RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 ZSWIM8A7E2V4 1837 aa16.55■□□□□ 0.24
TMED3-205ENST00000558562 ECM2O94769 699 aaPredicted RBP16.55■□□□□ 0.24
TMED3-205ENST00000558562 C15orf52Q6ZUT6 534 aaKnown RBP16.55■□□□□ 0.24
TMED3-205ENST00000558562 FAM43AQ8N2R8 423 aa16.55■□□□□ 0.24
TMED3-205ENST00000558562 ARHGAP39Q9C0H5 1083 aa16.55■□□□□ 0.24
TMED3-205ENST00000558562 TDRD3Q9H7E2 651 aaKnown RBP16.55■□□□□ 0.24
TMED3-205ENST00000558562 ZNF70Q9UC06 446 aaPredicted RBP16.55■□□□□ 0.24
TMED3-205ENST00000558562 CHMP3Q9Y3E7 222 aa16.55■□□□□ 0.24
TMED3-205ENST00000558562 RANBP2P49792 3224 aaKnown RBP16.55■□□□□ 0.24
TMED3-205ENST00000558562 A0A1B0GUL6 1792 aa16.54■□□□□ 0.24
TMED3-205ENST00000558562 PNMA6EA0A0J9YXQ4 647 aa16.54■□□□□ 0.24
TMED3-205ENST00000558562 FKBP1AP62942 108 aaKnown RBP16.54■□□□□ 0.24
TMED3-205ENST00000558562 VGLL4Q14135 290 aa16.54■□□□□ 0.24
TMED3-205ENST00000558562 ARHGEF6Q15052 776 aa16.54■□□□□ 0.24
TMED3-205ENST00000558562 SPDYE2Q495Y8 402 aa16.54■□□□□ 0.24
TMED3-205ENST00000558562 C8orf34Q49A92 452 aa16.54■□□□□ 0.24
TMED3-205ENST00000558562 OTUD5Q96G74 571 aa16.54■□□□□ 0.24
TMED3-205ENST00000558562 TEPSINQ96N21 525 aa16.54■□□□□ 0.24
TMED3-205ENST00000558562 TMEM39BQ9GZU3 492 aa16.54■□□□□ 0.24
TMED3-205ENST00000558562 TCP10L2B9ZVM9 353 aa16.53■□□□□ 0.24
TMED3-205ENST00000558562 GTF2A2P52657 109 aa16.53■□□□□ 0.24
TMED3-205ENST00000558562 IFIT5Q13325 482 aaKnown RBP16.53■□□□□ 0.24
TMED3-205ENST00000558562 TNFAIP1Q13829 316 aa16.53■□□□□ 0.24
TMED3-205ENST00000558562 CHRDL2Q6WN34 429 aa16.53■□□□□ 0.24
TMED3-205ENST00000558562 TTF2Q9UNY4 1162 aaKnown RBP16.53■□□□□ 0.24
TMED3-205ENST00000558562 MAP3K9P80192 1104 aa16.52■□□□□ 0.24
TMED3-205ENST00000558562 FOXO4P98177 505 aa16.52■□□□□ 0.24
TMED3-205ENST00000558562 POLA2Q14181 598 aa16.52■□□□□ 0.24
TMED3-205ENST00000558562 MFSD14BQ5SR56 506 aa16.52■□□□□ 0.24
TMED3-205ENST00000558562 SSH3Q8TE77 659 aa16.52■□□□□ 0.24
TMED3-205ENST00000558562 SUCLG2Q96I99 432 aa16.52■□□□□ 0.24
TMED3-205ENST00000558562 ZNF594Q96JF6 807 aaPredicted RBP16.52■□□□□ 0.24
TMED3-205ENST00000558562 MTX1Q13505 466 aa16.51■□□□□ 0.23
TMED3-205ENST00000558562 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.51■□□□□ 0.237e-11■■■■■ 36.1
TMED3-205ENST00000558562 EXOC6BQ9Y2D4 811 aa16.51■□□□□ 0.23
TMED3-205ENST00000558562 CSADQ9Y600 493 aa16.51■□□□□ 0.23
TMED3-205ENST00000558562 APBB1O00213 710 aa16.5■□□□□ 0.23
TMED3-205ENST00000558562 SRGAP3O43295 1099 aa16.5■□□□□ 0.23
TMED3-205ENST00000558562 LACTBP83111 547 aaPredicted RBP16.5■□□□□ 0.23
TMED3-205ENST00000558562 DPF3Q92784 378 aa16.5■□□□□ 0.23
TMED3-205ENST00000558562 RBM27Q9P2N5 1060 aaKnown RBP16.5■□□□□ 0.23
TMED3-205ENST00000558562 SERPINA10Q9UK55 444 aa16.5■□□□□ 0.23
TMED3-205ENST00000558562 FAM205AQ6ZU69 1335 aa16.49■□□□□ 0.23
TMED3-205ENST00000558562 SMARCA5O60264 1052 aaPredicted RBP16.49■□□□□ 0.23
TMED3-205ENST00000558562 TLR2O60603 784 aa16.49■□□□□ 0.23
TMED3-205ENST00000558562 GYG1P46976 350 aa16.49■□□□□ 0.23
TMED3-205ENST00000558562 CACNB3P54284 484 aa16.49■□□□□ 0.23
TMED3-205ENST00000558562 KIF22Q14807 665 aa16.49■□□□□ 0.23
TMED3-205ENST00000558562 MTFR1Q15390 333 aa16.49■□□□□ 0.23
TMED3-205ENST00000558562 LMBR1LQ6UX01 489 aa16.49■□□□□ 0.23
TMED3-205ENST00000558562 CNNM1Q9NRU3 951 aa16.49■□□□□ 0.23
TMED3-205ENST00000558562 BTBD19C9JJ37 291 aa16.48■□□□□ 0.23
TMED3-205ENST00000558562 CRKP46108 304 aa16.48■□□□□ 0.23
TMED3-205ENST00000558562 GRIK5Q16478 980 aa16.48■□□□□ 0.23
TMED3-205ENST00000558562 TAF7LQ5H9L4 462 aa16.48■□□□□ 0.23
TMED3-205ENST00000558562 EPHA10Q5JZY3 1008 aa16.48■□□□□ 0.23
TMED3-205ENST00000558562 LDHAL6AQ6ZMR3 332 aa16.48■□□□□ 0.23
TMED3-205ENST00000558562 TDRD7Q8NHU6 1098 aaKnown RBP16.48■□□□□ 0.23
TMED3-205ENST00000558562 SHISA4Q96DD7 197 aa16.48■□□□□ 0.23
TMED3-205ENST00000558562 BICC1Q9H694 974 aaKnown RBP16.48■□□□□ 0.23
TMED3-205ENST00000558562 ARAP2Q8WZ64 1704 aa16.48■□□□□ 0.23
TMED3-205ENST00000558562 SPDYE5A6NIY4 337 aa16.47■□□□□ 0.23
TMED3-205ENST00000558562 RAB11FIP3O75154 756 aa16.47■□□□□ 0.23
TMED3-205ENST00000558562 WDHD1O75717 1129 aaPredicted RBP16.47■□□□□ 0.23
TMED3-205ENST00000558562 CETPP11597 493 aa16.47■□□□□ 0.23
TMED3-205ENST00000558562 TNNI2P48788 182 aa16.47■□□□□ 0.23
TMED3-205ENST00000558562 CCDC57Q2TAC2 916 aa16.47■□□□□ 0.23
TMED3-205ENST00000558562 ZKSCAN4Q969J2 545 aaPredicted RBP16.47■□□□□ 0.23
TMED3-205ENST00000558562 LRRCC1Q9C099 1032 aa16.47■□□□□ 0.23
TMED3-205ENST00000558562 SNCAIPQ9Y6H5 919 aa16.47■□□□□ 0.23
TMED3-205ENST00000558562 IRF6O14896 467 aa16.46■□□□□ 0.23
TMED3-205ENST00000558562 SURF6O75683 361 aaKnown RBP16.46■□□□□ 0.23
TMED3-205ENST00000558562 CTGFP29279 349 aa16.46■□□□□ 0.23
TMED3-205ENST00000558562 HIBADHP31937 336 aaKnown RBP16.46■□□□□ 0.23
TMED3-205ENST00000558562 HSP90AB4PQ58FF6 505 aa16.46■□□□□ 0.23
TMED3-205ENST00000558562 PLEKHM2Q8IWE5 1019 aa16.46■□□□□ 0.23
TMED3-205ENST00000558562 KAZALD1Q96I82 304 aa16.46■□□□□ 0.23
TMED3-205ENST00000558562 FAM84BQ96KN1 310 aaPredicted RBP16.46■□□□□ 0.23
TMED3-205ENST00000558562 WRNIP1Q96S55 665 aa16.46■□□□□ 0.23
TMED3-205ENST00000558562 BCL11AQ9H165 835 aa16.46■□□□□ 0.23
TMED3-205ENST00000558562 IQSEC3Q9UPP2 1182 aaPredicted RBP16.46■□□□□ 0.23
TMED3-205ENST00000558562 SNAPC2Q13487 334 aa16.45■□□□□ 0.22
TMED3-205ENST00000558562 BMP2KLQ5H9B9 411 aa16.45■□□□□ 0.22
TMED3-205ENST00000558562 ERO1BQ86YB8 467 aa16.45■□□□□ 0.22
TMED3-205ENST00000558562 CPA4Q9UI42 421 aa16.45■□□□□ 0.22
TMED3-205ENST00000558562 PSMC4P43686 418 aa16.44■□□□□ 0.22
TMED3-205ENST00000558562 CHAF1AQ13111 956 aaPredicted RBP16.44■□□□□ 0.22
TMED3-205ENST00000558562 TRIM47Q96LD4 638 aa16.44■□□□□ 0.22
TMED3-205ENST00000558562 PUS3Q9BZE2 481 aaKnown RBP16.44■□□□□ 0.22
TMED3-205ENST00000558562 GNRH1P01148 92 aa16.43■□□□□ 0.22
TMED3-205ENST00000558562 ANP32AP39687 249 aaKnown RBP16.43■□□□□ 0.22
TMED3-205ENST00000558562 OS9Q13438 667 aaPredicted RBP16.43■□□□□ 0.22
TMED3-205ENST00000558562 UBE4AQ14139 1066 aa16.43■□□□□ 0.22
TMED3-205ENST00000558562 C17orf99Q6UX52 265 aa16.43■□□□□ 0.22
TMED3-205ENST00000558562 OTUD7AQ8TE49 926 aaPredicted RBP16.43■□□□□ 0.22
TMED3-205ENST00000558562 KIF1BPQ96EK5 621 aa16.43■□□□□ 0.22
TMED3-205ENST00000558562 SRRDQ9UH36 339 aa16.43■□□□□ 0.22
TMED3-205ENST00000558562 NOP58Q9Y2X3 529 aaKnown RBP16.43■□□□□ 0.22
TMED3-205ENST00000558562 DLL1O00548 723 aa16.42■□□□□ 0.22
TMED3-205ENST00000558562 FMNL1O95466 1100 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms