RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 BEND4Q6ZU67 534 aa7.02□□□□□ -1.29
CASC4-206ENST00000558847 FAM20CQ8IXL6 584 aa7.02□□□□□ -1.29
CASC4-206ENST00000558847 C3orf58Q8NDZ4 430 aa7.02□□□□□ -1.29
CASC4-206ENST00000558847 RNF34Q969K3 372 aa7.02□□□□□ -1.29
CASC4-206ENST00000558847 FAM161BQ96MY7 647 aa7.02□□□□□ -1.29
CASC4-206ENST00000558847 RUSC1Q9BVN2 902 aa7.02□□□□□ -1.29
CASC4-206ENST00000558847 OSBPL7Q9BZF2 842 aa7.02□□□□□ -1.29
CASC4-206ENST00000558847 RNF208Q9H0X6 261 aa7.02□□□□□ -1.29
CASC4-206ENST00000558847 C12orf49Q9H741 205 aa7.02□□□□□ -1.29
CASC4-206ENST00000558847 FAM8A1Q9UBU6 413 aa7.02□□□□□ -1.29
CASC4-206ENST00000558847 COL17A1Q9UMD9 1497 aaPredicted RBP7.02□□□□□ -1.29
CASC4-206ENST00000558847 KIAA1324LA8MWY0 1029 aaPredicted RBP7.01□□□□□ -1.29
CASC4-206ENST00000558847 ERCC5P28715 1186 aaPredicted RBP7.01□□□□□ -1.29
CASC4-206ENST00000558847 ZNF76P36508 570 aa7.01□□□□□ -1.29
CASC4-206ENST00000558847 C19orf57Q0VDD7 668 aa7.01□□□□□ -1.29
CASC4-206ENST00000558847 FAAP100Q0VG06 881 aa7.01□□□□□ -1.29
CASC4-206ENST00000558847 NXPE4Q6UWF7 544 aa7.01□□□□□ -1.29
CASC4-206ENST00000558847 CLEC10AQ8IUN9 316 aa7.01□□□□□ -1.29
CASC4-206ENST00000558847 GOLGA2P5Q9HBQ8 144 aa7.01□□□□□ -1.29
CASC4-206ENST00000558847 RNF19AQ9NV58 838 aa7.01□□□□□ -1.29
CASC4-206ENST00000558847 OAS3Q9Y6K5 1087 aaKnown RBP7.01□□□□□ -1.29
CASC4-206ENST00000558847 TXKP42681 527 aa7□□□□□ -1.29
CASC4-206ENST00000558847 PREPP48147 710 aa7□□□□□ -1.29
CASC4-206ENST00000558847 FCGRTP55899 365 aa7□□□□□ -1.29
CASC4-206ENST00000558847 RPS26P11Q5JNZ5 115 aaPredicted RBP7□□□□□ -1.29
CASC4-206ENST00000558847 PPP1R3FQ6ZSY5 799 aaPredicted RBP7□□□□□ -1.29
CASC4-206ENST00000558847 SHKBP1Q8TBC3 707 aa7□□□□□ -1.29
CASC4-206ENST00000558847 FAM83CQ9BQN1 747 aa7□□□□□ -1.29
CASC4-206ENST00000558847 TRIM56Q9BRZ2 755 aaKnown RBP7□□□□□ -1.29
CASC4-206ENST00000558847 ZFYVE1Q9HBF4 777 aa7□□□□□ -1.29
CASC4-206ENST00000558847 TAL1P17542 331 aaPredicted RBP6.99□□□□□ -1.29
CASC4-206ENST00000558847 RXRBP28702 533 aa6.99□□□□□ -1.29
CASC4-206ENST00000558847 ST13P50502 369 aaKnown RBP6.99□□□□□ -1.29
CASC4-206ENST00000558847 WDR64B1ANS9 1081 aa6.98□□□□□ -1.29
CASC4-206ENST00000558847 XRCC5P13010 732 aaKnown RBP6.98□□□□□ -1.29
CASC4-206ENST00000558847 GSTT1P30711 240 aa6.98□□□□□ -1.29
CASC4-206ENST00000558847 HDLBPQ00341 1268 aaKnown RBP6.98□□□□□ -1.29
CASC4-206ENST00000558847 FANCCQ00597 558 aa6.98□□□□□ -1.29
CASC4-206ENST00000558847 NUTM2GQ5VZR2 741 aa6.98□□□□□ -1.29
CASC4-206ENST00000558847 DTHD1Q6ZMT9 781 aa6.98□□□□□ -1.29
CASC4-206ENST00000558847 GIMAP7Q8NHV1 300 aa6.98□□□□□ -1.29
CASC4-206ENST00000558847 MFSD14AQ96MC6 490 aa6.98□□□□□ -1.29
CASC4-206ENST00000558847 USP26Q9BXU7 913 aa6.98□□□□□ -1.29
CASC4-206ENST00000558847 LOC100289279A0A1B0GTE1 492 aa6.97□□□□□ -1.29
CASC4-206ENST00000558847 PRR19A6NJB7 356 aa6.97□□□□□ -1.29
CASC4-206ENST00000558847 BTBD11A6QL63 1104 aa6.97□□□□□ -1.29
CASC4-206ENST00000558847 WNT11O96014 354 aa6.97□□□□□ -1.29
CASC4-206ENST00000558847 SF3A1Q15459 793 aaKnown RBP6.97□□□□□ -1.29
CASC4-206ENST00000558847 LDLRAD1Q5T700 205 aa6.97□□□□□ -1.29
CASC4-206ENST00000558847 C12orf50Q8NA57 414 aaPredicted RBP6.97□□□□□ -1.29
CASC4-206ENST00000558847 TGIF2Q9GZN2 237 aa6.97□□□□□ -1.29
CASC4-206ENST00000558847 HIF3AQ9Y2N7 669 aa6.97□□□□□ -1.29
CASC4-206ENST00000558847 DLGAP3O95886 979 aa6.96□□□□□ -1.3
CASC4-206ENST00000558847 CTSBP07858 339 aa6.96□□□□□ -1.3
CASC4-206ENST00000558847 SPINK2P20155 84 aa6.96□□□□□ -1.3
CASC4-206ENST00000558847 MAP4P27816 1152 aaKnown RBP6.96□□□□□ -1.3
CASC4-206ENST00000558847 GSTM4Q03013 218 aa6.96□□□□□ -1.3
CASC4-206ENST00000558847 GNL2Q13823 731 aaKnown RBP6.96□□□□□ -1.3
CASC4-206ENST00000558847 TAF1CQ15572 869 aaPredicted RBP6.96□□□□□ -1.3
CASC4-206ENST00000558847 HS2ST1Q7LGA3 356 aa6.96□□□□□ -1.3
CASC4-206ENST00000558847 NT5DC4Q86YG4 428 aa6.96□□□□□ -1.3
CASC4-206ENST00000558847 FBXL6Q8N531 539 aa6.96□□□□□ -1.3
CASC4-206ENST00000558847 ANKRD24Q8TF21 1146 aa6.96□□□□□ -1.3
CASC4-206ENST00000558847 CCSER2Q9H7U1 834 aa6.96□□□□□ -1.3
CASC4-206ENST00000558847 ATG3Q9NT62 314 aa6.96□□□□□ -1.3
CASC4-206ENST00000558847 PPM1HQ9ULR3 514 aa6.96□□□□□ -1.3
CASC4-206ENST00000558847 USP31Q70CQ4 1352 aa6.95□□□□□ -1.3
CASC4-206ENST00000558847 ADAMTS4O75173 837 aa6.95□□□□□ -1.3
CASC4-206ENST00000558847 USP17L7P0C7H9 530 aa6.95□□□□□ -1.3
CASC4-206ENST00000558847 SGO2Q562F6 1265 aa6.95□□□□□ -1.3
CASC4-206ENST00000558847 DTX1Q86Y01 620 aa6.95□□□□□ -1.3
CASC4-206ENST00000558847 SREK1Q8WXA9 508 aaKnown RBP6.95□□□□□ -1.3
CASC4-206ENST00000558847 CYP4F12Q9HCS2 524 aa6.95□□□□□ -1.3
CASC4-206ENST00000558847 USP35Q9P2H5 1018 aa6.95□□□□□ -1.3
CASC4-206ENST00000558847 RNF114Q9Y508 228 aa6.95□□□□□ -1.3
CASC4-206ENST00000558847 ECEL1O95672 775 aa6.94□□□□□ -1.3
CASC4-206ENST00000558847 CTSHP09668 335 aa6.94□□□□□ -1.3
CASC4-206ENST00000558847 USP11P51784 963 aa6.94□□□□□ -1.3
CASC4-206ENST00000558847 METTL16Q86W50 562 aaKnown RBP6.94□□□□□ -1.3
CASC4-206ENST00000558847 TMPRSS13Q9BYE2 586 aa6.94□□□□□ -1.3
CASC4-206ENST00000558847 LEMD3Q9Y2U8 911 aa6.94□□□□□ -1.3
CASC4-206ENST00000558847 MEGF11A6BM72 1044 aa6.93□□□□□ -1.3
CASC4-206ENST00000558847 EIF4EBP3O60516 100 aaPredicted RBP6.93□□□□□ -1.3
CASC4-206ENST00000558847 RLBP1P12271 317 aa6.93□□□□□ -1.3
CASC4-206ENST00000558847 MAOBP27338 520 aa6.93□□□□□ -1.3
CASC4-206ENST00000558847 PWP1Q13610 501 aa6.93□□□□□ -1.3
CASC4-206ENST00000558847 NFKBIBQ15653 356 aa6.93□□□□□ -1.3
CASC4-206ENST00000558847 NAALADL2Q58DX5 795 aa6.93□□□□□ -1.3
CASC4-206ENST00000558847 KRTAP19-1Q8IUB9 90 aa6.93□□□□□ -1.3
CASC4-206ENST00000558847 ZNF654Q8IZM8 581 aa6.93□□□□□ -1.3
CASC4-206ENST00000558847 DRC1Q96MC2 740 aa6.93□□□□□ -1.3
CASC4-206ENST00000558847 NOC4LQ9BVI4 516 aaKnown RBP6.93□□□□□ -1.3
CASC4-206ENST00000558847 OSBPL1AQ9BXW6 950 aa6.93□□□□□ -1.3
CASC4-206ENST00000558847 PIM2Q9P1W9 311 aa6.93□□□□□ -1.3
CASC4-206ENST00000558847 GPN3Q9UHW5 284 aaPredicted RBP6.93□□□□□ -1.3
CASC4-206ENST00000558847 ANGEL1Q9UNK9 670 aaKnown RBP6.93□□□□□ -1.3
CASC4-206ENST00000558847 AKAP2Q9Y2D5 859 aa6.93□□□□□ -1.3
CASC4-206ENST00000558847 ENC1O14682 589 aa6.92□□□□□ -1.3
CASC4-206ENST00000558847 FBXO24O75426 580 aa6.92□□□□□ -1.3
CASC4-206ENST00000558847 HOXA10P31260 410 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms