RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 TRPM4Q8TD43 1214 aa7.25□□□□□ -1.25
LRRC28-208ENST00000558771 KLF16Q9BXK1 252 aaPredicted RBP7.25□□□□□ -1.25
LRRC28-208ENST00000558771 VPS33BQ9H267 617 aa7.25□□□□□ -1.25
LRRC28-208ENST00000558771 ATP13A2Q9NQ11 1180 aa7.25□□□□□ -1.25
LRRC28-208ENST00000558771 GMPR2Q9P2T1 348 aaKnown RBP7.25□□□□□ -1.25
LRRC28-208ENST00000558771 ZNRF3Q9ULT6 936 aa7.25□□□□□ -1.25
LRRC28-208ENST00000558771 LAMB4A4D0S4 1761 aa7.25□□□□□ -1.25
LRRC28-208ENST00000558771 MAP3K15Q6ZN16 1313 aa7.25□□□□□ -1.25
LRRC28-208ENST00000558771 SHTN1A0MZ66 631 aa7.24□□□□□ -1.25
LRRC28-208ENST00000558771 RAD17O75943 681 aa7.24□□□□□ -1.25
LRRC28-208ENST00000558771 NTSR2O95665 410 aa7.24□□□□□ -1.25
LRRC28-208ENST00000558771 TIMP2P16035 220 aa7.24□□□□□ -1.25
LRRC28-208ENST00000558771 WDR4P57081 412 aaKnown RBP7.24□□□□□ -1.25
LRRC28-208ENST00000558771 DLK2Q6UY11 383 aa7.24□□□□□ -1.25
LRRC28-208ENST00000558771 TTLL7Q6ZT98 887 aa7.24□□□□□ -1.25
LRRC28-208ENST00000558771 USP48Q86UV5 1035 aa7.24□□□□□ -1.25
LRRC28-208ENST00000558771 RTF1Q92541 710 aaKnown RBP7.24□□□□□ -1.25
LRRC28-208ENST00000558771 BCL2L13Q9BXK5 485 aa7.24□□□□□ -1.25
LRRC28-208ENST00000558771 RTFDC1Q9BY42 306 aaPredicted RBP7.24□□□□□ -1.25
LRRC28-208ENST00000558771 CDV3Q9UKY7 258 aaKnown RBP7.24□□□□□ -1.25
LRRC28-208ENST00000558771 ATP6V0A2Q9Y487 856 aa7.24□□□□□ -1.25
LRRC28-208ENST00000558771 CDHR2Q9BYE9 1310 aa7.24□□□□□ -1.25
LRRC28-208ENST00000558771 ZBBXA8MT70 800 aa7.23□□□□□ -1.25
LRRC28-208ENST00000558771 FAM155AB1AL88 458 aaPredicted RBP7.23□□□□□ -1.25
LRRC28-208ENST00000558771 APBB1O00213 710 aa7.23□□□□□ -1.25
LRRC28-208ENST00000558771 FSHRP23945 695 aa7.23□□□□□ -1.25
LRRC28-208ENST00000558771 TAF7Q15545 349 aaPredicted RBP7.23□□□□□ -1.25
LRRC28-208ENST00000558771 RGMBQ6NW40 437 aa7.23□□□□□ -1.25
LRRC28-208ENST00000558771 KIF6Q6ZMV9 814 aa7.23□□□□□ -1.25
LRRC28-208ENST00000558771 ZNF34Q8IZ26 560 aa7.23□□□□□ -1.25
LRRC28-208ENST00000558771 SUPT20HQ8NEM7 779 aa7.23□□□□□ -1.25
LRRC28-208ENST00000558771 SLC10A4Q96EP9 437 aa7.23□□□□□ -1.25
LRRC28-208ENST00000558771 KCTD15Q96SI1 283 aaPredicted RBP7.23□□□□□ -1.25
LRRC28-208ENST00000558771 TMX4Q9H1E5 349 aaPredicted RBP7.23□□□□□ -1.25
LRRC28-208ENST00000558771 SAGE1Q9NXZ1 904 aa7.23□□□□□ -1.25
LRRC28-208ENST00000558771 MIS18AQ9NYP9 233 aa7.23□□□□□ -1.25
LRRC28-208ENST00000558771 CNOT7Q9UIV1 285 aaKnown RBP7.23□□□□□ -1.25
LRRC28-208ENST00000558771 RRP7AQ9Y3A4 280 aaKnown RBP7.23□□□□□ -1.25
LRRC28-208ENST00000558771 ABCC4O15439 1325 aa7.23□□□□□ -1.25
LRRC28-208ENST00000558771 CLSPNQ9HAW4 1339 aa7.23□□□□□ -1.25
LRRC28-208ENST00000558771 YDJCA8MPS7 323 aa7.22□□□□□ -1.25
LRRC28-208ENST00000558771 H7C1D1 291 aa7.22□□□□□ -1.25
LRRC28-208ENST00000558771 TRPA1O75762 1119 aa7.22□□□□□ -1.25
LRRC28-208ENST00000558771 MYL6BP14649 208 aa7.22□□□□□ -1.25
LRRC28-208ENST00000558771 KIF23Q02241 960 aaPredicted RBP7.22□□□□□ -1.25
LRRC28-208ENST00000558771 KIAA2012Q0VF49 1180 aa7.22□□□□□ -1.25
LRRC28-208ENST00000558771 TNIP1Q15025 636 aa7.22□□□□□ -1.25
LRRC28-208ENST00000558771 DPP8Q6V1X1 898 aaPredicted RBP7.22□□□□□ -1.25
LRRC28-208ENST00000558771 NLRP3Q96P20 1036 aa7.22□□□□□ -1.25
LRRC28-208ENST00000558771 GBA2Q9HCG7 927 aaPredicted RBP7.22□□□□□ -1.25
LRRC28-208ENST00000558771 RNF186Q9NXI6 227 aa7.22□□□□□ -1.25
LRRC28-208ENST00000558771 NDUFB9Q9Y6M9 179 aa7.22□□□□□ -1.25
LRRC28-208ENST00000558771 AKAP11Q9UKA4 1901 aa7.22□□□□□ -1.25
LRRC28-208ENST00000558771 POLR2AP24928 1970 aaKnown RBP7.22□□□□□ -1.25
LRRC28-208ENST00000558771 KDM3BQ7LBC6 1761 aa7.21□□□□□ -1.25
LRRC28-208ENST00000558771 HTATSF1O43719 755 aaKnown RBP7.21□□□□□ -1.26
LRRC28-208ENST00000558771 ZIC2O95409 532 aaPredicted RBP7.21□□□□□ -1.26
LRRC28-208ENST00000558771 FBXO45P0C2W1 286 aa7.21□□□□□ -1.26
LRRC28-208ENST00000558771 U2AF1L5P0DN76 240 aaPredicted RBP7.21□□□□□ -1.26
LRRC28-208ENST00000558771 ZNF157P51786 506 aaPredicted RBP7.21□□□□□ -1.26
LRRC28-208ENST00000558771 U2AF1Q01081 240 aaKnown RBP eCLIP7.21□□□□□ -1.26
LRRC28-208ENST00000558771 TRIM26Q12899 539 aaPredicted RBP7.21□□□□□ -1.26
LRRC28-208ENST00000558771 KRT26Q7Z3Y9 468 aa7.21□□□□□ -1.26
LRRC28-208ENST00000558771 TRIM46Q7Z4K8 759 aa7.21□□□□□ -1.26
LRRC28-208ENST00000558771 PPP1R42Q7Z4L9 355 aa7.21□□□□□ -1.26
LRRC28-208ENST00000558771 CTU1Q7Z7A3 348 aaKnown RBP7.21□□□□□ -1.26
LRRC28-208ENST00000558771 SP8Q8IXZ3 490 aa7.21□□□□□ -1.26
LRRC28-208ENST00000558771 CCDC116Q8IYX3 515 aa7.21□□□□□ -1.26
LRRC28-208ENST00000558771 C2orf69Q8N8R5 385 aa7.21□□□□□ -1.26
LRRC28-208ENST00000558771 ITPKCQ96DU7 683 aa7.21□□□□□ -1.26
LRRC28-208ENST00000558771 LAMB2P55268 1798 aa7.2□□□□□ -1.26
LRRC28-208ENST00000558771 ADM5C9JUS6 153 aa7.2□□□□□ -1.26
LRRC28-208ENST00000558771 PSMD14O00487 310 aa7.2□□□□□ -1.26
LRRC28-208ENST00000558771 BBOX1O75936 387 aa7.2□□□□□ -1.26
LRRC28-208ENST00000558771 EGFRP00533 1210 aa7.2□□□□□ -1.26
LRRC28-208ENST00000558771 EIF4A1P60842 406 aaKnown RBP7.2□□□□□ -1.26
LRRC28-208ENST00000558771 TMEM132AQ24JP5 1023 aa7.2□□□□□ -1.26
LRRC28-208ENST00000558771 TBC1D10BQ4KMP7 808 aaPredicted RBP7.2□□□□□ -1.26
LRRC28-208ENST00000558771 PARP10Q53GL7 1025 aa7.2□□□□□ -1.26
LRRC28-208ENST00000558771 SLC10A5Q5PT55 438 aa7.2□□□□□ -1.26
LRRC28-208ENST00000558771 DPF2Q92785 391 aa7.2□□□□□ -1.26
LRRC28-208ENST00000558771 CFAP53Q96M91 514 aa7.2□□□□□ -1.26
LRRC28-208ENST00000558771 CSRNP1Q96S65 589 aa7.2□□□□□ -1.26
LRRC28-208ENST00000558771 UTP14AQ9BVJ6 771 aaKnown RBP7.2□□□□□ -1.26
LRRC28-208ENST00000558771 PCGF6Q9BYE7 350 aa7.2□□□□□ -1.26
LRRC28-208ENST00000558771 ZFAND3Q9H8U3 227 aa7.2□□□□□ -1.26
LRRC28-208ENST00000558771 SENP2Q9HC62 589 aa7.2□□□□□ -1.26
LRRC28-208ENST00000558771 NUDCQ9Y266 331 aa7.2□□□□□ -1.26
LRRC28-208ENST00000558771 MKI67P46013 3256 aaKnown RBP7.2□□□□□ -1.26
LRRC28-208ENST00000558771 DUOX1Q9NRD9 1551 aa7.2□□□□□ -1.26
LRRC28-208ENST00000558771 TAF1P21675 1872 aa7.19□□□□□ -1.26
LRRC28-208ENST00000558771 ANKRD36CQ5JPF3 1778 aa7.19□□□□□ -1.26
LRRC28-208ENST00000558771 GPR37L1O60883 481 aa7.19□□□□□ -1.26
LRRC28-208ENST00000558771 BMP1P13497 986 aa7.19□□□□□ -1.26
LRRC28-208ENST00000558771 HCLS1P14317 486 aaPredicted RBP7.19□□□□□ -1.26
LRRC28-208ENST00000558771 NR1H3Q13133 447 aa7.19□□□□□ -1.26
LRRC28-208ENST00000558771 GRAPQ13588 217 aa7.19□□□□□ -1.26
LRRC28-208ENST00000558771 GRAPLQ8TC17 118 aaPredicted RBP7.19□□□□□ -1.26
LRRC28-208ENST00000558771 THUMPD2Q9BTF0 503 aaKnown RBP7.19□□□□□ -1.26
LRRC28-208ENST00000558771 DBNDD1Q9H9R9 158 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms