RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 HOMER1Q86YM7 354 aa1.92□□□□□ -2.1
CTDSPL2-202ENST00000558373 GIMAP7Q8NHV1 300 aa1.92□□□□□ -2.1
CTDSPL2-202ENST00000558373 BSNDQ8WZ55 320 aa1.92□□□□□ -2.1
CTDSPL2-202ENST00000558373 SLC26A8Q96RN1 970 aa1.92□□□□□ -2.1
CTDSPL2-202ENST00000558373 GAS2L1Q99501 681 aaPredicted RBP1.92□□□□□ -2.1
CTDSPL2-202ENST00000558373 ADAM19Q9H013 955 aa1.92□□□□□ -2.1
CTDSPL2-202ENST00000558373 MIR1-1HGQ9H1L0 117 aa1.92□□□□□ -2.1
CTDSPL2-202ENST00000558373 ARNTLO00327 626 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 ARAFP10398 606 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 RACK1P63244 317 aaKnown RBP1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 LONRF2Q1L5Z9 754 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 SMARCC1Q92922 1105 aaPredicted RBP1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 SETDB2Q96T68 719 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 INSM2Q96T92 566 aaPredicted RBP1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 ZCCHC2Q9C0B9 1178 aaKnown RBP1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 CDIP1Q9H305 208 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 ADAM30Q9UKF2 790 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 AKAP2Q9Y2D5 859 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 PRDM2Q13029 1718 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 TRIOO75962 3097 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 SOX9P48436 509 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 AFF1P51825 1210 aaKnown RBP1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 FCGRTP55899 365 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 TNP2Q05952 138 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 GRM2Q14416 872 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 ELMSAN1Q6PJG2 1045 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 PRICKLE2Q7Z3G6 844 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 SLITRK4Q8IW52 837 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 OSMRQ99650 979 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 YIPF2Q9BWQ6 316 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 PBX4Q9BYU1 374 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 MBIPQ9NS73 344 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 PRKAG3Q9UGI9 489 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 GDF2Q9UK05 429 aaPredicted RBP1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 PARP3Q9Y6F1 533 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 A0A096LPE4 126 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 A0A1W2PPZ6 126 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 SLFN14P0C7P3 912 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 ATF4P18848 351 aaPredicted RBP1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 FGFR3P22607 806 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 CCNFP41002 786 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 LIG3P49916 1009 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 IGBP1P78318 339 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 HDXQ7Z353 690 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 CCNJLQ8IV13 435 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 CRACR2BQ8N4Y2 399 aaPredicted RBP1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 DTWD1Q8N5C7 304 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 GOLGA6L1Q8N7Z2 621 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 ZNF507Q8TCN5 953 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 TRPM4Q8TD43 1214 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 COX4I2Q96KJ9 171 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 SRRTQ9BXP5 876 aaKnown RBP1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 UBE2OQ9C0C9 1292 aaKnown RBP1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 ANKRD62A6NC57 917 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 ADARB2-AS1A8MUL3 147 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 THBS2P35442 1172 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 CTSOP43234 321 aaPredicted RBP1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 PAK2Q13177 524 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 ORC1Q13415 861 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 MTMR3Q13615 1198 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 SDE2Q6IQ49 451 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 AGMOQ6ZNB7 445 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 RIPOR1Q6ZS17 1223 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 FAM214BQ7L5A3 538 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 DHX32Q7L7V1 743 aaKnown RBP1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 VWA5B2Q8N398 1253 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 ENAMQ9NRM1 1142 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 GEMIN8Q9NWZ8 242 aaKnown RBP1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 BRCA2P51587 3418 aa1.91□□□□□ -2.1
CTDSPL2-202ENST00000558373 DNAJA1P31689 397 aaKnown RBP1.9□□□□□ -2.1
CTDSPL2-202ENST00000558373 PIP4K2BP78356 416 aa1.9□□□□□ -2.1
CTDSPL2-202ENST00000558373 SPEM2Q0P670 501 aa1.9□□□□□ -2.1
CTDSPL2-202ENST00000558373 C6orf118Q5T5N4 469 aa1.9□□□□□ -2.1
CTDSPL2-202ENST00000558373 LLGL2Q6P1M3 1020 aa1.9□□□□□ -2.1
CTDSPL2-202ENST00000558373 Q6ZS46 218 aa1.9□□□□□ -2.1
CTDSPL2-202ENST00000558373 ATCAYQ86WG3 371 aa1.9□□□□□ -2.1
CTDSPL2-202ENST00000558373 FAM177A1Q8N128 213 aaPredicted RBP1.9□□□□□ -2.1
CTDSPL2-202ENST00000558373 SVOPQ8N4V2 548 aa1.9□□□□□ -2.1
CTDSPL2-202ENST00000558373 GPATCH3Q96I76 525 aa1.9□□□□□ -2.1
CTDSPL2-202ENST00000558373 DHRS1Q96LJ7 313 aa1.9□□□□□ -2.1
CTDSPL2-202ENST00000558373 TM9SF2Q99805 663 aa1.9□□□□□ -2.1
CTDSPL2-202ENST00000558373 CWC22Q9HCG8 908 aaKnown RBP1.9□□□□□ -2.1
CTDSPL2-202ENST00000558373 GPN3Q9UHW5 284 aaPredicted RBP1.9□□□□□ -2.1
CTDSPL2-202ENST00000558373 FOXD3Q9UJU5 478 aaPredicted RBP1.9□□□□□ -2.1
CTDSPL2-202ENST00000558373 ZBTB39O15060 712 aa1.9□□□□□ -2.11
CTDSPL2-202ENST00000558373 BCRP11274 1271 aa1.9□□□□□ -2.11
CTDSPL2-202ENST00000558373 ANAPC15P60006 121 aa1.9□□□□□ -2.11
CTDSPL2-202ENST00000558373 RNF4P78317 190 aa1.9□□□□□ -2.11
CTDSPL2-202ENST00000558373 FAPQ12884 760 aa1.9□□□□□ -2.11
CTDSPL2-202ENST00000558373 DBN1Q16643 649 aa1.9□□□□□ -2.11
CTDSPL2-202ENST00000558373 C1orf127Q8N9H9 656 aa1.9□□□□□ -2.11
CTDSPL2-202ENST00000558373 OR10H5Q8NGA6 315 aa1.9□□□□□ -2.11
CTDSPL2-202ENST00000558373 PMFBP1Q8TBY8 1022 aa1.9□□□□□ -2.11
CTDSPL2-202ENST00000558373 ZNF296Q8WUU4 475 aaPredicted RBP1.9□□□□□ -2.11
CTDSPL2-202ENST00000558373 APPBP2Q92624 585 aa1.9□□□□□ -2.11
CTDSPL2-202ENST00000558373 NXPE3Q969Y0 559 aa1.9□□□□□ -2.11
CTDSPL2-202ENST00000558373 FERD3LQ96RJ6 166 aa1.9□□□□□ -2.11
CTDSPL2-202ENST00000558373 CLEC4MQ9H2X3 399 aaPredicted RBP1.9□□□□□ -2.11
CTDSPL2-202ENST00000558373 ACTR10Q9NZ32 417 aa1.9□□□□□ -2.11
CTDSPL2-202ENST00000558373 TMEM63CQ9P1W3 806 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms