RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 NKX2-3Q8TAU0 364 aa24.98■■□□□ 1.59
RABGGTA-214ENST00000560163 DPF3Q92784 378 aa24.98■■□□□ 1.59
RABGGTA-214ENST00000560163 GJB1P08034 283 aa24.97■■□□□ 1.59
RABGGTA-214ENST00000560163 INPP5BP32019 993 aa24.97■■□□□ 1.59
RABGGTA-214ENST00000560163 GRK4P32298 578 aa24.97■■□□□ 1.59
RABGGTA-214ENST00000560163 DCAF15Q66K64 600 aa24.97■■□□□ 1.59
RABGGTA-214ENST00000560163 WDR63Q8IWG1 891 aa24.97■■□□□ 1.59
RABGGTA-214ENST00000560163 ZNF112Q9UJU3 913 aa24.97■■□□□ 1.59
RABGGTA-214ENST00000560163 KCNH4Q9UQ05 1017 aa24.97■■□□□ 1.59
RABGGTA-214ENST00000560163 LAMA3Q16787 3333 aa24.96■■□□□ 1.59
RABGGTA-214ENST00000560163 UTYO14607 1347 aa24.96■■□□□ 1.59
RABGGTA-214ENST00000560163 PDHXO00330 501 aa24.96■■□□□ 1.59
RABGGTA-214ENST00000560163 ECM2O94769 699 aaPredicted RBP24.96■■□□□ 1.59
RABGGTA-214ENST00000560163 NBPF7P0C2Y1 421 aaPredicted RBP24.96■■□□□ 1.59
RABGGTA-214ENST00000560163 HOXD10P28358 340 aa24.96■■□□□ 1.59
RABGGTA-214ENST00000560163 LRRC24Q50LG9 513 aa24.96■■□□□ 1.59
RABGGTA-214ENST00000560163 HHIPL2Q6UWX4 724 aa24.96■■□□□ 1.59
RABGGTA-214ENST00000560163 MIGA2Q7L4E1 593 aa24.96■■□□□ 1.59
RABGGTA-214ENST00000560163 ZNF341Q9BYN7 854 aa24.96■■□□□ 1.59
RABGGTA-214ENST00000560163 TMOD2Q9NZR1 351 aa24.96■■□□□ 1.59
RABGGTA-214ENST00000560163 SUGT1Q9Y2Z0 365 aa24.96■■□□□ 1.59
RABGGTA-214ENST00000560163 CCL5P13501 91 aa24.95■■□□□ 1.58
RABGGTA-214ENST00000560163 BCAMP50895 628 aa24.95■■□□□ 1.58
RABGGTA-214ENST00000560163 RABL6Q3YEC7 729 aaPredicted RBP24.95■■□□□ 1.58
RABGGTA-214ENST00000560163 CAVIN4Q5BKX8 364 aa24.95■■□□□ 1.58
RABGGTA-214ENST00000560163 SRCIN1Q9C0H9 1055 aa24.95■■□□□ 1.58
RABGGTA-214ENST00000560163 PDE8BO95263 885 aa24.94■■□□□ 1.58
RABGGTA-214ENST00000560163 RAET1EQ8TD07 263 aa24.94■■□□□ 1.58
RABGGTA-214ENST00000560163 FRAT2O75474 233 aaPredicted RBP24.93■■□□□ 1.58
RABGGTA-214ENST00000560163 FMNL1O95466 1100 aaPredicted RBP24.93■■□□□ 1.58
RABGGTA-214ENST00000560163 FAM151AQ8WW52 585 aa24.93■■□□□ 1.58
RABGGTA-214ENST00000560163 SPINK5Q9NQ38 1064 aaPredicted RBP24.93■■□□□ 1.58
RABGGTA-214ENST00000560163 MAST3O60307 1309 aa24.92■■□□□ 1.58
RABGGTA-214ENST00000560163 MYPNQ86TC9 1320 aa24.92■■□□□ 1.58
RABGGTA-214ENST00000560163 SLC4A10Q6U841 1118 aa24.92■■□□□ 1.58
RABGGTA-214ENST00000560163 HTATIP2Q9BUP3 242 aa24.92■■□□□ 1.58
RABGGTA-214ENST00000560163 BICC1Q9H694 974 aaKnown RBP24.92■■□□□ 1.58
RABGGTA-214ENST00000560163 BCRP11274 1271 aa24.91■■□□□ 1.58
RABGGTA-214ENST00000560163 METTL24Q5JXM2 366 aa24.91■■□□□ 1.58
RABGGTA-214ENST00000560163 ANKRD44Q8N8A2 993 aa24.91■■□□□ 1.58
RABGGTA-214ENST00000560163 RNF208Q9H0X6 261 aa24.91■■□□□ 1.58
RABGGTA-214ENST00000560163 KIF16BQ96L93 1317 aa24.9■■□□□ 1.58
RABGGTA-214ENST00000560163 FGFR2P21802 821 aa24.9■■□□□ 1.58
RABGGTA-214ENST00000560163 NOL9Q5SY16 702 aaKnown RBP24.9■■□□□ 1.58
RABGGTA-214ENST00000560163 GPAT2Q6NUI2 795 aa24.9■■□□□ 1.58
RABGGTA-214ENST00000560163 ZBTB7BO15156 539 aaPredicted RBP24.89■■□□□ 1.58
RABGGTA-214ENST00000560163 PRKCZQ05513 592 aa24.89■■□□□ 1.58
RABGGTA-214ENST00000560163 U2AF1L4Q8WU68 220 aaKnown RBP24.89■■□□□ 1.58
RABGGTA-214ENST00000560163 MGAMO43451 1857 aa24.88■■□□□ 1.57
RABGGTA-214ENST00000560163 GABRQQ9UN88 632 aa24.88■■□□□ 1.57
RABGGTA-214ENST00000560163 SALL2Q9Y467 1007 aaPredicted RBP24.88■■□□□ 1.57
RABGGTA-214ENST00000560163 NR2E3Q9Y5X4 410 aa24.88■■□□□ 1.57
RABGGTA-214ENST00000560163 UBXN2AP68543 259 aa24.87■■□□□ 1.57
RABGGTA-214ENST00000560163 CDC42EP5Q6NZY7 148 aa24.87■■□□□ 1.57
RABGGTA-214ENST00000560163 CXCL11O14625 94 aa24.86■■□□□ 1.57
RABGGTA-214ENST00000560163 SGPL1O95470 568 aa24.86■■□□□ 1.57
RABGGTA-214ENST00000560163 CYP2C8P10632 490 aa24.86■■□□□ 1.57
RABGGTA-214ENST00000560163 FCGRTP55899 365 aa24.86■■□□□ 1.57
RABGGTA-214ENST00000560163 TCP10Q12799 353 aa24.86■■□□□ 1.57
RABGGTA-214ENST00000560163 NFIAQ12857 509 aa24.86■■□□□ 1.57
RABGGTA-214ENST00000560163 SLAIN1Q8ND83 568 aa24.86■■□□□ 1.57
RABGGTA-214ENST00000560163 KLHDC4Q8TBB5 520 aa24.86■■□□□ 1.57
RABGGTA-214ENST00000560163 PARK7Q99497 189 aaKnown RBP24.86■■□□□ 1.57
RABGGTA-214ENST00000560163 UNC93B1Q9H1C4 597 aa24.86■■□□□ 1.57
RABGGTA-214ENST00000560163 BIN2Q9UBW5 565 aaPredicted RBP24.86■■□□□ 1.57
RABGGTA-214ENST00000560163 FAM198AQ9UFP1 575 aa24.86■■□□□ 1.57
RABGGTA-214ENST00000560163 DAGLAQ9Y4D2 1042 aa24.86■■□□□ 1.57
RABGGTA-214ENST00000560163 FARP2O94887 1054 aaPredicted RBP24.85■■□□□ 1.57
RABGGTA-214ENST00000560163 A0A1W2PPC1 479 aa24.84■■□□□ 1.57
RABGGTA-214ENST00000560163 PUM3Q15397 648 aaKnown RBP24.84■■□□□ 1.57
RABGGTA-214ENST00000560163 WDR66Q8TBY9 1149 aa24.84■■□□□ 1.57
RABGGTA-214ENST00000560163 PHF20L1A8MW92 1017 aa24.83■■□□□ 1.57
RABGGTA-214ENST00000560163 IFIT1P09914 478 aaKnown RBP24.83■■□□□ 1.57
RABGGTA-214ENST00000560163 DIXDC1Q155Q3 683 aa24.83■■□□□ 1.57
RABGGTA-214ENST00000560163 ZFPM1Q8IX07 1006 aa24.83■■□□□ 1.57
RABGGTA-214ENST00000560163 ATRNL1Q5VV63 1379 aa24.82■■□□□ 1.56
RABGGTA-214ENST00000560163 DLL1O00548 723 aa24.82■■□□□ 1.56
RABGGTA-214ENST00000560163 SOX1O00570 391 aaPredicted RBP24.82■■□□□ 1.56
RABGGTA-214ENST00000560163 SLC17A8Q8NDX2 589 aa24.82■■□□□ 1.56
RABGGTA-214ENST00000560163 AK9Q5TCS8 1911 aa24.82■■□□□ 1.56
RABGGTA-214ENST00000560163 A0A0G2JLL6 359 aaPredicted RBP24.81■■□□□ 1.56
RABGGTA-214ENST00000560163 ADCY3O60266 1144 aa24.81■■□□□ 1.56
RABGGTA-214ENST00000560163 CAPN2P17655 700 aa24.81■■□□□ 1.56
RABGGTA-214ENST00000560163 PRRT2Q7Z6L0 340 aaPredicted RBP24.81■■□□□ 1.56
RABGGTA-214ENST00000560163 PXYLP1Q8TE99 480 aa24.81■■□□□ 1.56
RABGGTA-214ENST00000560163 MYH13Q9UKX3 1938 aa24.8■■□□□ 1.56
RABGGTA-214ENST00000560163 PRDX5P30044 214 aa24.8■■□□□ 1.56
RABGGTA-214ENST00000560163 FLT3LGP49771 235 aa24.8■■□□□ 1.56
RABGGTA-214ENST00000560163 FASTKD5Q7L8L6 764 aaKnown RBP24.8■■□□□ 1.56
RABGGTA-214ENST00000560163 RFX5P48382 616 aaPredicted RBP24.79■■□□□ 1.56
RABGGTA-214ENST00000560163 MAP3K10Q02779 954 aa24.79■■□□□ 1.56
RABGGTA-214ENST00000560163 IRF5Q13568 498 aa24.79■■□□□ 1.56
RABGGTA-214ENST00000560163 LPIN2Q92539 896 aa24.79■■□□□ 1.56
RABGGTA-214ENST00000560163 USP44Q9H0E7 712 aa24.79■■□□□ 1.56
RABGGTA-214ENST00000560163 PAK6Q9NQU5 681 aaPredicted RBP24.79■■□□□ 1.56
RABGGTA-214ENST00000560163 USP40Q9NVE5 1235 aa24.79■■□□□ 1.56
RABGGTA-214ENST00000560163 SLC45A1Q9Y2W3 748 aa24.79■■□□□ 1.56
RABGGTA-214ENST00000560163 AFG3L2Q9Y4W6 797 aa24.79■■□□□ 1.56
RABGGTA-214ENST00000560163 ZHX2Q9Y6X8 837 aa24.79■■□□□ 1.56
RABGGTA-214ENST00000560163 EVI5O60447 810 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms