RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 CTU1Q7Z7A3 348 aaKnown RBP28.69■■■□□ 2.18
CRNDE-209ENST00000560208 IFNL1Q8IU54 200 aa28.69■■■□□ 2.18
CRNDE-209ENST00000560208 ZGPATQ8N5A5 531 aaKnown RBP28.69■■■□□ 2.18
CRNDE-209ENST00000560208 ZNF296Q8WUU4 475 aaPredicted RBP28.69■■■□□ 2.18
CRNDE-209ENST00000560208 NEUROD6Q96NK8 337 aa28.69■■■□□ 2.18
CRNDE-209ENST00000560208 CFHR5Q9BXR6 569 aa28.69■■■□□ 2.18
CRNDE-209ENST00000560208 GPR25O00155 361 aa28.68■■■□□ 2.18
CRNDE-209ENST00000560208 CDC42EP5Q6NZY7 148 aa28.68■■■□□ 2.18
CRNDE-209ENST00000560208 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.68■■■□□ 2.18
CRNDE-209ENST00000560208 OPTNQ96CV9 577 aa28.68■■■□□ 2.18
CRNDE-209ENST00000560208 COG6Q9Y2V7 657 aa28.68■■■□□ 2.18
CRNDE-209ENST00000560208 NOM1Q5C9Z4 860 aaKnown RBP28.67■■■□□ 2.18
CRNDE-209ENST00000560208 C20orf194Q5TEA3 1177 aa28.67■■■□□ 2.18
CRNDE-209ENST00000560208 HOOK2Q96ED9 719 aa28.67■■■□□ 2.18
CRNDE-209ENST00000560208 R3HDMLQ9H3Y0 253 aa28.67■■■□□ 2.18
CRNDE-209ENST00000560208 C1orf115Q9H7X2 142 aa28.67■■■□□ 2.18
CRNDE-209ENST00000560208 VGLL4Q14135 290 aa28.66■■■□□ 2.18
CRNDE-209ENST00000560208 CSADQ9Y600 493 aa28.66■■■□□ 2.18
CRNDE-209ENST00000560208 PDS5AQ29RF7 1337 aaKnown RBP28.66■■■□□ 2.18
CRNDE-209ENST00000560208 IGF2BP3O00425 579 aaKnown RBP eCLIP28.65■■■□□ 2.18
CRNDE-209ENST00000560208 POLA2Q14181 598 aa28.65■■■□□ 2.18
CRNDE-209ENST00000560208 FAM151AQ8WW52 585 aa28.65■■■□□ 2.18
CRNDE-209ENST00000560208 ABCF2Q9UG63 623 aa28.65■■■□□ 2.18
CRNDE-209ENST00000560208 RPAP1Q9BWH6 1393 aaPredicted RBP28.64■■■□□ 2.18
CRNDE-209ENST00000560208 ZBTB7BO15156 539 aaPredicted RBP28.64■■■□□ 2.18
CRNDE-209ENST00000560208 ATP8B2P98198 1209 aa28.64■■■□□ 2.18
CRNDE-209ENST00000560208 GORABQ5T7V8 394 aa28.64■■■□□ 2.18
CRNDE-209ENST00000560208 USP40Q9NVE5 1235 aa28.64■■■□□ 2.18
CRNDE-209ENST00000560208 TCP10Q12799 353 aa28.63■■■□□ 2.17
CRNDE-209ENST00000560208 SPTY2D1Q68D10 685 aaPredicted RBP28.63■■■□□ 2.17
CRNDE-209ENST00000560208 CNKSR2Q8WXI2 1034 aa28.63■■■□□ 2.17
CRNDE-209ENST00000560208 TESPA1A2RU30 521 aaPredicted RBP28.62■■■□□ 2.17
CRNDE-209ENST00000560208 FKTNO75072 461 aa28.62■■■□□ 2.17
CRNDE-209ENST00000560208 NFIAQ12857 509 aa28.62■■■□□ 2.17
CRNDE-209ENST00000560208 DCAF15Q66K64 600 aa28.62■■■□□ 2.17
CRNDE-209ENST00000560208 OTUD7BQ6GQQ9 843 aa28.62■■■□□ 2.17
CRNDE-209ENST00000560208 DZIP1Q86YF9 867 aaKnown RBP28.62■■■□□ 2.17
CRNDE-209ENST00000560208 SSH3Q8TE77 659 aa28.62■■■□□ 2.17
CRNDE-209ENST00000560208 WRNIP1Q96S55 665 aa28.62■■■□□ 2.17
CRNDE-209ENST00000560208 RRP1P56182 461 aaKnown RBP28.61■■■□□ 2.17
CRNDE-209ENST00000560208 MIGA2Q7L4E1 593 aa28.61■■■□□ 2.17
CRNDE-209ENST00000560208 MS4A4AQ96JQ5 239 aa28.61■■■□□ 2.17
CRNDE-209ENST00000560208 PTPN18Q99952 460 aa28.61■■■□□ 2.17
CRNDE-209ENST00000560208 PDE3AQ14432 1141 aa28.6■■■□□ 2.17
CRNDE-209ENST00000560208 SLF2Q8IX21 1173 aa28.6■■■□□ 2.17
CRNDE-209ENST00000560208 ZNF341Q9BYN7 854 aa28.6■■■□□ 2.17
CRNDE-209ENST00000560208 HMG20BQ9P0W2 317 aa28.6■■■□□ 2.17
CRNDE-209ENST00000560208 FAM198AQ9UFP1 575 aa28.6■■■□□ 2.17
CRNDE-209ENST00000560208 DDX19BQ9UMR2 479 aa28.6■■■□□ 2.17
CRNDE-209ENST00000560208 GAKO14976 1311 aa28.6■■■□□ 2.17
CRNDE-209ENST00000560208 OS9Q13438 667 aaPredicted RBP28.59■■■□□ 2.17
CRNDE-209ENST00000560208 PKN2Q16513 984 aaKnown RBP28.59■■■□□ 2.17
CRNDE-209ENST00000560208 ERICH6Q7L0X2 663 aa28.59■■■□□ 2.17
CRNDE-209ENST00000560208 ZKSCAN4Q969J2 545 aaPredicted RBP28.59■■■□□ 2.17
CRNDE-209ENST00000560208 OTUD5Q96G74 571 aa28.59■■■□□ 2.17
CRNDE-209ENST00000560208 SNCAIPQ9Y6H5 919 aa28.59■■■□□ 2.17
CRNDE-209ENST00000560208 SURF6O75683 361 aaKnown RBP28.58■■■□□ 2.17
CRNDE-209ENST00000560208 GTF2A2P52657 109 aa28.58■■■□□ 2.17
CRNDE-209ENST00000560208 SPATA5Q8NB90 893 aa28.58■■■□□ 2.17
CRNDE-209ENST00000560208 FAM163AQ96GL9 167 aaPredicted RBP28.58■■■□□ 2.17
CRNDE-209ENST00000560208 SPDYE5A6NIY4 337 aa28.57■■■□□ 2.16
CRNDE-209ENST00000560208 ARID4AP29374 1257 aaPredicted RBP28.57■■■□□ 2.16
CRNDE-209ENST00000560208 PI16Q6UXB8 463 aa28.57■■■□□ 2.16
CRNDE-209ENST00000560208 ERO1BQ86YB8 467 aa28.57■■■□□ 2.16
CRNDE-209ENST00000560208 GPR108Q9NPR9 543 aa28.57■■■□□ 2.16
CRNDE-209ENST00000560208 CCL15-CCL14A0A0B4J2E2 113 aa28.56■■■□□ 2.16
CRNDE-209ENST00000560208 MECOMQ03112 1051 aa28.56■■■□□ 2.16
CRNDE-209ENST00000560208 CRHR2Q13324 411 aa28.56■■■□□ 2.16
CRNDE-209ENST00000560208 CCL15Q16663 113 aa28.56■■■□□ 2.16
CRNDE-209ENST00000560208 ZFPM1Q8IX07 1006 aa28.56■■■□□ 2.16
CRNDE-209ENST00000560208 BRI3BPQ8WY22 251 aa28.56■■■□□ 2.16
CRNDE-209ENST00000560208 UQCRFS1P1P0C7P4 283 aa28.55■■■□□ 2.16
CRNDE-209ENST00000560208 RGS19P49795 217 aa28.55■■■□□ 2.16
CRNDE-209ENST00000560208 RGS3P49796 1198 aa28.55■■■□□ 2.16
CRNDE-209ENST00000560208 TNNI3KQ59H18 835 aa28.55■■■□□ 2.16
CRNDE-209ENST00000560208 TBC1D9Q6ZT07 1266 aa28.55■■■□□ 2.16
CRNDE-209ENST00000560208 IDI2Q9BXS1 227 aa28.55■■■□□ 2.16
CRNDE-209ENST00000560208 FPGT-TNNI3KV9GXZ4 949 aa28.55■■■□□ 2.16
CRNDE-209ENST00000560208 MROH7-TTC4A0A0A0MT08 1334 aa28.54■■■□□ 2.16
CRNDE-209ENST00000560208 INPP5BP32019 993 aa28.54■■■□□ 2.16
CRNDE-209ENST00000560208 MCAMP43121 646 aa28.54■■■□□ 2.16
CRNDE-209ENST00000560208 NOP58Q9Y2X3 529 aaKnown RBP28.54■■■□□ 2.16
CRNDE-209ENST00000560208 ENTPD3O75355 529 aa28.53■■■□□ 2.16
CRNDE-209ENST00000560208 BTDP43251 543 aa28.53■■■□□ 2.16
CRNDE-209ENST00000560208 ZNF384Q8TF68 577 aa28.53■■■□□ 2.16
CRNDE-209ENST00000560208 ZNF112Q9UJU3 913 aa28.53■■■□□ 2.16
CRNDE-209ENST00000560208 HPS5Q9UPZ3 1129 aa28.53■■■□□ 2.16
CRNDE-209ENST00000560208 DOCK2Q92608 1830 aa28.52■■■□□ 2.16
CRNDE-209ENST00000560208 GPR75-ASB3A0A0A6YYF3 556 aa28.51■■■□□ 2.15
CRNDE-209ENST00000560208 IRF6O14896 467 aa28.51■■■□□ 2.15
CRNDE-209ENST00000560208 WDHD1O75717 1129 aaPredicted RBP28.51■■■□□ 2.15
CRNDE-209ENST00000560208 GSTO1P78417 241 aa28.51■■■□□ 2.15
CRNDE-209ENST00000560208 PPIL2Q13356 520 aa28.51■■■□□ 2.15
CRNDE-209ENST00000560208 CCDC158Q5M9N0 1113 aa28.51■■■□□ 2.15
CRNDE-209ENST00000560208 TTC39AQ5SRH9 613 aa28.51■■■□□ 2.15
CRNDE-209ENST00000560208 DBNDD2Q9BQY9 259 aa28.51■■■□□ 2.15
CRNDE-209ENST00000560208 CHMP4BQ9H444 224 aaKnown RBP28.51■■■□□ 2.15
CRNDE-209ENST00000560208 RAI14Q9P0K7 980 aa28.51■■■□□ 2.15
CRNDE-209ENST00000560208 RFX7Q2KHR2 1363 aa28.5■■■□□ 2.15
CRNDE-209ENST00000560208 LDHCP07864 332 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms