RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 PDZRN3Q9UPQ7 1066 aa9.06□□□□□ -0.96
TRAF3-206ENST00000558880 PA2G4Q9UQ80 394 aaKnown RBP9.06□□□□□ -0.96
TRAF3-206ENST00000558880 WTIPA6NIX2 430 aaPredicted RBP9.05□□□□□ -0.96
TRAF3-206ENST00000558880 FOXN1O15353 648 aa9.05□□□□□ -0.96
TRAF3-206ENST00000558880 CTHP32929 405 aa9.05□□□□□ -0.96
TRAF3-206ENST00000558880 DESI1Q6ICB0 168 aa9.05□□□□□ -0.96
TRAF3-206ENST00000558880 LYPD8Q6UX82 237 aa9.05□□□□□ -0.96
TRAF3-206ENST00000558880 TRIM67Q6ZTA4 783 aa9.05□□□□□ -0.96
TRAF3-206ENST00000558880 ATG9AQ7Z3C6 839 aa9.05□□□□□ -0.96
TRAF3-206ENST00000558880 RPAP2Q8IXW5 612 aaPredicted RBP9.05□□□□□ -0.96
TRAF3-206ENST00000558880 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.05□□□□□ -0.96
TRAF3-206ENST00000558880 NOP58Q9Y2X3 529 aaKnown RBP9.05□□□□□ -0.96
TRAF3-206ENST00000558880 COL11A2P13942 1736 aaPredicted RBP9.05□□□□□ -0.96
TRAF3-206ENST00000558880 KIF13BQ9NQT8 1826 aa9.04□□□□□ -0.96
TRAF3-206ENST00000558880 ITGA6P23229 1130 aa9.04□□□□□ -0.96
TRAF3-206ENST00000558880 ST5P78524 1137 aa9.04□□□□□ -0.96
TRAF3-206ENST00000558880 HDAC1Q13547 482 aaPredicted RBP9.04□□□□□ -0.96
TRAF3-206ENST00000558880 LRRC24Q50LG9 513 aa9.04□□□□□ -0.96
TRAF3-206ENST00000558880 OLFM4Q6UX06 510 aa9.04□□□□□ -0.96
TRAF3-206ENST00000558880 PCMTD1Q96MG8 357 aaPredicted RBP9.04□□□□□ -0.96
TRAF3-206ENST00000558880 NLRP3Q96P20 1036 aa9.04□□□□□ -0.96
TRAF3-206ENST00000558880 COPRSQ9NQ92 184 aa9.04□□□□□ -0.96
TRAF3-206ENST00000558880 MAP10Q9P2G4 905 aa9.04□□□□□ -0.96
TRAF3-206ENST00000558880 RIPOR2Q9Y4F9 1068 aa9.04□□□□□ -0.96
TRAF3-206ENST00000558880 LAMB2P55268 1798 aa9.04□□□□□ -0.96
TRAF3-206ENST00000558880 IRS2Q9Y4H2 1338 aa9.04□□□□□ -0.96
TRAF3-206ENST00000558880 SRGAP3O43295 1099 aa9.03□□□□□ -0.96
TRAF3-206ENST00000558880 SASH1O94885 1247 aa9.03□□□□□ -0.96
TRAF3-206ENST00000558880 AAMPQ13685 434 aa9.03□□□□□ -0.96
TRAF3-206ENST00000558880 C2CD5Q86YS7 1000 aa9.03□□□□□ -0.96
TRAF3-206ENST00000558880 VGLL2Q8N8G2 317 aa9.03□□□□□ -0.96
TRAF3-206ENST00000558880 HELBQ8NG08 1087 aaPredicted RBP9.03□□□□□ -0.96
TRAF3-206ENST00000558880 CRAMP1Q96RY5 1269 aa9.03□□□□□ -0.96
TRAF3-206ENST00000558880 DCTPP1Q9H773 170 aa9.03□□□□□ -0.96
TRAF3-206ENST00000558880 EVA1BQ9NVM1 165 aa9.03□□□□□ -0.96
TRAF3-206ENST00000558880 BRCA1P38398 1863 aaKnown RBP9.02□□□□□ -0.96
TRAF3-206ENST00000558880 SNAP23O00161 211 aa9.02□□□□□ -0.97
TRAF3-206ENST00000558880 GTF2E1P29083 439 aaPredicted RBP9.02□□□□□ -0.97
TRAF3-206ENST00000558880 PDE6BP35913 854 aa9.02□□□□□ -0.97
TRAF3-206ENST00000558880 RASSF7Q02833 373 aa9.02□□□□□ -0.97
TRAF3-206ENST00000558880 CTDSPL2Q05D32 466 aa9.02□□□□□ -0.97
TRAF3-206ENST00000558880 KCNH2Q12809 1159 aa9.02□□□□□ -0.97
TRAF3-206ENST00000558880 GRAPQ13588 217 aa9.02□□□□□ -0.97
TRAF3-206ENST00000558880 LINC01559Q495D7 138 aa9.02□□□□□ -0.97
TRAF3-206ENST00000558880 CCDC152Q4G0S7 254 aa9.02□□□□□ -0.97
TRAF3-206ENST00000558880 STYK1Q6J9G0 422 aa9.02□□□□□ -0.97
TRAF3-206ENST00000558880 SMC5Q8IY18 1101 aa9.02□□□□□ -0.97
TRAF3-206ENST00000558880 GRAPLQ8TC17 118 aaPredicted RBP9.02□□□□□ -0.97
TRAF3-206ENST00000558880 AIDAQ96BJ3 306 aa9.02□□□□□ -0.97
TRAF3-206ENST00000558880 MASTLQ96GX5 879 aa9.02□□□□□ -0.97
TRAF3-206ENST00000558880 UNC93B1Q9H1C4 597 aa9.02□□□□□ -0.97
TRAF3-206ENST00000558880 PKD2L1Q9P0L9 805 aa9.02□□□□□ -0.97
TRAF3-206ENST00000558880 ARFGEF1Q9Y6D6 1849 aa9.01□□□□□ -0.97
TRAF3-206ENST00000558880 EYA2O00167 538 aa9.01□□□□□ -0.97
TRAF3-206ENST00000558880 GDF9O60383 454 aa9.01□□□□□ -0.97
TRAF3-206ENST00000558880 SBF1O95248 1867 aa9.01□□□□□ -0.97
TRAF3-206ENST00000558880 VEGFAP15692 232 aaPredicted RBP9.01□□□□□ -0.97
TRAF3-206ENST00000558880 NPR1P16066 1061 aa9.01□□□□□ -0.97
TRAF3-206ENST00000558880 RPS8P62241 208 aaKnown RBP9.01□□□□□ -0.97
TRAF3-206ENST00000558880 SKOR1P84550 965 aa9.01□□□□□ -0.97
TRAF3-206ENST00000558880 MLLT1Q03111 559 aaPredicted RBP9.01□□□□□ -0.97
TRAF3-206ENST00000558880 DALRD3Q5D0E6 543 aaKnown RBP9.01□□□□□ -0.97
TRAF3-206ENST00000558880 ERICH6BQ5W0A0 696 aa9.01□□□□□ -0.97
TRAF3-206ENST00000558880 ABHD8Q96I13 439 aa9.01□□□□□ -0.97
TRAF3-206ENST00000558880 PRDM10Q9NQV6 1147 aa9.01□□□□□ -0.97
TRAF3-206ENST00000558880 PIM2Q9P1W9 311 aa9.01□□□□□ -0.97
TRAF3-206ENST00000558880 MINPP1Q9UNW1 487 aa9.01□□□□□ -0.97
TRAF3-206ENST00000558880 ANKRD18BA2A2Z9 1011 aa9□□□□□ -0.97
TRAF3-206ENST00000558880 AP1G2O75843 785 aa9□□□□□ -0.97
TRAF3-206ENST00000558880 CIAO1O76071 339 aa9□□□□□ -0.97
TRAF3-206ENST00000558880 FGFR2P21802 821 aa9□□□□□ -0.97
TRAF3-206ENST00000558880 IFIT5Q13325 482 aaKnown RBP9□□□□□ -0.97
TRAF3-206ENST00000558880 B4GALNT3Q6L9W6 998 aa9□□□□□ -0.97
TRAF3-206ENST00000558880 PRPF40BQ6NWY9 871 aaKnown RBP9□□□□□ -0.97
TRAF3-206ENST00000558880 SKAP1Q86WV1 359 aa9□□□□□ -0.97
TRAF3-206ENST00000558880 BSDC1Q9NW68 430 aaPredicted RBP9□□□□□ -0.97
TRAF3-206ENST00000558880 EXOC6BQ9Y2D4 811 aa9□□□□□ -0.97
TRAF3-206ENST00000558880 DUOX1Q9NRD9 1551 aa8.99□□□□□ -0.97
TRAF3-206ENST00000558880 CCDC85CA6NKD9 419 aa8.99□□□□□ -0.97
TRAF3-206ENST00000558880 H0YIN7 160 aa8.99□□□□□ -0.97
TRAF3-206ENST00000558880 F12P00748 615 aaPredicted RBP8.99□□□□□ -0.97
TRAF3-206ENST00000558880 KLRK1P26718 216 aa8.99□□□□□ -0.97
TRAF3-206ENST00000558880 CTCFP49711 727 aaPredicted RBP8.99□□□□□ -0.97
TRAF3-206ENST00000558880 LBX1P52954 281 aa8.99□□□□□ -0.97
TRAF3-206ENST00000558880 CCDC57Q2TAC2 916 aa8.99□□□□□ -0.97
TRAF3-206ENST00000558880 PPP2R2DQ66LE6 453 aa8.99□□□□□ -0.97
TRAF3-206ENST00000558880 Q6ZNB5 142 aa8.99□□□□□ -0.97
TRAF3-206ENST00000558880 DDX46Q7L014 1031 aaKnown RBP8.99□□□□□ -0.97
TRAF3-206ENST00000558880 LRRN4Q8WUT4 740 aa8.99□□□□□ -0.97
TRAF3-206ENST00000558880 BAP1Q92560 729 aa8.99□□□□□ -0.97
TRAF3-206ENST00000558880 RBM17Q96I25 401 aaKnown RBP8.99□□□□□ -0.97
TRAF3-206ENST00000558880 SIL1Q9H173 461 aa8.99□□□□□ -0.97
TRAF3-206ENST00000558880 CHMP4BQ9H444 224 aaKnown RBP8.99□□□□□ -0.97
TRAF3-206ENST00000558880 GOPCQ9HD26 462 aa8.99□□□□□ -0.97
TRAF3-206ENST00000558880 CHMP3Q9Y3E7 222 aa8.99□□□□□ -0.97
TRAF3-206ENST00000558880 ATP6V0A2Q9Y487 856 aa8.99□□□□□ -0.97
TRAF3-206ENST00000558880 GTF3C3Q9Y5Q9 886 aa8.99□□□□□ -0.97
TRAF3-206ENST00000558880 SALL3Q9BXA9 1300 aa8.99□□□□□ -0.97
TRAF3-206ENST00000558880 TAF1P21675 1872 aa8.98□□□□□ -0.97
TRAF3-206ENST00000558880 LTBP1Q14766 1721 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms