□ -0.12
RABGGTA-216ENST00000560243 LRP2BPQ9P2M1 347 aa14.28□□□□□ -0.12
RABGGTA-216ENST00000560243 SLURP2P0DP57 97 aa14.27□□□□□ -0.13
RABGGTA-216ENST00000560243 TM4SF4P48230 202 aa14.27□□□□□ -0.13
RABGGTA-216ENST00000560243 RRP1P56182 461 aaKnown RBP14.27□□□□□ -0.13
RABGGTA-216ENST00000560243 MAP3K9P80192 1104 aa14.27□□□□□ -0.13
RABGGTA-216ENST00000560243 SH3BP5LQ7L8J4 393 aa14.27□□□□□ -0.13
RABGGTA-216ENST00000560243 SLF2Q8IX21 1173 aa14.27□□□□□ -0.13
RABGGTA-216ENST00000560243 ZKSCAN4Q969J2 545 aaPredicted RBP14.27□□□□□ -0.13
RABGGTA-216ENST00000560243 IDI2Q9BXS1 227 aa14.27□□□□□ -0.13
RABGGTA-216ENST00000560243 SAGE1Q9NXZ1 904 aa14.27□□□□□ -0.13
RABGGTA-216ENST00000560243 LAMB1P07942 1786 aa14.27□□□□□ -0.13
RABGGTA-216ENST00000560243 UNCXA6NJT0 531 aa14.26□□□□□ -0.13
RABGGTA-216ENST00000560243 GSTO1P78417 241 aa14.26□□□□□ -0.13
RABGGTA-216ENST00000560243 PICALMQ13492 652 aa14.26□□□□□ -0.13
RABGGTA-216ENST00000560243 ADGRA1Q86SQ6 560 aa14.26□□□□□ -0.13
RABGGTA-216ENST00000560243 REM2Q8IYK8 340 aaPredicted RBP14.26□□□□□ -0.13
RABGGTA-216ENST00000560243 OPTNQ96CV9 577 aa14.26□□□□□ -0.13
RABGGTA-216ENST00000560243 KIF1BPQ96EK5 621 aa14.26□□□□□ -0.13
RABGGTA-216ENST00000560243 WRNIP1Q96S55 665 aa14.26□□□□□ -0.13
RABGGTA-216ENST00000560243 ANTXR1Q9H6X2 564 aa14.26□□□□□ -0.13
RABGGTA-216ENST00000560243 MAST2Q6P0Q8 1798 aa14.26□□□□□ -0.13
RABGGTA-216ENST00000560243 ATRNL1Q5VV63 1379 aa14.25□□□□□ -0.13
RABGGTA-216ENST00000560243 DOCK2Q92608 1830 aa14.25□□□□□ -0.13
RABGGTA-216ENST00000560243 ENTPD3O75355 529 aa14.25□□□□□ -0.13
RABGGTA-216ENST00000560243 TBC1D8O95759 1140 aa14.25□□□□□ -0.13
RABGGTA-216ENST00000560243 LDHCP07864 332 aa14.25□□□□□ -0.13
RABGGTA-216ENST00000560243 ZBTB48P10074 688 aaPredicted RBP14.25□□□□□ -0.13
RABGGTA-216ENST00000560243 INPP5BP32019 993 aa14.25□□□□□ -0.13
RABGGTA-216ENST00000560243 R3HDMLQ9H3Y0 253 aa14.25□□□□□ -0.13
RABGGTA-216ENST00000560243 SNCAIPQ9Y6H5 919 aa14.25□□□□□ -0.13
RABGGTA-216ENST00000560243 DDTLA6NHG4 134 aaPredicted RBP14.24□□□□□ -0.13
RABGGTA-216ENST00000560243 MANSC4A6NHS7 340 aaPredicted RBP14.24□□□□□ -0.13
RABGGTA-216ENST00000560243 IGF2BP3O00425 579 aaKnown RBP eCLIP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms