RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 DEFB123Q8N688 67 aa8.66□□□□□ -1.02
LRRC28-207ENST00000558500 KIF12Q96FN5 646 aa8.66□□□□□ -1.02
LRRC28-207ENST00000558500 COL25A1Q9BXS0 654 aaPredicted RBP8.66□□□□□ -1.02
LRRC28-207ENST00000558500 UNC93B1Q9H1C4 597 aa8.66□□□□□ -1.02
LRRC28-207ENST00000558500 TTF2Q9UNY4 1162 aaKnown RBP8.66□□□□□ -1.02
LRRC28-207ENST00000558500 STXBP5LQ9Y2K9 1186 aa8.66□□□□□ -1.02
LRRC28-207ENST00000558500 ADGRA2Q96PE1 1338 aa8.65□□□□□ -1.02
LRRC28-207ENST00000558500 CAPN2P17655 700 aa8.65□□□□□ -1.02
LRRC28-207ENST00000558500 BMP8BP34820 402 aa8.65□□□□□ -1.02
LRRC28-207ENST00000558500 PRKCZQ05513 592 aa8.65□□□□□ -1.02
LRRC28-207ENST00000558500 MFSD14BQ5SR56 506 aa8.65□□□□□ -1.02
LRRC28-207ENST00000558500 CCDC30Q5VVM6 783 aa8.65□□□□□ -1.02
LRRC28-207ENST00000558500 Q7L0L9 218 aa8.65□□□□□ -1.02
LRRC28-207ENST00000558500 ANKRD23Q86SG2 305 aa8.65□□□□□ -1.02
LRRC28-207ENST00000558500 C8orf58Q8NAV2 365 aa8.65□□□□□ -1.02
LRRC28-207ENST00000558500 SLAIN1Q8ND83 568 aa8.65□□□□□ -1.02
LRRC28-207ENST00000558500 ZKSCAN4Q969J2 545 aaPredicted RBP8.65□□□□□ -1.02
LRRC28-207ENST00000558500 RNF25Q96BH1 459 aaPredicted RBP8.65□□□□□ -1.02
LRRC28-207ENST00000558500 WRNIP1Q96S55 665 aa8.65□□□□□ -1.02
LRRC28-207ENST00000558500 GDF15Q99988 308 aa8.65□□□□□ -1.02
LRRC28-207ENST00000558500 CHMP4AQ9BY43 222 aa8.65□□□□□ -1.02
LRRC28-207ENST00000558500 IFT57Q9NWB7 429 aa8.65□□□□□ -1.02
LRRC28-207ENST00000558500 ANKRD18BA2A2Z9 1011 aa8.64□□□□□ -1.03
LRRC28-207ENST00000558500 PDHXO00330 501 aa8.64□□□□□ -1.03
LRRC28-207ENST00000558500 CRKP46108 304 aa8.64□□□□□ -1.03
LRRC28-207ENST00000558500 CASP7P55210 303 aa8.64□□□□□ -1.03
LRRC28-207ENST00000558500 GNAI1P63096 354 aa8.64□□□□□ -1.03
LRRC28-207ENST00000558500 PPATQ06203 517 aa8.64□□□□□ -1.03
LRRC28-207ENST00000558500 GCKRQ14397 625 aa8.64□□□□□ -1.03
LRRC28-207ENST00000558500 MTMR10Q9NXD2 777 aa8.64□□□□□ -1.03
LRRC28-207ENST00000558500 GALR2O43603 387 aaPredicted RBP8.63□□□□□ -1.03
LRRC28-207ENST00000558500 TFRCP02786 760 aaKnown RBP8.63□□□□□ -1.03
LRRC28-207ENST00000558500 FCGRTP55899 365 aa8.63□□□□□ -1.03
LRRC28-207ENST00000558500 LRIT3Q3SXY7 679 aa8.63□□□□□ -1.03
LRRC28-207ENST00000558500 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.63□□□□□ -1.03
LRRC28-207ENST00000558500 TDRD7Q8NHU6 1098 aaKnown RBP8.63□□□□□ -1.03
LRRC28-207ENST00000558500 HOOK2Q96ED9 719 aa8.63□□□□□ -1.03
LRRC28-207ENST00000558500 MS4A3Q96HJ5 214 aa8.63□□□□□ -1.03
LRRC28-207ENST00000558500 GABRQQ9UN88 632 aa8.63□□□□□ -1.03
LRRC28-207ENST00000558500 KCNH4Q9UQ05 1017 aa8.63□□□□□ -1.03
LRRC28-207ENST00000558500 ZSWIM8A7E2V4 1837 aa8.63□□□□□ -1.03
LRRC28-207ENST00000558500 OTOFQ9HC10 1997 aa8.62□□□□□ -1.03
LRRC28-207ENST00000558500 MAP3K13O43283 966 aa8.62□□□□□ -1.03
LRRC28-207ENST00000558500 ADCY3O60266 1144 aa8.62□□□□□ -1.03
LRRC28-207ENST00000558500 INHAP05111 366 aa8.62□□□□□ -1.03
LRRC28-207ENST00000558500 PYGBP11216 843 aa8.62□□□□□ -1.03
LRRC28-207ENST00000558500 BCRP11274 1271 aa8.62□□□□□ -1.03
LRRC28-207ENST00000558500 CACNB3P54284 484 aa8.62□□□□□ -1.03
LRRC28-207ENST00000558500 CALD1Q05682 793 aaKnown RBP8.62□□□□□ -1.03
LRRC28-207ENST00000558500 IFIT5Q13325 482 aaKnown RBP8.62□□□□□ -1.03
LRRC28-207ENST00000558500 MOGSQ13724 837 aa8.62□□□□□ -1.03
LRRC28-207ENST00000558500 RALBP1Q15311 655 aa8.62□□□□□ -1.03
LRRC28-207ENST00000558500 GRIK5Q16478 980 aa8.62□□□□□ -1.03
LRRC28-207ENST00000558500 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.62□□□□□ -1.03
LRRC28-207ENST00000558500 PAWRQ96IZ0 340 aaKnown RBP8.62□□□□□ -1.03
LRRC28-207ENST00000558500 DEFB118Q96PH6 123 aa8.62□□□□□ -1.03
LRRC28-207ENST00000558500 PARK7Q99497 189 aaKnown RBP8.62□□□□□ -1.03
LRRC28-207ENST00000558500 CYP2C8P10632 490 aa8.61□□□□□ -1.03
LRRC28-207ENST00000558500 ELNP15502 786 aa8.61□□□□□ -1.03
LRRC28-207ENST00000558500 INPP5BP32019 993 aa8.61□□□□□ -1.03
LRRC28-207ENST00000558500 FLT3LGP49771 235 aa8.61□□□□□ -1.03
LRRC28-207ENST00000558500 BCAMP50895 628 aa8.61□□□□□ -1.03
LRRC28-207ENST00000558500 HDLBPQ00341 1268 aaKnown RBP8.61□□□□□ -1.03
LRRC28-207ENST00000558500 WDR43Q15061 677 aaKnown RBP eCLIP8.61□□□□□ -1.03
LRRC28-207ENST00000558500 FKBP1CQ5VVH2 108 aa8.61□□□□□ -1.03
LRRC28-207ENST00000558500 DCAF15Q66K64 600 aa8.61□□□□□ -1.03
LRRC28-207ENST00000558500 G2E3Q7L622 706 aa8.61□□□□□ -1.03
LRRC28-207ENST00000558500 NECAB2Q7Z6G3 386 aa8.61□□□□□ -1.03
LRRC28-207ENST00000558500 FAM83AQ86UY5 434 aa8.61□□□□□ -1.03
LRRC28-207ENST00000558500 C7orf61Q8IZ16 206 aa8.61□□□□□ -1.03
LRRC28-207ENST00000558500 TSPYL6Q8N831 410 aa8.61□□□□□ -1.03
LRRC28-207ENST00000558500 PXYLP1Q8TE99 480 aa8.61□□□□□ -1.03
LRRC28-207ENST00000558500 STK31Q9BXU1 1019 aa8.61□□□□□ -1.03
LRRC28-207ENST00000558500 ZNF341Q9BYN7 854 aa8.61□□□□□ -1.03
LRRC28-207ENST00000558500 CRISPLD2Q9H0B8 497 aa8.61□□□□□ -1.03
LRRC28-207ENST00000558500 MYH16Q9H6N6 1097 aa8.61□□□□□ -1.03
LRRC28-207ENST00000558500 PAK6Q9NQU5 681 aaPredicted RBP8.61□□□□□ -1.03
LRRC28-207ENST00000558500 ZMYND8Q9ULU4 1186 aaPredicted RBP8.61□□□□□ -1.03
LRRC28-207ENST00000558500 ADAMTS8Q9UP79 889 aa8.61□□□□□ -1.03
LRRC28-207ENST00000558500 TTC28Q96AY4 2481 aa8.6□□□□□ -1.03
LRRC28-207ENST00000558500 PLIN1O60240 522 aa8.6□□□□□ -1.03
LRRC28-207ENST00000558500 HIBADHP31937 336 aaKnown RBP8.6□□□□□ -1.03
LRRC28-207ENST00000558500 GYG1P46976 350 aa8.6□□□□□ -1.03
LRRC28-207ENST00000558500 FOXO4P98177 505 aa8.6□□□□□ -1.03
LRRC28-207ENST00000558500 IRF5Q13568 498 aa8.6□□□□□ -1.03
LRRC28-207ENST00000558500 GPAT2Q6NUI2 795 aa8.6□□□□□ -1.03
LRRC28-207ENST00000558500 LDHAL6AQ6ZMR3 332 aa8.6□□□□□ -1.03
LRRC28-207ENST00000558500 MIGA2Q7L4E1 593 aa8.6□□□□□ -1.03
LRRC28-207ENST00000558500 TDHQ8IZJ6 230 aa8.6□□□□□ -1.03
LRRC28-207ENST00000558500 LINS1Q8NG48 757 aa8.6□□□□□ -1.03
LRRC28-207ENST00000558500 DIS3LQ8TF46 1054 aaKnown RBP8.6□□□□□ -1.03
LRRC28-207ENST00000558500 TEKT1Q969V4 418 aa8.6□□□□□ -1.03
LRRC28-207ENST00000558500 FAM84BQ96KN1 310 aaPredicted RBP8.6□□□□□ -1.03
LRRC28-207ENST00000558500 TMOD2Q9NZR1 351 aa8.6□□□□□ -1.03
LRRC28-207ENST00000558500 PCDHB13Q9Y5F0 798 aa8.6□□□□□ -1.03
LRRC28-207ENST00000558500 RPAP1Q9BWH6 1393 aaPredicted RBP8.6□□□□□ -1.03
LRRC28-207ENST00000558500 ECM29Q5VYK3 1845 aa8.59□□□□□ -1.03
LRRC28-207ENST00000558500 CXCL11O14625 94 aa8.59□□□□□ -1.03
LRRC28-207ENST00000558500 TNPO2O14787 897 aaKnown RBP8.59□□□□□ -1.03
LRRC28-207ENST00000558500 CHRM1P11229 460 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms