RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 GPLD1P80108 840 aa9.08□□□□□ -0.96
CLPX-202ENST00000558103 ZNF417Q8TAU3 575 aa9.08□□□□□ -0.96
CLPX-202ENST00000558103 CCER1Q8TC90 406 aaPredicted RBP9.08□□□□□ -0.96
CLPX-202ENST00000558103 ZNF587Q96SQ5 575 aaPredicted RBP9.08□□□□□ -0.96
CLPX-202ENST00000558103 GGNBP2Q9H3C7 697 aa9.08□□□□□ -0.96
CLPX-202ENST00000558103 PRDM6Q9NQX0 595 aa9.08□□□□□ -0.96
CLPX-202ENST00000558103 ROBO2Q9HCK4 1378 aa9.08□□□□□ -0.96
CLPX-202ENST00000558103 SRCAPQ6ZRS2 3230 aa9.07□□□□□ -0.96
CLPX-202ENST00000558103 ALBP02768 609 aa9.07□□□□□ -0.96
CLPX-202ENST00000558103 ECM1Q16610 540 aa9.07□□□□□ -0.96
CLPX-202ENST00000558103 XKR5Q6UX68 686 aa9.07□□□□□ -0.96
CLPX-202ENST00000558103 FAM35AQ86V20 835 aa9.07□□□□□ -0.96
CLPX-202ENST00000558103 AFF2P51816 1311 aa9.06□□□□□ -0.96
CLPX-202ENST00000558103 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.06□□□□□ -0.96
CLPX-202ENST00000558103 FMN2Q9NZ56 1722 aa9.06□□□□□ -0.96
CLPX-202ENST00000558103 LOC102724428A0A0B4J2F2 783 aa9.06□□□□□ -0.96
CLPX-202ENST00000558103 KRBA1A5PL33 1030 aa9.06□□□□□ -0.96
CLPX-202ENST00000558103 SOX18P35713 384 aa9.06□□□□□ -0.96
CLPX-202ENST00000558103 SIK1P57059 783 aa9.06□□□□□ -0.96
CLPX-202ENST00000558103 MLLT1Q03111 559 aaPredicted RBP9.06□□□□□ -0.96
CLPX-202ENST00000558103 PLAURQ03405 335 aa9.06□□□□□ -0.96
CLPX-202ENST00000558103 COL9A3Q14050 684 aaPredicted RBP9.06□□□□□ -0.96
CLPX-202ENST00000558103 TTC39BQ5VTQ0 682 aaPredicted RBP9.06□□□□□ -0.96
CLPX-202ENST00000558103 PDE12Q6L8Q7 609 aaKnown RBP9.06□□□□□ -0.96
CLPX-202ENST00000558103 C8orf86Q6ZUL3 223 aa9.06□□□□□ -0.96
CLPX-202ENST00000558103 TTC16Q8NEE8 873 aa9.06□□□□□ -0.96
CLPX-202ENST00000558103 DDX17Q92841 729 aaKnown RBP9.06□□□□□ -0.96
CLPX-202ENST00000558103 LRRC59Q96AG4 307 aaKnown RBP9.06□□□□□ -0.96
CLPX-202ENST00000558103 ELP3Q9H9T3 547 aa9.06□□□□□ -0.96
CLPX-202ENST00000558103 POLIQ9UNA4 740 aa9.06□□□□□ -0.96
CLPX-202ENST00000558103 RGPD8O14715 1765 aaPredicted RBP9.05□□□□□ -0.96
CLPX-202ENST00000558103 FZD6O60353 706 aa9.05□□□□□ -0.96
CLPX-202ENST00000558103 HOXD8P13378 290 aaPredicted RBP9.05□□□□□ -0.96
CLPX-202ENST00000558103 CPB1P15086 417 aa9.05□□□□□ -0.96
CLPX-202ENST00000558103 RXRBP28702 533 aa9.05□□□□□ -0.96
CLPX-202ENST00000558103 C8orf34Q49A92 452 aa9.05□□□□□ -0.96
CLPX-202ENST00000558103 PSAPL1Q6NUJ1 521 aa9.05□□□□□ -0.96
CLPX-202ENST00000558103 SUV39H2Q9H5I1 410 aa9.05□□□□□ -0.96
CLPX-202ENST00000558103 NAGPAQ9UK23 515 aa9.05□□□□□ -0.96
CLPX-202ENST00000558103 TECPR2O15040 1411 aa9.05□□□□□ -0.96
CLPX-202ENST00000558103 PXDNQ92626 1479 aa9.04□□□□□ -0.96
CLPX-202ENST00000558103 BTBD11A6QL63 1104 aa9.04□□□□□ -0.96
CLPX-202ENST00000558103 LILRB5O75023 590 aa9.04□□□□□ -0.96
CLPX-202ENST00000558103 RGS9O75916 674 aaPredicted RBP9.04□□□□□ -0.96
CLPX-202ENST00000558103 USP5P45974 858 aa9.04□□□□□ -0.96
CLPX-202ENST00000558103 PERM1Q5SV97 790 aa9.04□□□□□ -0.96
CLPX-202ENST00000558103 HFE2Q6ZVN8 426 aa9.04□□□□□ -0.96
CLPX-202ENST00000558103 ZNF438Q7Z4V0 828 aa9.04□□□□□ -0.96
CLPX-202ENST00000558103 GLYCTKQ8IVS8 523 aa9.04□□□□□ -0.96
CLPX-202ENST00000558103 OR13H1Q8NG92 308 aa9.04□□□□□ -0.96
CLPX-202ENST00000558103 NUDT8Q8WV74 236 aa9.04□□□□□ -0.96
CLPX-202ENST00000558103 TRIM11Q96F44 468 aa9.04□□□□□ -0.96
CLPX-202ENST00000558103 TRAIPQ9BWF2 469 aa9.04□□□□□ -0.96
CLPX-202ENST00000558103 CCDC87Q9NVE4 849 aa9.04□□□□□ -0.96
CLPX-202ENST00000558103 ABI2Q9NYB9 513 aaPredicted RBP9.04□□□□□ -0.96
CLPX-202ENST00000558103 GNEQ9Y223 722 aaKnown RBP9.04□□□□□ -0.96
CLPX-202ENST00000558103 KIF1AQ12756 1690 aa9.04□□□□□ -0.96
CLPX-202ENST00000558103 MYOM2P54296 1465 aa9.03□□□□□ -0.96
CLPX-202ENST00000558103 ABCA3Q99758 1704 aa9.03□□□□□ -0.96
CLPX-202ENST00000558103 KRTAP4-8A0A0G2JLE6 195 aa9.03□□□□□ -0.96
CLPX-202ENST00000558103 H3BRB1 525 aa9.03□□□□□ -0.96
CLPX-202ENST00000558103 J3QW42 95 aa9.03□□□□□ -0.96
CLPX-202ENST00000558103 COL8A1P27658 744 aa9.03□□□□□ -0.96
CLPX-202ENST00000558103 ELMSAN1Q6PJG2 1045 aa9.03□□□□□ -0.96
CLPX-202ENST00000558103 PLVAPQ9BX97 442 aa9.03□□□□□ -0.96
CLPX-202ENST00000558103 TUT1Q9H6E5 874 aaKnown RBP9.03□□□□□ -0.96
CLPX-202ENST00000558103 JPH1Q9HDC5 661 aaPredicted RBP9.03□□□□□ -0.96
CLPX-202ENST00000558103 NOP53Q9NZM5 478 aaKnown RBP9.03□□□□□ -0.96
CLPX-202ENST00000558103 FRRS1LQ9P0K9 344 aa9.03□□□□□ -0.96
CLPX-202ENST00000558103 TMEM63CQ9P1W3 806 aa9.03□□□□□ -0.96
CLPX-202ENST00000558103 SPATA31E1Q6ZUB1 1445 aa9.03□□□□□ -0.96
CLPX-202ENST00000558103 RPGRIP1LQ68CZ1 1315 aa9.03□□□□□ -0.96
CLPX-202ENST00000558103 ARHGAP4P98171 946 aa9.02□□□□□ -0.97
CLPX-202ENST00000558103 ALYREFQ86V81 257 aaKnown RBP9.02□□□□□ -0.97
CLPX-202ENST00000558103 TTC9Q92623 222 aa9.02□□□□□ -0.97
CLPX-202ENST00000558103 C8orf37Q96NL8 207 aa9.02□□□□□ -0.97
CLPX-202ENST00000558103 ORAI2Q96SN7 254 aa9.02□□□□□ -0.97
CLPX-202ENST00000558103 LPIN3Q9BQK8 851 aa9.02□□□□□ -0.97
CLPX-202ENST00000558103 A6NHS1 94 aa9.01□□□□□ -0.97
CLPX-202ENST00000558103 PIK3C2GO75747 1445 aa9.01□□□□□ -0.97
CLPX-202ENST00000558103 NID1P14543 1247 aa9.01□□□□□ -0.97
CLPX-202ENST00000558103 AFF1P51825 1210 aaKnown RBP9.01□□□□□ -0.97
CLPX-202ENST00000558103 RBM6P78332 1123 aaKnown RBP9.01□□□□□ -0.97
CLPX-202ENST00000558103 EHHADHQ08426 723 aa9.01□□□□□ -0.97
CLPX-202ENST00000558103 NSUN5Q96P11 429 aaKnown RBP9.01□□□□□ -0.97
CLPX-202ENST00000558103 CNTN3Q9P232 1028 aa9.01□□□□□ -0.97
CLPX-202ENST00000558103 BRWD3Q6RI45 1802 aa9.01□□□□□ -0.97
CLPX-202ENST00000558103 CCDC144AA2RUR9 1427 aa9□□□□□ -0.97
CLPX-202ENST00000558103 ATRNO75882 1429 aa9□□□□□ -0.97
CLPX-202ENST00000558103 HYAL2Q12891 473 aa9□□□□□ -0.97
CLPX-202ENST00000558103 SMG9Q9H0W8 520 aaKnown RBP9□□□□□ -0.97
CLPX-202ENST00000558103 BRPF3Q9ULD4 1205 aa9□□□□□ -0.97
CLPX-202ENST00000558103 USP32Q8NFA0 1604 aa9□□□□□ -0.97
CLPX-202ENST00000558103 PLCH1Q4KWH8 1693 aa9□□□□□ -0.97
CLPX-202ENST00000558103 SOWAHDA6NJG2 315 aa8.99□□□□□ -0.97
CLPX-202ENST00000558103 SPDYE3A6NKU9 549 aa8.99□□□□□ -0.97
CLPX-202ENST00000558103 CYP2E1P05181 493 aaPredicted RBP8.99□□□□□ -0.97
CLPX-202ENST00000558103 EIF2AK2P19525 551 aaKnown RBP8.99□□□□□ -0.97
CLPX-202ENST00000558103 COL13A1Q5TAT6 717 aaPredicted RBP8.99□□□□□ -0.97
CLPX-202ENST00000558103 GJD3Q8N144 294 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms