RNA–Protein interactions for RNA: ENST00000558953.1

MARK3-216, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-216ENST00000558953 TAF1P21675 1872 aa7.93□□□□□ -1.14
MARK3-216ENST00000558953 COL4A5P29400 1685 aa7.92□□□□□ -1.14
MARK3-216ENST00000558953 KRTAP9-6A0A140TA67 174 aa7.92□□□□□ -1.14
MARK3-216ENST00000558953 TRIM66O15016 1216 aa7.92□□□□□ -1.14
MARK3-216ENST00000558953 LMOD1P29536 600 aaPredicted RBP7.92□□□□□ -1.14
MARK3-216ENST00000558953 MAP2K5Q13163 448 aa7.92□□□□□ -1.14
MARK3-216ENST00000558953 TRIM28Q13263 835 aaKnown RBP7.92□□□□□ -1.14
MARK3-216ENST00000558953 GRAPQ13588 217 aa7.92□□□□□ -1.14
MARK3-216ENST00000558953 DPP8Q6V1X1 898 aaPredicted RBP7.92□□□□□ -1.14
MARK3-216ENST00000558953 GRAPLQ8TC17 118 aaPredicted RBP7.92□□□□□ -1.14
MARK3-216ENST00000558953 CCDC102AQ96A19 550 aa7.92□□□□□ -1.14
MARK3-216ENST00000558953 ITPKCQ96DU7 683 aa7.92□□□□□ -1.14
MARK3-216ENST00000558953 RTFDC1Q9BY42 306 aaPredicted RBP7.92□□□□□ -1.14
MARK3-216ENST00000558953 PASKQ96RG2 1323 aa7.92□□□□□ -1.14
MARK3-216ENST00000558953 ATP5J2-PTCD1G3V325 749 aa7.91□□□□□ -1.14
MARK3-216ENST00000558953 ELL2O00472 640 aaPredicted RBP7.91□□□□□ -1.14
MARK3-216ENST00000558953 HSP90B1P14625 803 aaKnown RBP7.91□□□□□ -1.14
MARK3-216ENST00000558953 SF3B3Q15393 1217 aaKnown RBP7.91□□□□□ -1.14
MARK3-216ENST00000558953 AOC3Q16853 763 aa7.91□□□□□ -1.14
MARK3-216ENST00000558953 RIC3Q7Z5B4 369 aa7.91□□□□□ -1.14
MARK3-216ENST00000558953 SLC51AQ86UW1 340 aa7.91□□□□□ -1.14
MARK3-216ENST00000558953 LINC00528Q8N1L1 170 aa7.91□□□□□ -1.14
MARK3-216ENST00000558953 FAM89AQ96GI7 184 aa7.91□□□□□ -1.14
MARK3-216ENST00000558953 SPOCK3Q9BQ16 436 aa7.91□□□□□ -1.14
MARK3-216ENST00000558953 EVA1BQ9NVM1 165 aa7.91□□□□□ -1.14
MARK3-216ENST00000558953 ZNRF3Q9ULT6 936 aa7.91□□□□□ -1.14
MARK3-216ENST00000558953 LRRC37AA6NMS7 1700 aa7.91□□□□□ -1.14
MARK3-216ENST00000558953 LTBP1Q14766 1721 aa7.9□□□□□ -1.14
MARK3-216ENST00000558953 TMEM88BA6NKF7 163 aa7.9□□□□□ -1.14
MARK3-216ENST00000558953 IRF6O14896 467 aa7.9□□□□□ -1.14
MARK3-216ENST00000558953 SCNN1DP51172 638 aa7.9□□□□□ -1.14
MARK3-216ENST00000558953 KIAA2012Q0VF49 1180 aa7.9□□□□□ -1.14
MARK3-216ENST00000558953 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.9□□□□□ -1.14
MARK3-216ENST00000558953 CCDC30Q5VVM6 783 aa7.9□□□□□ -1.14
MARK3-216ENST00000558953 CNTROBQ8N137 903 aa7.9□□□□□ -1.14
MARK3-216ENST00000558953 KRI1Q8N9T8 703 aaKnown RBP7.9□□□□□ -1.14
MARK3-216ENST00000558953 C8orf58Q8NAV2 365 aa7.9□□□□□ -1.14
MARK3-216ENST00000558953 FAM174AQ8TBP5 190 aa7.9□□□□□ -1.14
MARK3-216ENST00000558953 PHAXQ9H814 394 aaKnown RBP7.9□□□□□ -1.14
MARK3-216ENST00000558953 MKRN1Q9UHC7 482 aaKnown RBP7.9□□□□□ -1.14
MARK3-216ENST00000558953 CDHR2Q9BYE9 1310 aa7.89□□□□□ -1.15
MARK3-216ENST00000558953 IRS4O14654 1257 aaPredicted RBP7.89□□□□□ -1.15
MARK3-216ENST00000558953 DDX58O95786 925 aaKnown RBP7.89□□□□□ -1.15
MARK3-216ENST00000558953 HSPA1AP0DMV8 641 aaKnown RBP7.89□□□□□ -1.15
MARK3-216ENST00000558953 HSPA1BP0DMV9 641 aaKnown RBP7.89□□□□□ -1.15
MARK3-216ENST00000558953 EPS15P42566 896 aa7.89□□□□□ -1.15
MARK3-216ENST00000558953 PTSQ03393 145 aa7.89□□□□□ -1.15
MARK3-216ENST00000558953 CXCL9Q07325 125 aa7.89□□□□□ -1.15
MARK3-216ENST00000558953 TNIP1Q15025 636 aa7.89□□□□□ -1.15
MARK3-216ENST00000558953 PTPRNQ16849 979 aa7.89□□□□□ -1.15
MARK3-216ENST00000558953 CCDC27Q2M243 656 aa7.89□□□□□ -1.15
MARK3-216ENST00000558953 PLA2G4EQ3MJ16 856 aa7.89□□□□□ -1.15
MARK3-216ENST00000558953 CCDC184Q52MB2 194 aa7.89□□□□□ -1.15
MARK3-216ENST00000558953 RTL5Q5HYW3 569 aaPredicted RBP7.89□□□□□ -1.15
MARK3-216ENST00000558953 MAP1SQ66K74 1059 aaPredicted RBP7.89□□□□□ -1.15
MARK3-216ENST00000558953 CIAPIN1Q6FI81 312 aa7.89□□□□□ -1.15
MARK3-216ENST00000558953 USP50Q70EL3 339 aaPredicted RBP7.89□□□□□ -1.15
MARK3-216ENST00000558953 ZBTB38Q8NAP3 1195 aaPredicted RBP7.89□□□□□ -1.15
MARK3-216ENST00000558953 CCDC191Q8NCU4 936 aa7.89□□□□□ -1.15
MARK3-216ENST00000558953 ZNF428Q96B54 188 aa7.89□□□□□ -1.15
MARK3-216ENST00000558953 CDK15Q96Q40 435 aa7.89□□□□□ -1.15
MARK3-216ENST00000558953 CACNA1FO60840 1977 aa7.89□□□□□ -1.15
MARK3-216ENST00000558953 TRPM7Q96QT4 1865 aa7.89□□□□□ -1.15
MARK3-216ENST00000558953 CNTNAP1P78357 1384 aa7.88□□□□□ -1.15
MARK3-216ENST00000558953 PCCAP05165 728 aaPredicted RBP7.88□□□□□ -1.15
MARK3-216ENST00000558953 RPS8P62241 208 aaKnown RBP7.88□□□□□ -1.15
MARK3-216ENST00000558953 KCNH2Q12809 1159 aa7.88□□□□□ -1.15
MARK3-216ENST00000558953 MEIOBQ8N635 442 aa7.88□□□□□ -1.15
MARK3-216ENST00000558953 CELF1Q92879 486 aaKnown RBP7.88□□□□□ -1.15
MARK3-216ENST00000558953 MYD88Q99836 296 aa7.88□□□□□ -1.15
MARK3-216ENST00000558953 METTL22Q9BUU2 404 aaPredicted RBP7.88□□□□□ -1.15
MARK3-216ENST00000558953 ADARB2Q9NS39 739 aaKnown RBP7.88□□□□□ -1.15
MARK3-216ENST00000558953 CWC25Q9NXE8 425 aaPredicted RBP7.88□□□□□ -1.15
MARK3-216ENST00000558953 GPRC5DQ9NZD1 345 aa7.88□□□□□ -1.15
MARK3-216ENST00000558953 NSFL1CQ9UNZ2 370 aaKnown RBP7.88□□□□□ -1.15
MARK3-216ENST00000558953 DUOX1Q9NRD9 1551 aa7.88□□□□□ -1.15
MARK3-216ENST00000558953 IL16Q14005 1332 aa7.87□□□□□ -1.15
MARK3-216ENST00000558953 ANP32CO43423 234 aa7.87□□□□□ -1.15
MARK3-216ENST00000558953 RAD17O75943 681 aa7.87□□□□□ -1.15
MARK3-216ENST00000558953 GMPSP49915 693 aaPredicted RBP7.87□□□□□ -1.15
MARK3-216ENST00000558953 PDE4DQ08499 809 aa7.87□□□□□ -1.15
MARK3-216ENST00000558953 NR5A1Q13285 461 aa7.87□□□□□ -1.15
MARK3-216ENST00000558953 ARID5BQ14865 1188 aa7.87□□□□□ -1.15
MARK3-216ENST00000558953 WASHC4Q2M389 1173 aa7.87□□□□□ -1.15
MARK3-216ENST00000558953 COL13A1Q5TAT6 717 aaPredicted RBP7.87□□□□□ -1.15
MARK3-216ENST00000558953 KSR2Q6VAB6 950 aa7.87□□□□□ -1.15
MARK3-216ENST00000558953 WWC1Q8IX03 1113 aa7.87□□□□□ -1.15
MARK3-216ENST00000558953 Q8N3U1 123 aa7.87□□□□□ -1.15
MARK3-216ENST00000558953 BCL2L13Q9BXK5 485 aa7.87□□□□□ -1.15
MARK3-216ENST00000558953 STK31Q9BXU1 1019 aa7.87□□□□□ -1.15
MARK3-216ENST00000558953 MRS2Q9HD23 443 aa7.87□□□□□ -1.15
MARK3-216ENST00000558953 MYH3P11055 1940 aa7.87□□□□□ -1.15
MARK3-216ENST00000558953 RASSF10A6NK89 507 aa7.86□□□□□ -1.15
MARK3-216ENST00000558953 C6orf229H3BNL8 230 aa7.86□□□□□ -1.15
MARK3-216ENST00000558953 PDE8AO60658 829 aa7.86□□□□□ -1.15
MARK3-216ENST00000558953 NR3C2P08235 984 aa7.86□□□□□ -1.15
MARK3-216ENST00000558953 GPSM2P81274 684 aa7.86□□□□□ -1.15
MARK3-216ENST00000558953 NEXNQ0ZGT2 675 aa7.86□□□□□ -1.15
MARK3-216ENST00000558953 DEFB115Q30KQ5 88 aa7.86□□□□□ -1.15
MARK3-216ENST00000558953 TWISTNBQ3B726 338 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms