RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 UBE2Q2LH0YL09 131 aa14.87□□□□□ -0.03
TPM1-216ENST00000558910 CIAO1O76071 339 aa14.87□□□□□ -0.03
TPM1-216ENST00000558910 EMP3P54852 163 aa14.87□□□□□ -0.03
TPM1-216ENST00000558910 TDRD3Q9H7E2 651 aaKnown RBP14.87□□□□□ -0.03
TPM1-216ENST00000558910 FAM205AQ6ZU69 1335 aa14.87□□□□□ -0.03
TPM1-216ENST00000558910 TCP10L2B9ZVM9 353 aa14.86□□□□□ -0.03
TPM1-216ENST00000558910 FOXN1O15353 648 aa14.86□□□□□ -0.03
TPM1-216ENST00000558910 MYO1BO43795 1136 aa14.86□□□□□ -0.03
TPM1-216ENST00000558910 ECE1P42892 770 aa14.86□□□□□ -0.03
TPM1-216ENST00000558910 CRKP46108 304 aa14.86□□□□□ -0.03
TPM1-216ENST00000558910 ZNF157P51786 506 aaPredicted RBP14.86□□□□□ -0.03
TPM1-216ENST00000558910 CACNB3P54284 484 aa14.86□□□□□ -0.03
TPM1-216ENST00000558910 GORABQ5T7V8 394 aa14.86□□□□□ -0.03
TPM1-216ENST00000558910 TMC2Q8TDI7 906 aa14.86□□□□□ -0.03
TPM1-216ENST00000558910 ZIC5Q96T25 663 aa14.86□□□□□ -0.03
TPM1-216ENST00000558910 ZNF646O15015 1829 aaPredicted RBP14.85□□□□□ -0.03
TPM1-216ENST00000558910 ZNF609O15014 1411 aa14.85□□□□□ -0.03
TPM1-216ENST00000558910 A0A1B0GUL7 405 aa14.85□□□□□ -0.03
TPM1-216ENST00000558910 APBB1O00213 710 aa14.85□□□□□ -0.03
TPM1-216ENST00000558910 ZBTB7BO15156 539 aaPredicted RBP14.85□□□□□ -0.03
TPM1-216ENST00000558910 SURF6O75683 361 aaKnown RBP14.85□□□□□ -0.03
TPM1-216ENST00000558910 APOBEC3FQ8IUX4 373 aaKnown RBP14.85□□□□□ -0.03
TPM1-216ENST00000558910 GNL3LQ9NVN8 582 aaKnown RBP14.85□□□□□ -0.03
TPM1-216ENST00000558910 NF2P35240 595 aa14.84□□□□□ -0.03
TPM1-216ENST00000558910 FKBP1AP62942 108 aaKnown RBP14.84□□□□□ -0.03
TPM1-216ENST00000558910 ATP8B2P98198 1209 aa14.84□□□□□ -0.03
TPM1-216ENST00000558910 COL13A1Q5TAT6 717 aaPredicted RBP14.84□□□□□ -0.03
TPM1-216ENST00000558910 C20orf194Q5TEA3 1177 aa14.84□□□□□ -0.03
TPM1-216ENST00000558910 RGMBQ6NW40 437 aa14.84□□□□□ -0.03
TPM1-216ENST00000558910 CDAN1Q8IWY9 1227 aa14.84□□□□□ -0.03
TPM1-216ENST00000558910 XAGE2Q96GT9 111 aa14.84□□□□□ -0.03
TPM1-216ENST00000558910 ZBED3Q96IU2 234 aaPredicted RBP14.84□□□□□ -0.03
TPM1-216ENST00000558910 DEFB129Q9H1M3 183 aa14.84□□□□□ -0.03
TPM1-216ENST00000558910 PITPNM2Q9BZ72 1349 aa14.84□□□□□ -0.03
TPM1-216ENST00000558910 HOXB1P14653 301 aaPredicted RBP14.83□□□□□ -0.04
TPM1-216ENST00000558910 MTX1Q13505 466 aa14.83□□□□□ -0.04
TPM1-216ENST00000558910 DIXDC1Q155Q3 683 aa14.83□□□□□ -0.04
TPM1-216ENST00000558910 CCDC102BQ68D86 513 aa14.83□□□□□ -0.04
TPM1-216ENST00000558910 TBC1D22AQ8WUA7 517 aa14.83□□□□□ -0.04
TPM1-216ENST00000558910 BEGAINQ9BUH8 593 aa14.83□□□□□ -0.04
TPM1-216ENST00000558910 ZNF70Q9UC06 446 aaPredicted RBP14.83□□□□□ -0.04
TPM1-216ENST00000558910 ABCF2Q9UG63 623 aa14.83□□□□□ -0.04
TPM1-216ENST00000558910 ANGEL1Q9UNK9 670 aaKnown RBP14.83□□□□□ -0.04
TPM1-216ENST00000558910 TEKT1Q969V4 418 aa14.82□□□□□ -0.04
TPM1-216ENST00000558910 PCDH10Q9P2E7 1040 aa14.82□□□□□ -0.04
TPM1-216ENST00000558910 AKAP2Q9Y2D5 859 aa14.82□□□□□ -0.04
TPM1-216ENST00000558910 COL1A1P02452 1464 aaPredicted RBP14.82□□□□□ -0.04
TPM1-216ENST00000558910 PRDX5P30044 214 aa14.81□□□□□ -0.04
TPM1-216ENST00000558910 LBX1P52954 281 aa14.81□□□□□ -0.04
TPM1-216ENST00000558910 RASA3Q14644 834 aa14.81□□□□□ -0.04
TPM1-216ENST00000558910 MVPQ14764 893 aaKnown RBP14.81□□□□□ -0.04
TPM1-216ENST00000558910 NBPF12Q5TAG4 269 aaPredicted RBP14.81□□□□□ -0.04
TPM1-216ENST00000558910 CEP85Q6P2H3 762 aa14.81□□□□□ -0.04
TPM1-216ENST00000558910 PI16Q6UXB8 463 aa14.81□□□□□ -0.04
TPM1-216ENST00000558910 WDR66Q8TBY9 1149 aa14.81□□□□□ -0.04
TPM1-216ENST00000558910 SNRKQ9NRH2 765 aa14.81□□□□□ -0.04
TPM1-216ENST00000558910 WBP1LQ9NX94 342 aa14.81□□□□□ -0.04
TPM1-216ENST00000558910 SERPINA10Q9UK55 444 aa14.81□□□□□ -0.04
TPM1-216ENST00000558910 EXOC6BQ9Y2D4 811 aa14.81□□□□□ -0.04
TPM1-216ENST00000558910 LDHBP07195 334 aaKnown RBP14.8□□□□□ -0.04
TPM1-216ENST00000558910 MS4A1P11836 297 aa14.8□□□□□ -0.04
TPM1-216ENST00000558910 KIF23Q02241 960 aaPredicted RBP14.8□□□□□ -0.04
TPM1-216ENST00000558910 MAP2K1Q02750 393 aaPredicted RBP14.8□□□□□ -0.04
TPM1-216ENST00000558910 RASGRF1Q13972 1273 aa14.8□□□□□ -0.04
TPM1-216ENST00000558910 MTMR14Q8NCE2 650 aa14.8□□□□□ -0.04
TPM1-216ENST00000558910 TMEM39BQ9GZU3 492 aa14.8□□□□□ -0.04
TPM1-216ENST00000558910 CCDC8Q9H0W5 538 aaPredicted RBP14.8□□□□□ -0.04
TPM1-216ENST00000558910 DENND2AQ9ULE3 1009 aa14.8□□□□□ -0.04
TPM1-216ENST00000558910 FAM205CA6NFA0 338 aa14.79□□□□□ -0.04
TPM1-216ENST00000558910 MMP14P50281 582 aa14.79□□□□□ -0.04
TPM1-216ENST00000558910 TBC1D9Q6ZT07 1266 aa14.79□□□□□ -0.04
TPM1-216ENST00000558910 ARMC9Q7Z3E5 817 aa14.79□□□□□ -0.04
TPM1-216ENST00000558910 SSH3Q8TE77 659 aa14.79□□□□□ -0.04
TPM1-216ENST00000558910 DBNDD2Q9BQY9 259 aa14.79□□□□□ -0.04
TPM1-216ENST00000558910 POTEB3A0JP26 581 aa14.78□□□□□ -0.04
TPM1-216ENST00000558910 CTCFP49711 727 aaPredicted RBP14.78□□□□□ -0.04
TPM1-216ENST00000558910 TCP10Q12799 353 aa14.78□□□□□ -0.04
TPM1-216ENST00000558910 TTC39AQ5SRH9 613 aa14.78□□□□□ -0.04
TPM1-216ENST00000558910 GPR153Q6NV75 609 aa14.78□□□□□ -0.04
TPM1-216ENST00000558910 POTEBQ6S5H4 581 aa14.78□□□□□ -0.04
TPM1-216ENST00000558910 DZIP1Q86YF9 867 aaKnown RBP14.78□□□□□ -0.04
TPM1-216ENST00000558910 RASAL3Q86YV0 1011 aa14.78□□□□□ -0.04
TPM1-216ENST00000558910 TMOD2Q9NZR1 351 aa14.78□□□□□ -0.04
TPM1-216ENST00000558910 MAST3O60307 1309 aa14.77□□□□□ -0.04
TPM1-216ENST00000558910 FAM155AB1AL88 458 aaPredicted RBP14.77□□□□□ -0.05
TPM1-216ENST00000558910 HSPA8P11142 646 aaKnown RBP14.77□□□□□ -0.05
TPM1-216ENST00000558910 NOGQ13253 232 aa14.77□□□□□ -0.05
TPM1-216ENST00000558910 TNNI3KQ59H18 835 aa14.77□□□□□ -0.05
TPM1-216ENST00000558910 APOBEC3HQ6NTF7 200 aaKnown RBP14.77□□□□□ -0.05
TPM1-216ENST00000558910 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.77□□□□□ -0.05
TPM1-216ENST00000558910 CCDC102AQ96A19 550 aa14.77□□□□□ -0.05
TPM1-216ENST00000558910 HHIPL1Q96JK4 782 aa14.77□□□□□ -0.05
TPM1-216ENST00000558910 CLMNQ96JQ2 1002 aa14.77□□□□□ -0.05
TPM1-216ENST00000558910 ZSWIM6Q9HCJ5 1215 aa14.77□□□□□ -0.05
TPM1-216ENST00000558910 IL1RAPL2Q9NP60 686 aa14.77□□□□□ -0.05
TPM1-216ENST00000558910 TLR7Q9NYK1 1049 aaKnown RBP14.77□□□□□ -0.05
TPM1-216ENST00000558910 RAI14Q9P0K7 980 aa14.77□□□□□ -0.05
TPM1-216ENST00000558910 DDX19BQ9UMR2 479 aa14.77□□□□□ -0.05
TPM1-216ENST00000558910 DAGLAQ9Y4D2 1042 aa14.77□□□□□ -0.05
TPM1-216ENST00000558910 FPGT-TNNI3KV9GXZ4 949 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms