RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 EXOC6Q8TAG9 804 aa20.77■□□□□ 0.92
PSEN1-224ENST00000559361 TTF2Q9UNY4 1162 aaKnown RBP20.77■□□□□ 0.92
PSEN1-224ENST00000559361 TLR2O60603 784 aa20.76■□□□□ 0.91
PSEN1-224ENST00000559361 LDHAL6AQ6ZMR3 332 aa20.76■□□□□ 0.91
PSEN1-224ENST00000559361 ZNF594Q96JF6 807 aaPredicted RBP20.76■□□□□ 0.91
PSEN1-224ENST00000559361 TMEM39BQ9GZU3 492 aa20.76■□□□□ 0.91
PSEN1-224ENST00000559361 CHMP3Q9Y3E7 222 aa20.76■□□□□ 0.91
PSEN1-224ENST00000559361 SRGAP3O43295 1099 aa20.75■□□□□ 0.91
PSEN1-224ENST00000559361 ATP8B2P98198 1209 aa20.75■□□□□ 0.91
PSEN1-224ENST00000559361 UBE4AQ14139 1066 aa20.75■□□□□ 0.91
PSEN1-224ENST00000559361 SLC4A8Q2Y0W8 1093 aa20.75■□□□□ 0.91
PSEN1-224ENST00000559361 FAM84BQ96KN1 310 aaPredicted RBP20.75■□□□□ 0.91
PSEN1-224ENST00000559361 C1orf115Q9H7X2 142 aa20.75■□□□□ 0.91
PSEN1-224ENST00000559361 ZCCHC17Q9NP64 241 aaKnown RBP20.75■□□□□ 0.91
PSEN1-224ENST00000559361 FBXO3Q9UK99 471 aa20.75■□□□□ 0.91
PSEN1-224ENST00000559361 ZSWIM8A7E2V4 1837 aa20.75■□□□□ 0.91
PSEN1-224ENST00000559361 SPDYE5A6NIY4 337 aa20.74■□□□□ 0.91
PSEN1-224ENST00000559361 H0YGN5 161 aa20.74■□□□□ 0.91
PSEN1-224ENST00000559361 IRX6P78412 446 aaPredicted RBP20.74■□□□□ 0.91
PSEN1-224ENST00000559361 TCP10L2B9ZVM9 353 aa20.73■□□□□ 0.91
PSEN1-224ENST00000559361 GNRH1P01148 92 aa20.73■□□□□ 0.91
PSEN1-224ENST00000559361 HIBADHP31937 336 aaKnown RBP20.73■□□□□ 0.91
PSEN1-224ENST00000559361 CRKP46108 304 aa20.73■□□□□ 0.91
PSEN1-224ENST00000559361 TNNI2P48788 182 aa20.73■□□□□ 0.91
PSEN1-224ENST00000559361 LACTBP83111 547 aaPredicted RBP20.73■□□□□ 0.91
PSEN1-224ENST00000559361 SSH3Q8TE77 659 aa20.73■□□□□ 0.91
PSEN1-224ENST00000559361 ARHGAP39Q9C0H5 1083 aa20.73■□□□□ 0.91
PSEN1-224ENST00000559361 CSADQ9Y600 493 aa20.73■□□□□ 0.91
PSEN1-224ENST00000559361 GYG1P46976 350 aa20.72■□□□□ 0.91
PSEN1-224ENST00000559361 HDLBPQ00341 1268 aaKnown RBP20.72■□□□□ 0.91
PSEN1-224ENST00000559361 POLA2Q14181 598 aa20.72■□□□□ 0.91
PSEN1-224ENST00000559361 TAF7LQ5H9L4 462 aa20.72■□□□□ 0.91
PSEN1-224ENST00000559361 SH3TC2Q8TF17 1288 aa20.72■□□□□ 0.91
PSEN1-224ENST00000559361 CNNM1Q9NRU3 951 aa20.72■□□□□ 0.91
PSEN1-224ENST00000559361 SNCAIPQ9Y6H5 919 aa20.72■□□□□ 0.91
PSEN1-224ENST00000559361 BTBD19C9JJ37 291 aa20.71■□□□□ 0.91
PSEN1-224ENST00000559361 CETPP11597 493 aa20.71■□□□□ 0.91
PSEN1-224ENST00000559361 PRMT2P55345 433 aa20.71■□□□□ 0.91
PSEN1-224ENST00000559361 GRIK5Q16478 980 aa20.71■□□□□ 0.91
PSEN1-224ENST00000559361 ERO1BQ86YB8 467 aa20.71■□□□□ 0.91
PSEN1-224ENST00000559361 COPRSQ9NQ92 184 aa20.71■□□□□ 0.91
PSEN1-224ENST00000559361 PNMA6EA0A0J9YXQ4 647 aa20.69■□□□□ 0.9
PSEN1-224ENST00000559361 IRF6O14896 467 aa20.69■□□□□ 0.9
PSEN1-224ENST00000559361 WDHD1O75717 1129 aaPredicted RBP20.69■□□□□ 0.9
PSEN1-224ENST00000559361 CIAO1O76071 339 aa20.69■□□□□ 0.9
PSEN1-224ENST00000559361 MYCP01106 439 aaPredicted RBP20.69■□□□□ 0.9
PSEN1-224ENST00000559361 RFX5P48382 616 aaPredicted RBP20.69■□□□□ 0.9
PSEN1-224ENST00000559361 KIF22Q14807 665 aa20.69■□□□□ 0.9
PSEN1-224ENST00000559361 HSP90AB4PQ58FF6 505 aa20.69■□□□□ 0.9
PSEN1-224ENST00000559361 C17orf99Q6UX52 265 aa20.69■□□□□ 0.9
PSEN1-224ENST00000559361 FBXO33Q7Z6M2 555 aa20.69■□□□□ 0.9
PSEN1-224ENST00000559361 SHISA4Q96DD7 197 aa20.69■□□□□ 0.9
PSEN1-224ENST00000559361 MRIQ9BWK5 157 aa20.69■□□□□ 0.9
PSEN1-224ENST00000559361 PPIL2Q13356 520 aa20.68■□□□□ 0.9
PSEN1-224ENST00000559361 SNAPC2Q13487 334 aa20.68■□□□□ 0.9
PSEN1-224ENST00000559361 HDAC1Q13547 482 aaPredicted RBP20.68■□□□□ 0.9
PSEN1-224ENST00000559361 FKBP1CQ5VVH2 108 aa20.68■□□□□ 0.9
PSEN1-224ENST00000559361 FAM83AQ86UY5 434 aa20.68■□□□□ 0.9
PSEN1-224ENST00000559361 PUS3Q9BZE2 481 aaKnown RBP20.68■□□□□ 0.9
PSEN1-224ENST00000559361 RIPOR2Q9Y4F9 1068 aa20.68■□□□□ 0.9
PSEN1-224ENST00000559361 PCDHB15Q9Y5E8 787 aa20.68■□□□□ 0.9
PSEN1-224ENST00000559361 CTGFP29279 349 aa20.67■□□□□ 0.9
PSEN1-224ENST00000559361 MTFR1Q15390 333 aa20.67■□□□□ 0.9
PSEN1-224ENST00000559361 UBE2Q1Q7Z7E8 422 aa20.67■□□□□ 0.9
PSEN1-224ENST00000559361 SIRT2Q8IXJ6 389 aa20.67■□□□□ 0.9
PSEN1-224ENST00000559361 ZKSCAN4Q969J2 545 aaPredicted RBP20.67■□□□□ 0.9
PSEN1-224ENST00000559361 NOP58Q9Y2X3 529 aaKnown RBP20.67■□□□□ 0.9
PSEN1-224ENST00000559361 CACNB3P54284 484 aa20.66■□□□□ 0.9
PSEN1-224ENST00000559361 TBC1D22AQ8WUA7 517 aa20.66■□□□□ 0.9
PSEN1-224ENST00000559361 ZDHHC15Q96MV8 337 aa20.66■□□□□ 0.9
PSEN1-224ENST00000559361 WRNIP1Q96S55 665 aa20.66■□□□□ 0.9
PSEN1-224ENST00000559361 RWDD1Q9H446 243 aaPredicted RBP20.66■□□□□ 0.9
PSEN1-224ENST00000559361 MROH5Q6ZUA9 1318 aa20.65■□□□□ 0.9
PSEN1-224ENST00000559361 EYA2O00167 538 aa20.65■□□□□ 0.9
PSEN1-224ENST00000559361 IL15P40933 162 aaPredicted RBP20.65■□□□□ 0.9
PSEN1-224ENST00000559361 APOBEC3HQ6NTF7 200 aaKnown RBP20.65■□□□□ 0.9
PSEN1-224ENST00000559361 CHRDL2Q6WN34 429 aa20.65■□□□□ 0.9
PSEN1-224ENST00000559361 TEKT1Q969V4 418 aa20.65■□□□□ 0.9
PSEN1-224ENST00000559361 PRO3102Q9H379 93 aa20.65■□□□□ 0.9
PSEN1-224ENST00000559361 RBM27Q9P2N5 1060 aaKnown RBP20.65■□□□□ 0.9
PSEN1-224ENST00000559361 SRRDQ9UH36 339 aa20.65■□□□□ 0.9
PSEN1-224ENST00000559361 ADGRA2Q96PE1 1338 aa20.64■□□□□ 0.89
PSEN1-224ENST00000559361 PPATQ06203 517 aa20.64■□□□□ 0.89
PSEN1-224ENST00000559361 ERC1Q8IUD2 1116 aa20.64■□□□□ 0.89
PSEN1-224ENST00000559361 HOOK2Q96ED9 719 aa20.64■□□□□ 0.89
PSEN1-224ENST00000559361 TRIM47Q96LD4 638 aa20.64■□□□□ 0.89
PSEN1-224ENST00000559361 CUL9Q8IWT3 2517 aa20.64■□□□□ 0.89
PSEN1-224ENST00000559361 RPAP1Q9BWH6 1393 aaPredicted RBP20.63■□□□□ 0.89
PSEN1-224ENST00000559361 G3BP1Q13283 466 aaKnown RBP eCLIP20.63■□□□□ 0.89
PSEN1-224ENST00000559361 ANKRD23Q86SG2 305 aa20.63■□□□□ 0.89
PSEN1-224ENST00000559361 NKX2-3Q8TAU0 364 aa20.63■□□□□ 0.89
PSEN1-224ENST00000559361 IQSEC3Q9UPP2 1182 aaPredicted RBP20.63■□□□□ 0.89
PSEN1-224ENST00000559361 A0A0C4DFX4 3053 aa20.62■□□□□ 0.89
PSEN1-224ENST00000559361 LAMA3Q16787 3333 aa20.62■□□□□ 0.89
PSEN1-224ENST00000559361 RAB11FIP3O75154 756 aa20.62■□□□□ 0.89
PSEN1-224ENST00000559361 SURF6O75683 361 aaKnown RBP20.62■□□□□ 0.89
PSEN1-224ENST00000559361 GJB1P08034 283 aa20.62■□□□□ 0.89
PSEN1-224ENST00000559361 PSMC4P43686 418 aa20.62■□□□□ 0.89
PSEN1-224ENST00000559361 GJA8P48165 433 aa20.62■□□□□ 0.89
PSEN1-224ENST00000559361 DPF3Q92784 378 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms