RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 A0A0C4DFX4 3053 aa19.07■□□□□ 0.64
LINC01220-201ENST00000558575 ZBTB22O15209 634 aa19.06■□□□□ 0.64
LINC01220-201ENST00000558575 SMARCA5O60264 1052 aaPredicted RBP19.06■□□□□ 0.64
LINC01220-201ENST00000558575 GRIK5Q16478 980 aa19.06■□□□□ 0.64
LINC01220-201ENST00000558575 FBXW7Q969H0 707 aa19.06■□□□□ 0.64
LINC01220-201ENST00000558575 CENPBP07199 599 aaPredicted RBP19.05■□□□□ 0.64
LINC01220-201ENST00000558575 NF2P35240 595 aa19.05■□□□□ 0.64
LINC01220-201ENST00000558575 ERO1AQ96HE7 468 aa19.05■□□□□ 0.64
LINC01220-201ENST00000558575 COL1A1P02452 1464 aaPredicted RBP19.04■□□□□ 0.64
LINC01220-201ENST00000558575 SSC5DA1L4H1 1573 aa19.04■□□□□ 0.64
LINC01220-201ENST00000558575 WNT10BO00744 389 aa19.04■□□□□ 0.64
LINC01220-201ENST00000558575 FKBP1AP62942 108 aaKnown RBP19.04■□□□□ 0.64
LINC01220-201ENST00000558575 CHAF1AQ13111 956 aaPredicted RBP19.04■□□□□ 0.64
LINC01220-201ENST00000558575 ARMC9Q7Z3E5 817 aa19.04■□□□□ 0.64
LINC01220-201ENST00000558575 AACSQ86V21 672 aa19.04■□□□□ 0.64
LINC01220-201ENST00000558575 SLC17A8Q8NDX2 589 aa19.04■□□□□ 0.64
LINC01220-201ENST00000558575 ZNF333Q96JL9 665 aa19.04■□□□□ 0.64
LINC01220-201ENST00000558575 MANSC4A6NHS7 340 aaPredicted RBP19.03■□□□□ 0.64
LINC01220-201ENST00000558575 RASGRF1Q13972 1273 aa19.03■□□□□ 0.64
LINC01220-201ENST00000558575 CHRDL2Q6WN34 429 aa19.03■□□□□ 0.64
LINC01220-201ENST00000558575 LRRCC1Q9C099 1032 aa19.03■□□□□ 0.64
LINC01220-201ENST00000558575 GNL3LQ9NVN8 582 aaKnown RBP19.03■□□□□ 0.64
LINC01220-201ENST00000558575 ANGEL1Q9UNK9 670 aaKnown RBP19.03■□□□□ 0.64
LINC01220-201ENST00000558575 FRAT2O75474 233 aaPredicted RBP19.02■□□□□ 0.64
LINC01220-201ENST00000558575 ARID4AP29374 1257 aaPredicted RBP19.02■□□□□ 0.64
LINC01220-201ENST00000558575 CRHR2Q13324 411 aa19.02■□□□□ 0.64
LINC01220-201ENST00000558575 MFSD14BQ5SR56 506 aa19.02■□□□□ 0.64
LINC01220-201ENST00000558575 GORABQ5T7V8 394 aa19.02■□□□□ 0.64
LINC01220-201ENST00000558575 KIAA0825Q8IV33 1275 aa19.02■□□□□ 0.64
LINC01220-201ENST00000558575 CLASRPQ8N2M8 674 aaKnown RBP19.02■□□□□ 0.64
LINC01220-201ENST00000558575 EFCC1Q9HA90 598 aa19.02■□□□□ 0.64
LINC01220-201ENST00000558575 HMG20BQ9P0W2 317 aa19.02■□□□□ 0.64
LINC01220-201ENST00000558575 SEMA3EO15041 775 aa19.01■□□□□ 0.63
LINC01220-201ENST00000558575 INHBEP58166 350 aa19.01■□□□□ 0.63
LINC01220-201ENST00000558575 PI16Q6UXB8 463 aa19.01■□□□□ 0.63
LINC01220-201ENST00000558575 SMC5Q8IY18 1101 aa19.01■□□□□ 0.63
LINC01220-201ENST00000558575 CLMNQ96JQ2 1002 aa19.01■□□□□ 0.63
LINC01220-201ENST00000558575 ZNF512BQ96KM6 892 aaPredicted RBP19.01■□□□□ 0.63
LINC01220-201ENST00000558575 TMEM106CQ9BVX2 250 aa19.01■□□□□ 0.63
LINC01220-201ENST00000558575 BCL11AQ9H165 835 aa19.01■□□□□ 0.63
LINC01220-201ENST00000558575 RWDD1Q9H446 243 aaPredicted RBP19.01■□□□□ 0.63
LINC01220-201ENST00000558575 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.01■□□□□ 0.63
LINC01220-201ENST00000558575 RBM27Q9P2N5 1060 aaKnown RBP19.01■□□□□ 0.63
LINC01220-201ENST00000558575 DENND2AQ9ULE3 1009 aa19.01■□□□□ 0.63
LINC01220-201ENST00000558575 MYO3BQ8WXR4 1341 aa19■□□□□ 0.63
LINC01220-201ENST00000558575 MCAMP43121 646 aa19■□□□□ 0.63
LINC01220-201ENST00000558575 WNK4Q96J92 1243 aa19■□□□□ 0.63
LINC01220-201ENST00000558575 ARAP2Q8WZ64 1704 aa19■□□□□ 0.63
LINC01220-201ENST00000558575 F8W031 263 aaPredicted RBP18.99■□□□□ 0.63
LINC01220-201ENST00000558575 UQCRFS1P1P0C7P4 283 aa18.99■□□□□ 0.63
LINC01220-201ENST00000558575 CCDC158Q5M9N0 1113 aa18.99■□□□□ 0.63
LINC01220-201ENST00000558575 WDR66Q8TBY9 1149 aa18.99■□□□□ 0.63
LINC01220-201ENST00000558575 ZBTB48P10074 688 aaPredicted RBP18.98■□□□□ 0.63
LINC01220-201ENST00000558575 TTC39AQ5SRH9 613 aa18.98■□□□□ 0.63
LINC01220-201ENST00000558575 SPATA5Q8NB90 893 aa18.98■□□□□ 0.63
LINC01220-201ENST00000558575 TBC1D22AQ8WUA7 517 aa18.98■□□□□ 0.63
LINC01220-201ENST00000558575 SLC10A4Q96EP9 437 aa18.98■□□□□ 0.63
LINC01220-201ENST00000558575 SNRKQ9NRH2 765 aa18.98■□□□□ 0.63
LINC01220-201ENST00000558575 PCDHAC2Q9Y5I4 1007 aa18.98■□□□□ 0.63
LINC01220-201ENST00000558575 PTCH2Q9Y6C5 1203 aa18.98■□□□□ 0.63
LINC01220-201ENST00000558575 PDS5AQ29RF7 1337 aaKnown RBP18.98■□□□□ 0.63
LINC01220-201ENST00000558575 SALL1Q9NSC2 1324 aa18.98■□□□□ 0.63
LINC01220-201ENST00000558575 IFIT2P09913 472 aaKnown RBP18.97■□□□□ 0.63
LINC01220-201ENST00000558575 GJA5P36382 358 aa18.97■□□□□ 0.63
LINC01220-201ENST00000558575 SP3Q02447 781 aa18.97■□□□□ 0.63
LINC01220-201ENST00000558575 ANKRD45Q5TZF3 282 aa18.97■□□□□ 0.63
LINC01220-201ENST00000558575 OTUD7AQ8TE49 926 aaPredicted RBP18.97■□□□□ 0.63
LINC01220-201ENST00000558575 ZBED3Q96IU2 234 aaPredicted RBP18.97■□□□□ 0.63
LINC01220-201ENST00000558575 MYCP01106 439 aaPredicted RBP18.96■□□□□ 0.63
LINC01220-201ENST00000558575 MAP3K11Q16584 847 aa18.96■□□□□ 0.63
LINC01220-201ENST00000558575 TBC1D9Q6ZT07 1266 aa18.96■□□□□ 0.63
LINC01220-201ENST00000558575 APOBEC3FQ8IUX4 373 aaKnown RBP18.96■□□□□ 0.63
LINC01220-201ENST00000558575 PTPN18Q99952 460 aa18.96■□□□□ 0.63
LINC01220-201ENST00000558575 TTF2Q9UNY4 1162 aaKnown RBP18.96■□□□□ 0.63
LINC01220-201ENST00000558575 PRDX5P30044 214 aa18.95■□□□□ 0.62
LINC01220-201ENST00000558575 ZAP70P43403 619 aa18.95■□□□□ 0.62
LINC01220-201ENST00000558575 SLC4A8Q2Y0W8 1093 aa18.95■□□□□ 0.62
LINC01220-201ENST00000558575 SLC9C1Q4G0N8 1177 aa18.95■□□□□ 0.62
LINC01220-201ENST00000558575 OGFOD1Q8N543 542 aa18.95■□□□□ 0.62
LINC01220-201ENST00000558575 SUGT1Q9Y2Z0 365 aa18.95■□□□□ 0.62
LINC01220-201ENST00000558575 NDUFB9Q9Y6M9 179 aa18.95■□□□□ 0.62
LINC01220-201ENST00000558575 AOX1Q06278 1338 aa18.95■□□□□ 0.62
LINC01220-201ENST00000558575 CYP2E1P05181 493 aaPredicted RBP18.94■□□□□ 0.62
LINC01220-201ENST00000558575 MMP14P50281 582 aa18.94■□□□□ 0.62
LINC01220-201ENST00000558575 B4GALNT3Q6L9W6 998 aa18.94■□□□□ 0.62
LINC01220-201ENST00000558575 MTMR14Q8NCE2 650 aa18.94■□□□□ 0.62
LINC01220-201ENST00000558575 ZNF384Q8TF68 577 aa18.94■□□□□ 0.62
LINC01220-201ENST00000558575 PRO3102Q9H379 93 aa18.94■□□□□ 0.62
LINC01220-201ENST00000558575 ATP5JP18859 108 aa18.93■□□□□ 0.62
LINC01220-201ENST00000558575 CFAP100Q494V2 611 aa18.93■□□□□ 0.62
LINC01220-201ENST00000558575 PRMT6Q96LA8 375 aaPredicted RBP18.93■□□□□ 0.62
LINC01220-201ENST00000558575 MRIQ9BWK5 157 aa18.93■□□□□ 0.62
LINC01220-201ENST00000558575 ALPK3Q96L96 1907 aa18.93■□□□□ 0.62
LINC01220-201ENST00000558575 SALL3Q9BXA9 1300 aa18.93■□□□□ 0.62
LINC01220-201ENST00000558575 LAMA3Q16787 3333 aa18.93■□□□□ 0.62
LINC01220-201ENST00000558575 NUCB1Q02818 461 aa18.92■□□□□ 0.62
LINC01220-201ENST00000558575 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.92■□□□□ 0.62
LINC01220-201ENST00000558575 DEFB129Q9H1M3 183 aa18.92■□□□□ 0.62
LINC01220-201ENST00000558575 ANTXR1Q9H6X2 564 aa18.92■□□□□ 0.62
LINC01220-201ENST00000558575 PIH1D3Q9NQM4 214 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms