RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 MYH2Q9UKX2 1941 aa13.94□□□□□ -0.18
HERC1-204ENST00000559715 ADGRA2Q96PE1 1338 aa13.93□□□□□ -0.18
HERC1-204ENST00000559715 PHIPQ8WWQ0 1821 aa13.93□□□□□ -0.18
HERC1-204ENST00000559715 TLR2O60603 784 aa13.93□□□□□ -0.18
HERC1-204ENST00000559715 INPP5BP32019 993 aa13.93□□□□□ -0.18
HERC1-204ENST00000559715 PUM3Q15397 648 aaKnown RBP13.93□□□□□ -0.18
HERC1-204ENST00000559715 CAVIN4Q5BKX8 364 aa13.93□□□□□ -0.18
HERC1-204ENST00000559715 VPS37DQ86XT2 251 aa13.93□□□□□ -0.18
HERC1-204ENST00000559715 ZFYVE28Q9HCC9 887 aa13.93□□□□□ -0.18
HERC1-204ENST00000559715 ZCCHC17Q9NP64 241 aaKnown RBP13.93□□□□□ -0.18
HERC1-204ENST00000559715 ATRNL1Q5VV63 1379 aa13.93□□□□□ -0.18
HERC1-204ENST00000559715 MGAMO43451 1857 aa13.93□□□□□ -0.18
HERC1-204ENST00000559715 A0A0C4DFX4 3053 aa13.92□□□□□ -0.18
HERC1-204ENST00000559715 ZBTB22O15209 634 aa13.92□□□□□ -0.18
HERC1-204ENST00000559715 NFIAQ12857 509 aa13.92□□□□□ -0.18
HERC1-204ENST00000559715 PPIL2Q13356 520 aa13.92□□□□□ -0.18
HERC1-204ENST00000559715 CDC42EP5Q6NZY7 148 aa13.92□□□□□ -0.18
HERC1-204ENST00000559715 C17orf99Q6UX52 265 aa13.92□□□□□ -0.18
HERC1-204ENST00000559715 MIGA2Q7L4E1 593 aa13.92□□□□□ -0.18
HERC1-204ENST00000559715 ZFPM1Q8IX07 1006 aa13.92□□□□□ -0.18
HERC1-204ENST00000559715 CDCA7LQ96GN5 454 aa13.92□□□□□ -0.18
HERC1-204ENST00000559715 WRNIP1Q96S55 665 aa13.92□□□□□ -0.18
HERC1-204ENST00000559715 FAM198AQ9UFP1 575 aa13.92□□□□□ -0.18
HERC1-204ENST00000559715 DAGLAQ9Y4D2 1042 aa13.92□□□□□ -0.18
HERC1-204ENST00000559715 CSADQ9Y600 493 aa13.92□□□□□ -0.18
HERC1-204ENST00000559715 DOCK3Q8IZD9 2030 aa13.91□□□□□ -0.18
HERC1-204ENST00000559715 CETPP11597 493 aa13.91□□□□□ -0.18
HERC1-204ENST00000559715 PRDX5P30044 214 aa13.91□□□□□ -0.18
HERC1-204ENST00000559715 LACTBP83111 547 aaPredicted RBP13.91□□□□□ -0.18
HERC1-204ENST00000559715 DIXDC1Q155Q3 683 aa13.91□□□□□ -0.18
HERC1-204ENST00000559715 HABP4Q5JVS0 413 aaKnown RBP13.91□□□□□ -0.18
HERC1-204ENST00000559715 FAM151AQ8WW52 585 aa13.91□□□□□ -0.18
HERC1-204ENST00000559715 LPIN2Q92539 896 aa13.91□□□□□ -0.18
HERC1-204ENST00000559715 KCNH4Q9UQ05 1017 aa13.91□□□□□ -0.18
HERC1-204ENST00000559715 COL6A3P12111 3177 aa13.91□□□□□ -0.18
HERC1-204ENST00000559715 DOCK2Q92608 1830 aa13.9□□□□□ -0.18
HERC1-204ENST00000559715 E9PSI1 815 aa13.9□□□□□ -0.18
HERC1-204ENST00000559715 IFIT1P09914 478 aaKnown RBP13.9□□□□□ -0.18
HERC1-204ENST00000559715 RFX7Q2KHR2 1363 aa13.9□□□□□ -0.18
HERC1-204ENST00000559715 FRAT2O75474 233 aaPredicted RBP13.89□□□□□ -0.19
HERC1-204ENST00000559715 PPATQ06203 517 aa13.89□□□□□ -0.19
HERC1-204ENST00000559715 SNAPC2Q13487 334 aa13.89□□□□□ -0.19
HERC1-204ENST00000559715 ALDH1L2Q3SY69 923 aa13.89□□□□□ -0.19
HERC1-204ENST00000559715 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.89□□□□□ -0.19
HERC1-204ENST00000559715 WDR66Q8TBY9 1149 aa13.89□□□□□ -0.19
HERC1-204ENST00000559715 SH3TC2Q8TF17 1288 aa13.89□□□□□ -0.19
HERC1-204ENST00000559715 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.89□□□□□ -0.19
HERC1-204ENST00000559715 MAST3O60307 1309 aa13.89□□□□□ -0.19
HERC1-204ENST00000559715 SALL1Q9NSC2 1324 aa13.89□□□□□ -0.19
HERC1-204ENST00000559715 PHF20L1A8MW92 1017 aa13.88□□□□□ -0.19
HERC1-204ENST00000559715 CIAO1O76071 339 aa13.88□□□□□ -0.19
HERC1-204ENST00000559715 SLURP2P0DP57 97 aa13.88□□□□□ -0.19
HERC1-204ENST00000559715 PHKA1P46020 1223 aa13.88□□□□□ -0.19
HERC1-204ENST00000559715 MAP3K10Q02779 954 aa13.88□□□□□ -0.19
HERC1-204ENST00000559715 TCP10Q12799 353 aa13.88□□□□□ -0.19
HERC1-204ENST00000559715 SLC9C1Q4G0N8 1177 aa13.88□□□□□ -0.19
HERC1-204ENST00000559715 NOL9Q5SY16 702 aaKnown RBP13.88□□□□□ -0.19
HERC1-204ENST00000559715 GPAT2Q6NUI2 795 aa13.88□□□□□ -0.19
HERC1-204ENST00000559715 SH3BP5LQ7L8J4 393 aa13.88□□□□□ -0.19
HERC1-204ENST00000559715 TRIM47Q96LD4 638 aa13.88□□□□□ -0.19
HERC1-204ENST00000559715 ZNF341Q9BYN7 854 aa13.88□□□□□ -0.19
HERC1-204ENST00000559715 FBXO3Q9UK99 471 aa13.88□□□□□ -0.19
HERC1-204ENST00000559715 DNAH12Q6ZR08 3092 aa13.88□□□□□ -0.19
HERC1-204ENST00000559715 LAMA2P24043 3122 aaKnown RBP13.87□□□□□ -0.19
HERC1-204ENST00000559715 SLC5A1P13866 664 aa13.87□□□□□ -0.19
HERC1-204ENST00000559715 ADORA1P30542 326 aa13.87□□□□□ -0.19
HERC1-204ENST00000559715 MTFR1Q15390 333 aa13.87□□□□□ -0.19
HERC1-204ENST00000559715 DCAF15Q66K64 600 aa13.87□□□□□ -0.19
HERC1-204ENST00000559715 ANKRD23Q86SG2 305 aa13.87□□□□□ -0.19
HERC1-204ENST00000559715 ZNF384Q8TF68 577 aa13.87□□□□□ -0.19
HERC1-204ENST00000559715 SHISA4Q96DD7 197 aa13.87□□□□□ -0.19
HERC1-204ENST00000559715 TMOD2Q9NZR1 351 aa13.87□□□□□ -0.19
HERC1-204ENST00000559715 PA2G4Q9UQ80 394 aaKnown RBP13.87□□□□□ -0.19
HERC1-204ENST00000559715 BCRP11274 1271 aa13.86□□□□□ -0.19
HERC1-204ENST00000559715 FXR1P51114 621 aaKnown RBP eCLIP13.86□□□□□ -0.19
HERC1-204ENST00000559715 ATP2B3Q16720 1220 aa13.86□□□□□ -0.19
HERC1-204ENST00000559715 UBE2Q1Q7Z7E8 422 aa13.86□□□□□ -0.19
HERC1-204ENST00000559715 POTEDQ86YR6 584 aa13.86□□□□□ -0.19
HERC1-204ENST00000559715 GCC1Q96CN9 775 aa13.86□□□□□ -0.19
HERC1-204ENST00000559715 HOOK2Q96ED9 719 aa13.86□□□□□ -0.19
HERC1-204ENST00000559715 SIL1Q9H173 461 aa13.86□□□□□ -0.19
HERC1-204ENST00000559715 COPRSQ9NQ92 184 aa13.86□□□□□ -0.19
HERC1-204ENST00000559715 CPA4Q9UI42 421 aa13.86□□□□□ -0.19
HERC1-204ENST00000559715 GAKO14976 1311 aa13.86□□□□□ -0.19
HERC1-204ENST00000559715 DOCK1Q14185 1865 aa13.85□□□□□ -0.19
HERC1-204ENST00000559715 PDHXO00330 501 aa13.85□□□□□ -0.19
HERC1-204ENST00000559715 GNRH1P01148 92 aa13.85□□□□□ -0.19
HERC1-204ENST00000559715 NBPF11Q86T75 865 aa13.85□□□□□ -0.19
HERC1-204ENST00000559715 TMEM106CQ9BVX2 250 aa13.85□□□□□ -0.19
HERC1-204ENST00000559715 IDI2Q9BXS1 227 aa13.85□□□□□ -0.19
HERC1-204ENST00000559715 USP40Q9NVE5 1235 aa13.85□□□□□ -0.19
HERC1-204ENST00000559715 SRRDQ9UH36 339 aa13.85□□□□□ -0.19
HERC1-204ENST00000559715 LRRFIP2Q9Y608 721 aaKnown RBP13.85□□□□□ -0.19
HERC1-204ENST00000559715 WDHD1O75717 1129 aaPredicted RBP13.84□□□□□ -0.19
HERC1-204ENST00000559715 MYCP01106 439 aaPredicted RBP13.84□□□□□ -0.19
HERC1-204ENST00000559715 OSBPP22059 807 aa13.84□□□□□ -0.19
HERC1-204ENST00000559715 ARHGEF6Q15052 776 aa13.84□□□□□ -0.19
HERC1-204ENST00000559715 CCDC102BQ68D86 513 aa13.84□□□□□ -0.19
HERC1-204ENST00000559715 FAM163AQ96GL9 167 aaPredicted RBP13.84□□□□□ -0.19
HERC1-204ENST00000559715 MEIS3Q99687 375 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms