RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 SLC5A1P13866 664 aa10.06□□□□□ -0.8
TRAF3-205ENST00000558700 IREB2P48200 963 aaKnown RBP10.06□□□□□ -0.8
TRAF3-205ENST00000558700 PTPN12Q05209 780 aaKnown RBP10.06□□□□□ -0.8
TRAF3-205ENST00000558700 CHAF1AQ13111 956 aaPredicted RBP10.06□□□□□ -0.8
TRAF3-205ENST00000558700 DSG2Q14126 1118 aa10.06□□□□□ -0.8
TRAF3-205ENST00000558700 LDLRAD1Q5T700 205 aa10.06□□□□□ -0.8
TRAF3-205ENST00000558700 SPRYD7Q5W111 196 aa10.06□□□□□ -0.8
TRAF3-205ENST00000558700 EMILIN3Q9NT22 766 aa10.06□□□□□ -0.8
TRAF3-205ENST00000558700 PCDHAC2Q9Y5I4 1007 aa10.06□□□□□ -0.8
TRAF3-205ENST00000558700 EYA2O00167 538 aa10.05□□□□□ -0.8
TRAF3-205ENST00000558700 ZBTB48P10074 688 aaPredicted RBP10.05□□□□□ -0.8
TRAF3-205ENST00000558700 CRKP46108 304 aa10.05□□□□□ -0.8
TRAF3-205ENST00000558700 TNNI2P48788 182 aa10.05□□□□□ -0.8
TRAF3-205ENST00000558700 HDLBPQ00341 1268 aaKnown RBP10.05□□□□□ -0.8
TRAF3-205ENST00000558700 FBXO33Q7Z6M2 555 aa10.05□□□□□ -0.8
TRAF3-205ENST00000558700 CTU1Q7Z7A3 348 aaKnown RBP10.05□□□□□ -0.8
TRAF3-205ENST00000558700 KLHDC4Q8TBB5 520 aa10.05□□□□□ -0.8
TRAF3-205ENST00000558700 PRMT6Q96LA8 375 aaPredicted RBP10.05□□□□□ -0.8
TRAF3-205ENST00000558700 ZNF70Q9UC06 446 aaPredicted RBP10.05□□□□□ -0.8
TRAF3-205ENST00000558700 IQSEC3Q9UPP2 1182 aaPredicted RBP10.05□□□□□ -0.8
TRAF3-205ENST00000558700 AOX1Q06278 1338 aa10.05□□□□□ -0.8
TRAF3-205ENST00000558700 RPAP1Q9BWH6 1393 aaPredicted RBP10.04□□□□□ -0.8
TRAF3-205ENST00000558700 MANSC4A6NHS7 340 aaPredicted RBP10.04□□□□□ -0.8
TRAF3-205ENST00000558700 CIAO1O76071 339 aa10.04□□□□□ -0.8
TRAF3-205ENST00000558700 ALDH1A1P00352 501 aa10.04□□□□□ -0.8
TRAF3-205ENST00000558700 FGFR2P21802 821 aa10.04□□□□□ -0.8
TRAF3-205ENST00000558700 TM4SF4P48230 202 aa10.04□□□□□ -0.8
TRAF3-205ENST00000558700 RFX5P48382 616 aaPredicted RBP10.04□□□□□ -0.8
TRAF3-205ENST00000558700 RASA3Q14644 834 aa10.04□□□□□ -0.8
TRAF3-205ENST00000558700 NOM1Q5C9Z4 860 aaKnown RBP10.04□□□□□ -0.8
TRAF3-205ENST00000558700 DZIP1LQ8IYY4 767 aaKnown RBP10.04□□□□□ -0.8
TRAF3-205ENST00000558700 LPIN2Q92539 896 aa10.04□□□□□ -0.8
TRAF3-205ENST00000558700 TEKT1Q969V4 418 aa10.04□□□□□ -0.8
TRAF3-205ENST00000558700 SLC10A4Q96EP9 437 aa10.04□□□□□ -0.8
TRAF3-205ENST00000558700 WNK4Q96J92 1243 aa10.04□□□□□ -0.8
TRAF3-205ENST00000558700 CFHR5Q9BXR6 569 aa10.04□□□□□ -0.8
TRAF3-205ENST00000558700 TMOD2Q9NZR1 351 aa10.04□□□□□ -0.8
TRAF3-205ENST00000558700 NOB1Q9ULX3 412 aaKnown RBP10.04□□□□□ -0.8
TRAF3-205ENST00000558700 TRPC6Q9Y210 931 aa10.04□□□□□ -0.8
TRAF3-205ENST00000558700 SUGT1Q9Y2Z0 365 aa10.04□□□□□ -0.8
TRAF3-205ENST00000558700 DOCK2Q92608 1830 aa10.03□□□□□ -0.8
TRAF3-205ENST00000558700 TTLL13PA6NNM8 815 aa10.03□□□□□ -0.8
TRAF3-205ENST00000558700 RARSP54136 660 aaKnown RBP10.03□□□□□ -0.8
TRAF3-205ENST00000558700 FOXK1P85037 733 aa10.03□□□□□ -0.8
TRAF3-205ENST00000558700 ATP2B3Q16720 1220 aa10.03□□□□□ -0.8
TRAF3-205ENST00000558700 NBPF12Q5TAG4 269 aaPredicted RBP10.03□□□□□ -0.8
TRAF3-205ENST00000558700 ANKRD13AQ8IZ07 590 aa10.03□□□□□ -0.8
TRAF3-205ENST00000558700 WDR66Q8TBY9 1149 aa10.03□□□□□ -0.8
TRAF3-205ENST00000558700 SIL1Q9H173 461 aa10.03□□□□□ -0.8
TRAF3-205ENST00000558700 TDRD3Q9H7E2 651 aaKnown RBP10.03□□□□□ -0.8
TRAF3-205ENST00000558700 FZD1Q9UP38 647 aa10.03□□□□□ -0.8
TRAF3-205ENST00000558700 LRRFIP2Q9Y608 721 aaKnown RBP10.03□□□□□ -0.8
TRAF3-205ENST00000558700 TCP10L2B9ZVM9 353 aa10.02□□□□□ -0.81
TRAF3-205ENST00000558700 TBC1D8O95759 1140 aa10.02□□□□□ -0.81
TRAF3-205ENST00000558700 GNAI3P08754 354 aa10.02□□□□□ -0.81
TRAF3-205ENST00000558700 BCAMP50895 628 aa10.02□□□□□ -0.81
TRAF3-205ENST00000558700 INHBEP58166 350 aa10.02□□□□□ -0.81
TRAF3-205ENST00000558700 ZNF296Q8WUU4 475 aaPredicted RBP10.02□□□□□ -0.81
TRAF3-205ENST00000558700 ARHGAP45Q92619 1136 aa10.02□□□□□ -0.81
TRAF3-205ENST00000558700 HOOK2Q96ED9 719 aa10.02□□□□□ -0.81
TRAF3-205ENST00000558700 DDRGK1Q96HY6 314 aa10.02□□□□□ -0.81
TRAF3-205ENST00000558700 CLMNQ96JQ2 1002 aa10.02□□□□□ -0.81
TRAF3-205ENST00000558700 ZDHHC15Q96MV8 337 aa10.02□□□□□ -0.81
TRAF3-205ENST00000558700 GNL3LQ9NVN8 582 aaKnown RBP10.02□□□□□ -0.81
TRAF3-205ENST00000558700 CEP126Q9P2H0 1117 aa10.02□□□□□ -0.81
TRAF3-205ENST00000558700 GPR25O00155 361 aa10.01□□□□□ -0.81
TRAF3-205ENST00000558700 IPO8O15397 1037 aaKnown RBP10.01□□□□□ -0.81
TRAF3-205ENST00000558700 IL15P40933 162 aaPredicted RBP10.01□□□□□ -0.81
TRAF3-205ENST00000558700 MAP3K9P80192 1104 aa10.01□□□□□ -0.81
TRAF3-205ENST00000558700 MLLT1Q03111 559 aaPredicted RBP10.01□□□□□ -0.81
TRAF3-205ENST00000558700 GRIK5Q16478 980 aa10.01□□□□□ -0.81
TRAF3-205ENST00000558700 PKN2Q16513 984 aaKnown RBP10.01□□□□□ -0.81
TRAF3-205ENST00000558700 ATG9AQ7Z3C6 839 aa10.01□□□□□ -0.81
TRAF3-205ENST00000558700 MEIS3Q99687 375 aa10.01□□□□□ -0.81
TRAF3-205ENST00000558700 TMEM39BQ9GZU3 492 aa10.01□□□□□ -0.81
TRAF3-205ENST00000558700 MAST2Q6P0Q8 1798 aa10.01□□□□□ -0.81
TRAF3-205ENST00000558700 GRXCR2A6NFK2 248 aa10□□□□□ -0.81
TRAF3-205ENST00000558700 FKTNO75072 461 aa10□□□□□ -0.81
TRAF3-205ENST00000558700 USP2O75604 605 aaPredicted RBP10□□□□□ -0.81
TRAF3-205ENST00000558700 RGS19P49795 217 aa10□□□□□ -0.81
TRAF3-205ENST00000558700 FKBP1CQ5VVH2 108 aa10□□□□□ -0.81
TRAF3-205ENST00000558700 INTS3Q68E01 1043 aaKnown RBP10□□□□□ -0.81
TRAF3-205ENST00000558700 OTUD7BQ6GQQ9 843 aa10□□□□□ -0.81
TRAF3-205ENST00000558700 HHIPL2Q6UWX4 724 aa10□□□□□ -0.81
TRAF3-205ENST00000558700 FAM83AQ86UY5 434 aa10□□□□□ -0.81
TRAF3-205ENST00000558700 TEPSINQ96N21 525 aa10□□□□□ -0.81
TRAF3-205ENST00000558700 MRIQ9BWK5 157 aa10□□□□□ -0.81
TRAF3-205ENST00000558700 COPRSQ9NQ92 184 aa10□□□□□ -0.81
TRAF3-205ENST00000558700 CSADQ9Y600 493 aa10□□□□□ -0.81
TRAF3-205ENST00000558700 SALL1Q9NSC2 1324 aa10□□□□□ -0.81
TRAF3-205ENST00000558700 AK9Q5TCS8 1911 aa9.99□□□□□ -0.81
TRAF3-205ENST00000558700 MYH2Q9UKX2 1941 aa9.99□□□□□ -0.81
TRAF3-205ENST00000558700 IGF2BP3O00425 579 aaKnown RBP eCLIP9.99□□□□□ -0.81
TRAF3-205ENST00000558700 LDHBP07195 334 aaKnown RBP9.99□□□□□ -0.81
TRAF3-205ENST00000558700 TRIM27P14373 513 aa9.99□□□□□ -0.81
TRAF3-205ENST00000558700 CACNB3P54284 484 aa9.99□□□□□ -0.81
TRAF3-205ENST00000558700 MAP2K5Q13163 448 aa9.99□□□□□ -0.81
TRAF3-205ENST00000558700 MTX1Q13505 466 aa9.99□□□□□ -0.81
TRAF3-205ENST00000558700 DCAF15Q66K64 600 aa9.99□□□□□ -0.81
TRAF3-205ENST00000558700 ATF7IPQ6VMQ6 1270 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms