RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 SLURP2P0DP57 97 aa16.87■□□□□ 0.29
CASC4-208ENST00000559151 STRIP2Q9ULQ0 834 aa16.87■□□□□ 0.29
CASC4-208ENST00000559151 TRIM37O94972 964 aa16.86■□□□□ 0.29
CASC4-208ENST00000559151 BCRP11274 1271 aa16.86■□□□□ 0.29
CASC4-208ENST00000559151 CWF19L2Q2TBE0 894 aaKnown RBP16.86■□□□□ 0.29
CASC4-208ENST00000559151 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.86■□□□□ 0.29
CASC4-208ENST00000559151 CCDC81Q6ZN84 652 aa16.86■□□□□ 0.29
CASC4-208ENST00000559151 PPT2Q9UMR5 302 aa16.86■□□□□ 0.29
CASC4-208ENST00000559151 BPNT1O95861 308 aa16.85■□□□□ 0.29
CASC4-208ENST00000559151 AMPD1P23109 780 aa16.85■□□□□ 0.29
CASC4-208ENST00000559151 POU4F3Q15319 338 aa16.85■□□□□ 0.29
CASC4-208ENST00000559151 REC114Q7Z4M0 266 aa16.85■□□□□ 0.29
CASC4-208ENST00000559151 CPLX3Q8WVH0 158 aa16.85■□□□□ 0.29
CASC4-208ENST00000559151 CORO1BQ9BR76 489 aa16.85■□□□□ 0.29
CASC4-208ENST00000559151 CYP11A1P05108 521 aa16.84■□□□□ 0.29
CASC4-208ENST00000559151 MCM4P33991 863 aa16.84■□□□□ 0.29
CASC4-208ENST00000559151 ETFBP38117 255 aa16.84■□□□□ 0.29
CASC4-208ENST00000559151 KLHDC7BQ96G42 594 aa16.84■□□□□ 0.29
CASC4-208ENST00000559151 BRMS1Q9HCU9 246 aa16.84■□□□□ 0.29
CASC4-208ENST00000559151 PRDM6Q9NQX0 595 aa16.84■□□□□ 0.29
CASC4-208ENST00000559151 MAOBP27338 520 aa16.83■□□□□ 0.28
CASC4-208ENST00000559151 CCDC144BQ3MJ40 725 aa16.83■□□□□ 0.28
CASC4-208ENST00000559151 LCE2CQ5TA81 110 aa16.83■□□□□ 0.28
CASC4-208ENST00000559151 SCARA3Q6AZY7 606 aa16.83■□□□□ 0.28
CASC4-208ENST00000559151 LYPD4Q6UWN0 246 aa16.83■□□□□ 0.28
CASC4-208ENST00000559151 GPBAR1Q8TDU6 330 aa16.83■□□□□ 0.28
CASC4-208ENST00000559151 SRRTQ9BXP5 876 aaKnown RBP16.83■□□□□ 0.28
CASC4-208ENST00000559151 CACNA2D2Q9NY47 1150 aa16.83■□□□□ 0.28
CASC4-208ENST00000559151 CTSBP07858 339 aa16.82■□□□□ 0.28
CASC4-208ENST00000559151 COL9A3Q14050 684 aaPredicted RBP16.82■□□□□ 0.28
CASC4-208ENST00000559151 DIEXFQ68CQ4 756 aaKnown RBP16.82■□□□□ 0.28
CASC4-208ENST00000559151 DMRTC2Q8IXT2 367 aaPredicted RBP16.82■□□□□ 0.28
CASC4-208ENST00000559151 ANAPC16Q96DE5 110 aa16.82■□□□□ 0.28
CASC4-208ENST00000559151 CCDC86Q9H6F5 360 aaKnown RBP16.82■□□□□ 0.28
CASC4-208ENST00000559151 TM4SF5O14894 197 aa16.81■□□□□ 0.28
CASC4-208ENST00000559151 CELA2BP08218 269 aaPredicted RBP16.81■□□□□ 0.28
CASC4-208ENST00000559151 NID1P14543 1247 aa16.81■□□□□ 0.28
CASC4-208ENST00000559151 CDK8P49336 464 aa16.81■□□□□ 0.28
CASC4-208ENST00000559151 RPL6Q02878 288 aaKnown RBP16.81■□□□□ 0.28
CASC4-208ENST00000559151 SETDB1Q15047 1291 aa16.81■□□□□ 0.28
CASC4-208ENST00000559151 GALNT11Q8NCW6 608 aa16.81■□□□□ 0.28
CASC4-208ENST00000559151 SELPP16109 830 aa16.8■□□□□ 0.28
CASC4-208ENST00000559151 SOGA3Q5TF21 947 aa16.8■□□□□ 0.28
CASC4-208ENST00000559151 CKAP2LQ8IYA6 745 aa16.8■□□□□ 0.28
CASC4-208ENST00000559151 ACSBG1Q96GR2 724 aa16.8■□□□□ 0.28
CASC4-208ENST00000559151 LRRC4BQ9NT99 713 aa16.8■□□□□ 0.28
CASC4-208ENST00000559151 GMPRP36959 345 aa16.79■□□□□ 0.28
CASC4-208ENST00000559151 ZNF165P49910 485 aa16.79■□□□□ 0.28
CASC4-208ENST00000559151 NLRP12P59046 1061 aa16.79■□□□□ 0.28
CASC4-208ENST00000559151 GK5Q6ZS86 529 aa16.79■□□□□ 0.28
CASC4-208ENST00000559151 KLHL23Q8NBE8 558 aa16.79■□□□□ 0.28
CASC4-208ENST00000559151 SHDQ96IW2 340 aa16.79■□□□□ 0.28
CASC4-208ENST00000559151 PCDHA4Q9UN74 947 aa16.79■□□□□ 0.28
CASC4-208ENST00000559151 EIF4EBP3O60516 100 aaPredicted RBP16.78■□□□□ 0.28
CASC4-208ENST00000559151 SUZ12Q15022 739 aaKnown RBP16.78■□□□□ 0.28
CASC4-208ENST00000559151 ILDR2Q71H61 639 aa16.78■□□□□ 0.28
CASC4-208ENST00000559151 WHAMMQ8TF30 809 aa16.78■□□□□ 0.28
CASC4-208ENST00000559151 FERD3LQ96RJ6 166 aa16.78■□□□□ 0.28
CASC4-208ENST00000559151 USP26Q9BXU7 913 aa16.78■□□□□ 0.28
CASC4-208ENST00000559151 POLR3KQ9Y2Y1 108 aaPredicted RBP16.78■□□□□ 0.28
CASC4-208ENST00000559151 DDX3YO15523 660 aaKnown RBP16.77■□□□□ 0.28
CASC4-208ENST00000559151 CLCQ05315 142 aa16.77■□□□□ 0.28
CASC4-208ENST00000559151 OSBPL2Q9H1P3 480 aa16.77■□□□□ 0.28
CASC4-208ENST00000559151 KRT82Q9NSB4 513 aa16.77■□□□□ 0.28
CASC4-208ENST00000559151 ZNF862O60290 1169 aa16.76■□□□□ 0.27
CASC4-208ENST00000559151 PDE3AQ14432 1141 aa16.76■□□□□ 0.27
CASC4-208ENST00000559151 FBXW10Q5XX13 1052 aa16.76■□□□□ 0.27
CASC4-208ENST00000559151 ANKS3Q6ZW76 656 aa16.76■□□□□ 0.27
CASC4-208ENST00000559151 GRIN3BO60391 1043 aa16.75■□□□□ 0.27
CASC4-208ENST00000559151 ADAM11O75078 769 aa16.75■□□□□ 0.27
CASC4-208ENST00000559151 REXO1Q8N1G1 1221 aaKnown RBP16.75■□□□□ 0.27
CASC4-208ENST00000559151 PIF1Q9H611 641 aa16.75■□□□□ 0.27
CASC4-208ENST00000559151 ZSWIM4Q9H7M6 989 aa16.75■□□□□ 0.27
CASC4-208ENST00000559151 SMARCA5O60264 1052 aaPredicted RBP16.74■□□□□ 0.27
CASC4-208ENST00000559151 DEAF1O75398 565 aaPredicted RBP16.74■□□□□ 0.27
CASC4-208ENST00000559151 LIG1P18858 919 aa16.74■□□□□ 0.27
CASC4-208ENST00000559151 DGKGP49619 791 aa16.74■□□□□ 0.27
CASC4-208ENST00000559151 WIPI1Q5MNZ9 446 aaPredicted RBP16.74■□□□□ 0.27
CASC4-208ENST00000559151 GIMAP6Q6P9H5 292 aa16.74■□□□□ 0.27
CASC4-208ENST00000559151 HNRNPLLQ8WVV9 542 aaKnown RBP16.74■□□□□ 0.27
CASC4-208ENST00000559151 WDR89Q96FK6 387 aaPredicted RBP16.74■□□□□ 0.27
CASC4-208ENST00000559151 PCDHB14Q9Y5E9 798 aa16.74■□□□□ 0.27
CASC4-208ENST00000559151 EIF6P56537 245 aaKnown RBP16.73■□□□□ 0.27
CASC4-208ENST00000559151 INPP5AQ14642 412 aa16.73■□□□□ 0.27
CASC4-208ENST00000559151 FOXD4L6Q3SYB3 417 aaPredicted RBP16.73■□□□□ 0.27
CASC4-208ENST00000559151 FOXD4L3Q6VB84 417 aaPredicted RBP16.73■□□□□ 0.27
CASC4-208ENST00000559151 MAP4K3Q8IVH8 894 aa16.73■□□□□ 0.27
CASC4-208ENST00000559151 PRKAG3Q9UGI9 489 aa16.73■□□□□ 0.27
CASC4-208ENST00000559151 ZNRF3Q9ULT6 936 aa16.73■□□□□ 0.27
CASC4-208ENST00000559151 LOC100289279A0A1B0GTE1 492 aa16.72■□□□□ 0.27
CASC4-208ENST00000559151 HOXB4P17483 251 aaPredicted RBP16.72■□□□□ 0.27
CASC4-208ENST00000559151 LRFN4Q6PJG9 635 aa16.72■□□□□ 0.27
CASC4-208ENST00000559151 PLPPR2Q96GM1 343 aa16.72■□□□□ 0.27
CASC4-208ENST00000559151 KCNK4Q9NYG8 393 aa16.72■□□□□ 0.27
CASC4-208ENST00000559151 FAM169BQ8N8A8 192 aa16.71■□□□□ 0.27
CASC4-208ENST00000559151 GFRA2O00451 464 aa16.7■□□□□ 0.26
CASC4-208ENST00000559151 KLF4O43474 513 aa16.7■□□□□ 0.26
CASC4-208ENST00000559151 DLGAP3O95886 979 aa16.7■□□□□ 0.26
CASC4-208ENST00000559151 CD68P34810 354 aaPredicted RBP16.7■□□□□ 0.26
CASC4-208ENST00000559151 GIPRP48546 466 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms