RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 MRIQ9BWK5 157 aa14.55□□□□□ -0.08
HERC1-205ENST00000559886 MYO3BQ8WXR4 1341 aa14.54□□□□□ -0.08
HERC1-205ENST00000559886 UTRNP46939 3433 aa14.54□□□□□ -0.08
HERC1-205ENST00000559886 PSMD14O00487 310 aa14.54□□□□□ -0.08
HERC1-205ENST00000559886 BAG3O95817 575 aa14.54□□□□□ -0.08
HERC1-205ENST00000559886 CYP21A2P08686 494 aa14.54□□□□□ -0.08
HERC1-205ENST00000559886 RABEP1Q15276 862 aa14.54□□□□□ -0.08
HERC1-205ENST00000559886 RSBN1LQ6PCB5 846 aaPredicted RBP14.54□□□□□ -0.08
HERC1-205ENST00000559886 ARHGAP27Q6ZUM4 889 aa14.54□□□□□ -0.08
HERC1-205ENST00000559886 IFNL3Q8IZI9 196 aa14.54□□□□□ -0.08
HERC1-205ENST00000559886 EPB41L4AQ9HCS5 686 aaPredicted RBP14.54□□□□□ -0.08
HERC1-205ENST00000559886 ADAMTSL1Q8N6G6 1762 aa14.54□□□□□ -0.08
HERC1-205ENST00000559886 HDLBPQ00341 1268 aaKnown RBP14.54□□□□□ -0.08
HERC1-205ENST00000559886 CXCL9Q07325 125 aa14.54□□□□□ -0.08
HERC1-205ENST00000559886 HHIPL2Q6UWX4 724 aa14.54□□□□□ -0.08
HERC1-205ENST00000559886 KIAA0825Q8IV33 1275 aa14.54□□□□□ -0.08
HERC1-205ENST00000559886 NOL10Q9BSC4 688 aaKnown RBP14.54□□□□□ -0.08
HERC1-205ENST00000559886 DAGLAQ9Y4D2 1042 aa14.54□□□□□ -0.08
HERC1-205ENST00000559886 YBX3P16989 372 aaKnown RBP eCLIP14.53□□□□□ -0.08
HERC1-205ENST00000559886 GMLQ99445 158 aa14.53□□□□□ -0.08
HERC1-205ENST00000559886 CRNKL1Q9BZJ0 848 aaKnown RBP14.53□□□□□ -0.08
HERC1-205ENST00000559886 NACAP1Q9BZK3 213 aa14.53□□□□□ -0.08
HERC1-205ENST00000559886 FOCADQ5VW36 1801 aa14.53□□□□□ -0.08
HERC1-205ENST00000559886 BTDP43251 543 aa14.53□□□□□ -0.08
HERC1-205ENST00000559886 SCNN1DP51172 638 aa14.53□□□□□ -0.08
HERC1-205ENST00000559886 SDR42E1Q8WUS8 393 aa14.53□□□□□ -0.08
HERC1-205ENST00000559886 TEKT1Q969V4 418 aa14.53□□□□□ -0.08
HERC1-205ENST00000559886 TAF6LQ9Y6J9 622 aa14.53□□□□□ -0.08
HERC1-205ENST00000559886 ECM29Q5VYK3 1845 aa14.53□□□□□ -0.08
HERC1-205ENST00000559886 IMMTQ16891 758 aaKnown RBP14.52□□□□□ -0.08
HERC1-205ENST00000559886 GIMAP6Q6P9H5 292 aa14.52□□□□□ -0.08
HERC1-205ENST00000559886 NAPBQ9H115 298 aa14.52□□□□□ -0.08
HERC1-205ENST00000559886 FZD9O00144 591 aa14.52□□□□□ -0.09
HERC1-205ENST00000559886 PLCG2P16885 1265 aa14.52□□□□□ -0.09
HERC1-205ENST00000559886 LMNB1P20700 586 aa14.52□□□□□ -0.09
HERC1-205ENST00000559886 CIAPIN1Q6FI81 312 aa14.52□□□□□ -0.09
HERC1-205ENST00000559886 SH3RF3Q8TEJ3 882 aaPredicted RBP14.52□□□□□ -0.09
HERC1-205ENST00000559886 TM6SF1Q9BZW5 370 aa14.52□□□□□ -0.09
HERC1-205ENST00000559886 CRKP46108 304 aa14.51□□□□□ -0.09
HERC1-205ENST00000559886 RHBDL3P58872 404 aa14.51□□□□□ -0.09
HERC1-205ENST00000559886 KRT32Q14532 448 aa14.51□□□□□ -0.09
HERC1-205ENST00000559886 ADCK5Q3MIX3 580 aa14.51□□□□□ -0.09
HERC1-205ENST00000559886 AGBL3Q8NEM8 1001 aa14.51□□□□□ -0.09
HERC1-205ENST00000559886 DDRGK1Q96HY6 314 aa14.51□□□□□ -0.09
HERC1-205ENST00000559886 ZDHHC15Q96MV8 337 aa14.51□□□□□ -0.09
HERC1-205ENST00000559886 ATP8A2Q9NTI2 1148 aa14.51□□□□□ -0.09
HERC1-205ENST00000559886 SERPINA10Q9UK55 444 aa14.51□□□□□ -0.09
HERC1-205ENST00000559886 ZNF213O14771 459 aa14.51□□□□□ -0.09
HERC1-205ENST00000559886 TDO2P48775 406 aa14.51□□□□□ -0.09
HERC1-205ENST00000559886 TNIP1Q15025 636 aa14.51□□□□□ -0.09
HERC1-205ENST00000559886 NAV1Q8NEY1 1877 aa14.51□□□□□ -0.09
HERC1-205ENST00000559886 APOBEC3HQ6NTF7 200 aaKnown RBP14.5□□□□□ -0.09
HERC1-205ENST00000559886 IL27Q8NEV9 243 aa14.5□□□□□ -0.09
HERC1-205ENST00000559886 JAKMIP1Q96N16 626 aaKnown RBP14.5□□□□□ -0.09
HERC1-205ENST00000559886 DCP1AQ9NPI6 582 aaPredicted RBP14.5□□□□□ -0.09
HERC1-205ENST00000559886 LAMB1P07942 1786 aa14.5□□□□□ -0.09
HERC1-205ENST00000559886 HAND2P61296 217 aa14.5□□□□□ -0.09
HERC1-205ENST00000559886 ZSWIM6Q9HCJ5 1215 aa14.5□□□□□ -0.09
HERC1-205ENST00000559886 MKRN1Q9UHC7 482 aaKnown RBP14.5□□□□□ -0.09
HERC1-205ENST00000559886 ZBTB12Q9Y330 459 aaPredicted RBP14.5□□□□□ -0.09
HERC1-205ENST00000559886 PSMA5P28066 241 aa14.49□□□□□ -0.09
HERC1-205ENST00000559886 NEK4P51957 841 aa14.49□□□□□ -0.09
HERC1-205ENST00000559886 EIF6P56537 245 aaKnown RBP14.49□□□□□ -0.09
HERC1-205ENST00000559886 STOX1Q6ZVD7 989 aa14.49□□□□□ -0.09
HERC1-205ENST00000559886 SNX21Q969T3 373 aa14.49□□□□□ -0.09
HERC1-205ENST00000559886 NBPF3Q9H094 633 aa14.49□□□□□ -0.09
HERC1-205ENST00000559886 MYH1P12882 1939 aa14.49□□□□□ -0.09
HERC1-205ENST00000559886 TIAM2Q8IVF5 1701 aa14.49□□□□□ -0.09
HERC1-205ENST00000559886 E7EWF7 191 aa14.49□□□□□ -0.09
HERC1-205ENST00000559886 CASTP20810 708 aaKnown RBP14.49□□□□□ -0.09
HERC1-205ENST00000559886 TEX11Q8IYF3 940 aa14.49□□□□□ -0.09
HERC1-205ENST00000559886 UPF3BQ9BZI7 483 aaKnown RBP14.49□□□□□ -0.09
HERC1-205ENST00000559886 DDX60LQ5H9U9 1706 aaKnown RBP14.48□□□□□ -0.09
HERC1-205ENST00000559886 USP5P45974 858 aa14.48□□□□□ -0.09
HERC1-205ENST00000559886 TGFBRAP1Q8WUH2 860 aa14.48□□□□□ -0.09
HERC1-205ENST00000559886 IPO9Q96P70 1041 aaKnown RBP14.48□□□□□ -0.09
HERC1-205ENST00000559886 HDAC9Q9UKV0 1011 aa14.48□□□□□ -0.09
HERC1-205ENST00000559886 ST18O60284 1047 aa14.48□□□□□ -0.09
HERC1-205ENST00000559886 USP17L8P0C7I0 530 aa14.48□□□□□ -0.09
HERC1-205ENST00000559886 RPS12P25398 132 aaKnown RBP14.48□□□□□ -0.09
HERC1-205ENST00000559886 CDC42EP5Q6NZY7 148 aa14.48□□□□□ -0.09
HERC1-205ENST00000559886 CTR9Q6PD62 1173 aa14.48□□□□□ -0.09
HERC1-205ENST00000559886 RUFY3Q7L099 469 aa14.48□□□□□ -0.09
HERC1-205ENST00000559886 OGFOD1Q8N543 542 aa14.48□□□□□ -0.09
HERC1-205ENST00000559886 NEK1Q96PY6 1258 aa14.48□□□□□ -0.09
HERC1-205ENST00000559886 ANAPC4Q9UJX5 808 aa14.48□□□□□ -0.09
HERC1-205ENST00000559886 CYP46A1Q9Y6A2 500 aa14.48□□□□□ -0.09
HERC1-205ENST00000559886 CD2BP2O95400 341 aaKnown RBP14.47□□□□□ -0.09
HERC1-205ENST00000559886 MMP14P50281 582 aa14.47□□□□□ -0.09
HERC1-205ENST00000559886 RBM5P52756 815 aaKnown RBP eCLIP14.47□□□□□ -0.09
HERC1-205ENST00000559886 CFAP100Q494V2 611 aa14.47□□□□□ -0.09
HERC1-205ENST00000559886 SBK1Q52WX2 424 aa14.47□□□□□ -0.09
HERC1-205ENST00000559886 USP40Q9NVE5 1235 aa14.47□□□□□ -0.09
HERC1-205ENST00000559886 PCDHAC2Q9Y5I4 1007 aa14.47□□□□□ -0.09
HERC1-205ENST00000559886 USP17L12C9JPN9 530 aa14.47□□□□□ -0.09
HERC1-205ENST00000559886 USP17L21D6R901 530 aa14.47□□□□□ -0.09
HERC1-205ENST00000559886 PPARAQ07869 468 aa14.47□□□□□ -0.09
HERC1-205ENST00000559886 COL9A3Q14050 684 aaPredicted RBP14.47□□□□□ -0.09
HERC1-205ENST00000559886 BECN1Q14457 450 aa14.47□□□□□ -0.09
HERC1-205ENST00000559886 BLOC1S2Q6QNY1 142 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms