RNA–Protein interactions for RNA: ENST00000559545.5

CDK12-204, Transcript of cyclin dependent kinase 12, humanhuman

TSL 5

Gene CDK12, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-204ENST00000559545 USP17L8P0C7I0 530 aa6.78□□□□□ -1.32
CDK12-204ENST00000559545 YY1P25490 414 aa6.78□□□□□ -1.32
CDK12-204ENST00000559545 GTF2F1P35269 517 aaKnown RBP eCLIP6.78□□□□□ -1.32
CDK12-204ENST00000559545 FXR2P51116 673 aaKnown RBP eCLIP6.78□□□□□ -1.32
CDK12-204ENST00000559545 CHRNDQ07001 517 aa6.78□□□□□ -1.32
CDK12-204ENST00000559545 FAM161AQ3B820 660 aa6.78□□□□□ -1.32
CDK12-204ENST00000559545 RTL5Q5HYW3 569 aaPredicted RBP6.78□□□□□ -1.32
CDK12-204ENST00000559545 DPY19L2Q6NUT2 758 aa6.78□□□□□ -1.32
CDK12-204ENST00000559545 DPP8Q6V1X1 898 aaPredicted RBP6.78□□□□□ -1.32
CDK12-204ENST00000559545 CCAR1Q8IX12 1150 aaKnown RBP6.78□□□□□ -1.32
CDK12-204ENST00000559545 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.78□□□□□ -1.32
CDK12-204ENST00000559545 TDRD7Q8NHU6 1098 aaKnown RBP6.78□□□□□ -1.32
CDK12-204ENST00000559545 DDX12PQ92771 950 aa6.78□□□□□ -1.32
CDK12-204ENST00000559545 SPACA7Q96KW9 195 aa6.78□□□□□ -1.32
CDK12-204ENST00000559545 BRINP2Q9C0B6 783 aa6.78□□□□□ -1.32
CDK12-204ENST00000559545 COA1Q9GZY4 146 aa6.78□□□□□ -1.32
CDK12-204ENST00000559545 TMX4Q9H1E5 349 aaPredicted RBP6.78□□□□□ -1.32
CDK12-204ENST00000559545 KLHL42Q9P2K6 505 aa6.78□□□□□ -1.32
CDK12-204ENST00000559545 PRKAG2Q9UGJ0 569 aa6.78□□□□□ -1.32
CDK12-204ENST00000559545 MYH13Q9UKX3 1938 aa6.78□□□□□ -1.32
CDK12-204ENST00000559545 ZNF804BA4D1E1 1349 aa6.77□□□□□ -1.32
CDK12-204ENST00000559545 FAM205AQ6ZU69 1335 aa6.77□□□□□ -1.32
CDK12-204ENST00000559545 TRPM7Q96QT4 1865 aa6.77□□□□□ -1.33
CDK12-204ENST00000559545 SASH1O94885 1247 aa6.77□□□□□ -1.33
CDK12-204ENST00000559545 OATP04181 439 aa6.77□□□□□ -1.33
CDK12-204ENST00000559545 VEGFAP15692 232 aaPredicted RBP6.77□□□□□ -1.33
CDK12-204ENST00000559545 RPS12P25398 132 aaKnown RBP6.77□□□□□ -1.33
CDK12-204ENST00000559545 IL15P40933 162 aaPredicted RBP6.77□□□□□ -1.33
CDK12-204ENST00000559545 RASSF7Q02833 373 aa6.77□□□□□ -1.33
CDK12-204ENST00000559545 CXCL9Q07325 125 aa6.77□□□□□ -1.33
CDK12-204ENST00000559545 RNF187Q5TA31 235 aaPredicted RBP6.77□□□□□ -1.33
CDK12-204ENST00000559545 STRIP1Q5VSL9 837 aa6.77□□□□□ -1.33
CDK12-204ENST00000559545 SIRT2Q8IXJ6 389 aa6.77□□□□□ -1.33
CDK12-204ENST00000559545 AGBL3Q8NEM8 1001 aa6.77□□□□□ -1.33
CDK12-204ENST00000559545 TMC2Q8TDI7 906 aa6.77□□□□□ -1.33
CDK12-204ENST00000559545 ARMC5Q96C12 935 aa6.77□□□□□ -1.33
CDK12-204ENST00000559545 GPATCH3Q96I76 525 aa6.77□□□□□ -1.33
CDK12-204ENST00000559545 ZNF512BQ96KM6 892 aaPredicted RBP6.77□□□□□ -1.33
CDK12-204ENST00000559545 FAM84BQ96KN1 310 aaPredicted RBP6.77□□□□□ -1.33
CDK12-204ENST00000559545 NAP1L5Q96NT1 182 aaPredicted RBP6.77□□□□□ -1.33
CDK12-204ENST00000559545 UCN2Q96RP3 112 aa6.77□□□□□ -1.33
CDK12-204ENST00000559545 PHOX2BQ99453 314 aa6.77□□□□□ -1.33
CDK12-204ENST00000559545 MPHOSPH8Q99549 860 aa6.77□□□□□ -1.33
CDK12-204ENST00000559545 BACH2Q9BYV9 841 aa6.77□□□□□ -1.33
CDK12-204ENST00000559545 PUS3Q9BZE2 481 aaKnown RBP6.77□□□□□ -1.33
CDK12-204ENST00000559545 ZC3H12CQ9C0D7 883 aaKnown RBP6.77□□□□□ -1.33
CDK12-204ENST00000559545 RNF181Q9P0P0 153 aa6.77□□□□□ -1.33
CDK12-204ENST00000559545 GGA1Q9UJY5 639 aa6.77□□□□□ -1.33
CDK12-204ENST00000559545 NOVA2Q9UNW9 492 aaKnown RBP6.77□□□□□ -1.33
CDK12-204ENST00000559545 NSFL1CQ9UNZ2 370 aaKnown RBP6.77□□□□□ -1.33
CDK12-204ENST00000559545 LRRFIP2Q9Y608 721 aaKnown RBP6.77□□□□□ -1.33
CDK12-204ENST00000559545 PDS5AQ29RF7 1337 aaKnown RBP6.76□□□□□ -1.33
CDK12-204ENST00000559545 KDM2BQ8NHM5 1336 aa6.76□□□□□ -1.33
CDK12-204ENST00000559545 PNMA6EA0A0J9YXQ4 647 aa6.76□□□□□ -1.33
CDK12-204ENST00000559545 ATP9BO43861 1147 aa6.76□□□□□ -1.33
CDK12-204ENST00000559545 ZNF280AP59817 542 aaPredicted RBP6.76□□□□□ -1.33
CDK12-204ENST00000559545 FGD1P98174 961 aa6.76□□□□□ -1.33
CDK12-204ENST00000559545 GNL2Q13823 731 aaKnown RBP6.76□□□□□ -1.33
CDK12-204ENST00000559545 TNIP1Q15025 636 aa6.76□□□□□ -1.33
CDK12-204ENST00000559545 CSPP1Q1MSJ5 1256 aa6.76□□□□□ -1.33
CDK12-204ENST00000559545 LRRC24Q50LG9 513 aa6.76□□□□□ -1.33
CDK12-204ENST00000559545 CEP85Q6P2H3 762 aa6.76□□□□□ -1.33
CDK12-204ENST00000559545 APBB1IPQ7Z5R6 666 aaPredicted RBP6.76□□□□□ -1.33
CDK12-204ENST00000559545 TXNRD3Q86VQ6 643 aa6.76□□□□□ -1.33
CDK12-204ENST00000559545 SLC43A3Q8NBI5 491 aa6.76□□□□□ -1.33
CDK12-204ENST00000559545 JDP2Q8WYK2 163 aa6.76□□□□□ -1.33
CDK12-204ENST00000559545 DHX38Q92620 1227 aaKnown RBP6.76□□□□□ -1.33
CDK12-204ENST00000559545 FRAT1Q92837 279 aaPredicted RBP6.76□□□□□ -1.33
CDK12-204ENST00000559545 VTI1AQ96AJ9 217 aa6.76□□□□□ -1.33
CDK12-204ENST00000559545 CD209Q9NNX6 404 aa6.76□□□□□ -1.33
CDK12-204ENST00000559545 ZNF277Q9NRM2 450 aaPredicted RBP6.76□□□□□ -1.33
CDK12-204ENST00000559545 MYO5AQ9Y4I1 1855 aaKnown RBP6.75□□□□□ -1.33
CDK12-204ENST00000559545 WTIPA6NIX2 430 aaPredicted RBP6.75□□□□□ -1.33
CDK12-204ENST00000559545 SPTLC1O15269 473 aa6.75□□□□□ -1.33
CDK12-204ENST00000559545 PARNO95453 639 aaKnown RBP6.75□□□□□ -1.33
CDK12-204ENST00000559545 C7P10643 843 aa6.75□□□□□ -1.33
CDK12-204ENST00000559545 SERPINB4P48594 390 aa6.75□□□□□ -1.33
CDK12-204ENST00000559545 FOXK1P85037 733 aa6.75□□□□□ -1.33
CDK12-204ENST00000559545 HDLBPQ00341 1268 aaKnown RBP6.75□□□□□ -1.33
CDK12-204ENST00000559545 AOC3Q16853 763 aa6.75□□□□□ -1.33
CDK12-204ENST00000559545 SLC51AQ86UW1 340 aa6.75□□□□□ -1.33
CDK12-204ENST00000559545 ZSCAN29Q8IWY8 852 aaPredicted RBP6.75□□□□□ -1.33
CDK12-204ENST00000559545 GPATCH11Q8N954 259 aa6.75□□□□□ -1.33
CDK12-204ENST00000559545 PANK1Q8TE04 598 aa6.75□□□□□ -1.33
CDK12-204ENST00000559545 LPIN2Q92539 896 aa6.75□□□□□ -1.33
CDK12-204ENST00000559545 FAM163AQ96GL9 167 aaPredicted RBP6.75□□□□□ -1.33
CDK12-204ENST00000559545 ZBED3Q96IU2 234 aaPredicted RBP6.75□□□□□ -1.33
CDK12-204ENST00000559545 ZNF594Q96JF6 807 aaPredicted RBP6.75□□□□□ -1.33
CDK12-204ENST00000559545 CCDC136Q96JN2 1154 aa6.75□□□□□ -1.33
CDK12-204ENST00000559545 DCTPP1Q9H773 170 aa6.75□□□□□ -1.33
CDK12-204ENST00000559545 SALL1Q9NSC2 1324 aa6.75□□□□□ -1.33
CDK12-204ENST00000559545 MYH2Q9UKX2 1941 aa6.74□□□□□ -1.33
CDK12-204ENST00000559545 CCDC194A0A1B0GVG4 234 aa6.74□□□□□ -1.33
CDK12-204ENST00000559545 IQCA1LA6NCM1 817 aa6.74□□□□□ -1.33
CDK12-204ENST00000559545 PPIP5K2O43314 1243 aa6.74□□□□□ -1.33
CDK12-204ENST00000559545 TOMM70O94826 608 aa6.74□□□□□ -1.33
CDK12-204ENST00000559545 DDNO94850 711 aaPredicted RBP6.74□□□□□ -1.33
CDK12-204ENST00000559545 SCNN1DP51172 638 aa6.74□□□□□ -1.33
CDK12-204ENST00000559545 RRP1P56182 461 aaKnown RBP6.74□□□□□ -1.33
CDK12-204ENST00000559545 EIF6P56537 245 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms