RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 HMX1Q9NP08 348 aaPredicted RBP12.55□□□□□ -0.4
IGKV2D-28-202ENST00000558026 MAST2Q6P0Q8 1798 aa12.54□□□□□ -0.4
IGKV2D-28-202ENST00000558026 HMGCRP04035 888 aa12.54□□□□□ -0.4
IGKV2D-28-202ENST00000558026 NFE2L2Q16236 605 aa12.54□□□□□ -0.4
IGKV2D-28-202ENST00000558026 DZIP1LQ8IYY4 767 aaKnown RBP12.54□□□□□ -0.4
IGKV2D-28-202ENST00000558026 TTLL11Q8NHH1 800 aa12.54□□□□□ -0.4
IGKV2D-28-202ENST00000558026 MYD88Q99836 296 aa12.54□□□□□ -0.4
IGKV2D-28-202ENST00000558026 KCNH4Q9UQ05 1017 aa12.54□□□□□ -0.4
IGKV2D-28-202ENST00000558026 MYH3P11055 1940 aa12.54□□□□□ -0.4
IGKV2D-28-202ENST00000558026 AK9Q5TCS8 1911 aa12.53□□□□□ -0.4
IGKV2D-28-202ENST00000558026 KCNJ4P48050 445 aa12.53□□□□□ -0.4
IGKV2D-28-202ENST00000558026 TNNI2P48788 182 aa12.53□□□□□ -0.4
IGKV2D-28-202ENST00000558026 SMAD3P84022 425 aaKnown RBP12.53□□□□□ -0.4
IGKV2D-28-202ENST00000558026 THEGQ9P2T0 379 aa12.53□□□□□ -0.4
IGKV2D-28-202ENST00000558026 MIGA2Q7L4E1 593 aa12.52□□□□□ -0.41
IGKV2D-28-202ENST00000558026 RIC3Q7Z5B4 369 aa12.52□□□□□ -0.41
IGKV2D-28-202ENST00000558026 COA7Q96BR5 231 aa12.52□□□□□ -0.41
IGKV2D-28-202ENST00000558026 EPHX3Q9H6B9 360 aa12.52□□□□□ -0.41
IGKV2D-28-202ENST00000558026 TTF2Q9UNY4 1162 aaKnown RBP12.52□□□□□ -0.41
IGKV2D-28-202ENST00000558026 FKBP1AP62942 108 aaKnown RBP12.51□□□□□ -0.41
IGKV2D-28-202ENST00000558026 HDGFL1Q5TGJ6 251 aa12.51□□□□□ -0.41
IGKV2D-28-202ENST00000558026 PLEKHF1Q96S99 279 aa12.51□□□□□ -0.41
IGKV2D-28-202ENST00000558026 MYO9BQ13459 2157 aa12.51□□□□□ -0.41
IGKV2D-28-202ENST00000558026 NEFMP07197 916 aa12.5□□□□□ -0.41
IGKV2D-28-202ENST00000558026 IL1R1P14778 569 aa12.5□□□□□ -0.41
IGKV2D-28-202ENST00000558026 MRPS5P82675 430 aaKnown RBP12.5□□□□□ -0.41
IGKV2D-28-202ENST00000558026 POTEEQ6S8J3 1075 aa12.5□□□□□ -0.41
IGKV2D-28-202ENST00000558026 ANKRD13CQ8N6S4 541 aa12.5□□□□□ -0.41
IGKV2D-28-202ENST00000558026 CCDC191Q8NCU4 936 aa12.5□□□□□ -0.41
IGKV2D-28-202ENST00000558026 ANKRD2Q9GZV1 360 aa12.5□□□□□ -0.41
IGKV2D-28-202ENST00000558026 CWC25Q9NXE8 425 aaPredicted RBP12.5□□□□□ -0.41
IGKV2D-28-202ENST00000558026 SERPINA10Q9UK55 444 aa12.5□□□□□ -0.41
IGKV2D-28-202ENST00000558026 PLXNB2O15031 1838 aa12.49□□□□□ -0.41
IGKV2D-28-202ENST00000558026 TAF5LO75529 589 aa12.49□□□□□ -0.41
IGKV2D-28-202ENST00000558026 IGHMBP2P38935 993 aaKnown RBP12.49□□□□□ -0.41
IGKV2D-28-202ENST00000558026 CRKP46108 304 aa12.49□□□□□ -0.41
IGKV2D-28-202ENST00000558026 MRE11P49959 708 aa12.49□□□□□ -0.41
IGKV2D-28-202ENST00000558026 CHRNDQ07001 517 aa12.49□□□□□ -0.41
IGKV2D-28-202ENST00000558026 TRIB2Q92519 343 aa12.49□□□□□ -0.41
IGKV2D-28-202ENST00000558026 DBF4Q9UBU7 674 aaPredicted RBP12.49□□□□□ -0.41
IGKV2D-28-202ENST00000558026 PRKAR2AP13861 404 aaKnown RBP12.48□□□□□ -0.41
IGKV2D-28-202ENST00000558026 ATN1P54259 1190 aaPredicted RBP12.48□□□□□ -0.41
IGKV2D-28-202ENST00000558026 PDE3AQ14432 1141 aa12.48□□□□□ -0.41
IGKV2D-28-202ENST00000558026 GRIK5Q16478 980 aa12.48□□□□□ -0.41
IGKV2D-28-202ENST00000558026 MFSD14BQ5SR56 506 aa12.48□□□□□ -0.41
IGKV2D-28-202ENST00000558026 GADL1Q6ZQY3 521 aa12.48□□□□□ -0.41
IGKV2D-28-202ENST00000558026 ZNF804AQ7Z570 1209 aa12.48□□□□□ -0.41
IGKV2D-28-202ENST00000558026 IL27Q8NEV9 243 aa12.48□□□□□ -0.41
IGKV2D-28-202ENST00000558026 SMCR8Q8TEV9 937 aaPredicted RBP12.48□□□□□ -0.41
IGKV2D-28-202ENST00000558026 ZNF341Q9BYN7 854 aa12.48□□□□□ -0.41
IGKV2D-28-202ENST00000558026 PHAXQ9H814 394 aaKnown RBP12.48□□□□□ -0.41
IGKV2D-28-202ENST00000558026 HYPKQ9NX55 129 aa12.48□□□□□ -0.41
IGKV2D-28-202ENST00000558026 A0A1B0GUL6 1792 aa12.48□□□□□ -0.41
IGKV2D-28-202ENST00000558026 GOLGA2Q08379 1002 aa12.47□□□□□ -0.41
IGKV2D-28-202ENST00000558026 CCDC85BQ15834 202 aaPredicted RBP12.47□□□□□ -0.41
IGKV2D-28-202ENST00000558026 TMEM31Q5JXX7 168 aa12.47□□□□□ -0.41
IGKV2D-28-202ENST00000558026 MAP3K21Q5TCX8 1036 aa12.47□□□□□ -0.41
IGKV2D-28-202ENST00000558026 DCAF15Q66K64 600 aa12.47□□□□□ -0.41
IGKV2D-28-202ENST00000558026 P2RX7Q99572 595 aaKnown RBP12.47□□□□□ -0.41
IGKV2D-28-202ENST00000558026 SENP6Q9GZR1 1112 aaPredicted RBP12.47□□□□□ -0.41
IGKV2D-28-202ENST00000558026 GJD2Q9UKL4 321 aa12.47□□□□□ -0.41
IGKV2D-28-202ENST00000558026 PTPRFP10586 1907 aa12.47□□□□□ -0.41
IGKV2D-28-202ENST00000558026 FRMPD3Q5JV73 1810 aa12.46□□□□□ -0.41
IGKV2D-28-202ENST00000558026 FAM86C2PA6NEL3 165 aa12.46□□□□□ -0.41
IGKV2D-28-202ENST00000558026 PPP2R1AP30153 589 aa12.46□□□□□ -0.41
IGKV2D-28-202ENST00000558026 LHX8Q68G74 356 aa12.46□□□□□ -0.41
IGKV2D-28-202ENST00000558026 C15orf52Q6ZUT6 534 aaKnown RBP12.46□□□□□ -0.41
IGKV2D-28-202ENST00000558026 BADQ92934 168 aa12.46□□□□□ -0.41
IGKV2D-28-202ENST00000558026 MPHOSPH8Q99549 860 aa12.46□□□□□ -0.41
IGKV2D-28-202ENST00000558026 PRKAG2Q9UGJ0 569 aa12.46□□□□□ -0.41
IGKV2D-28-202ENST00000558026 A0A0G2JLL6 359 aaPredicted RBP12.45□□□□□ -0.42
IGKV2D-28-202ENST00000558026 CXCL11O14625 94 aa12.45□□□□□ -0.42
IGKV2D-28-202ENST00000558026 ITGA6P23229 1130 aa12.45□□□□□ -0.42
IGKV2D-28-202ENST00000558026 DNAJB2P25686 324 aa12.45□□□□□ -0.42
IGKV2D-28-202ENST00000558026 CCND3P30281 292 aaPredicted RBP12.45□□□□□ -0.42
IGKV2D-28-202ENST00000558026 PRRT2Q7Z6L0 340 aaPredicted RBP12.45□□□□□ -0.42
IGKV2D-28-202ENST00000558026 C11orf16Q9NQ32 467 aa12.45□□□□□ -0.42
IGKV2D-28-202ENST00000558026 BABAM1Q9NWV8 329 aa12.45□□□□□ -0.42
IGKV2D-28-202ENST00000558026 ZNF112Q9UJU3 913 aa12.45□□□□□ -0.42
IGKV2D-28-202ENST00000558026 BMP1P13497 986 aa12.44□□□□□ -0.42
IGKV2D-28-202ENST00000558026 CYP2B6P20813 491 aa12.44□□□□□ -0.42
IGKV2D-28-202ENST00000558026 RTP1P59025 263 aa12.44□□□□□ -0.42
IGKV2D-28-202ENST00000558026 FASTKD5Q7L8L6 764 aaKnown RBP12.44□□□□□ -0.42
IGKV2D-28-202ENST00000558026 HOOK2Q96ED9 719 aa12.44□□□□□ -0.42
IGKV2D-28-202ENST00000558026 ZNF576Q9H609 170 aa12.44□□□□□ -0.42
IGKV2D-28-202ENST00000558026 PRDM5Q9NQX1 630 aaPredicted RBP12.44□□□□□ -0.42
IGKV2D-28-202ENST00000558026 REV3LO60673 3130 aa12.43□□□□□ -0.42
IGKV2D-28-202ENST00000558026 CACNB2Q08289 660 aaPredicted RBP12.43□□□□□ -0.42
IGKV2D-28-202ENST00000558026 FAM110CQ1W6H9 321 aa12.43□□□□□ -0.42
IGKV2D-28-202ENST00000558026 NOL9Q5SY16 702 aaKnown RBP12.43□□□□□ -0.42
IGKV2D-28-202ENST00000558026 FAM83AQ86UY5 434 aa12.43□□□□□ -0.42
IGKV2D-28-202ENST00000558026 RNPC3Q96LT9 517 aaKnown RBP12.43□□□□□ -0.42
IGKV2D-28-202ENST00000558026 METTL22Q9BUU2 404 aaPredicted RBP12.43□□□□□ -0.42
IGKV2D-28-202ENST00000558026 PRDM12Q9H4Q4 367 aa12.43□□□□□ -0.42
IGKV2D-28-202ENST00000558026 ATP11BQ9Y2G3 1177 aa12.43□□□□□ -0.42
IGKV2D-28-202ENST00000558026 LAS1LQ9Y4W2 734 aaKnown RBP12.43□□□□□ -0.42
IGKV2D-28-202ENST00000558026 ZHX2Q9Y6X8 837 aa12.43□□□□□ -0.42
IGKV2D-28-202ENST00000558026 MAPK8IP3Q9UPT6 1336 aa12.42□□□□□ -0.42
IGKV2D-28-202ENST00000558026 IGKV5-2P06315 115 aa12.42□□□□□ -0.42
IGKV2D-28-202ENST00000558026 EPHB4P54760 987 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms