RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 SREBF2Q12772 1141 aa20.58■□□□□ 0.89
NEDD4-212ENST00000557845 TNNI3KQ59H18 835 aa20.58■□□□□ 0.89
NEDD4-212ENST00000557845 SPATA5Q8NB90 893 aa20.58■□□□□ 0.89
NEDD4-212ENST00000557845 WNK4Q96J92 1243 aa20.58■□□□□ 0.89
NEDD4-212ENST00000557845 USP40Q9NVE5 1235 aa20.58■□□□□ 0.89
NEDD4-212ENST00000557845 FPGT-TNNI3KV9GXZ4 949 aa20.58■□□□□ 0.89
NEDD4-212ENST00000557845 ERICH6Q7L0X2 663 aa20.57■□□□□ 0.88
NEDD4-212ENST00000557845 DZIP1Q86YF9 867 aaKnown RBP20.57■□□□□ 0.88
NEDD4-212ENST00000557845 FAM151AQ8WW52 585 aa20.57■□□□□ 0.88
NEDD4-212ENST00000557845 FAM163AQ96GL9 167 aaPredicted RBP20.57■□□□□ 0.88
NEDD4-212ENST00000557845 MANSC4A6NHS7 340 aaPredicted RBP20.56■□□□□ 0.88
NEDD4-212ENST00000557845 UQCRFS1P1P0C7P4 283 aa20.56■□□□□ 0.88
NEDD4-212ENST00000557845 INHBEP58166 350 aa20.56■□□□□ 0.88
NEDD4-212ENST00000557845 MAP3K9P80192 1104 aa20.56■□□□□ 0.88
NEDD4-212ENST00000557845 PI16Q6UXB8 463 aa20.56■□□□□ 0.88
NEDD4-212ENST00000557845 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.56■□□□□ 0.88
NEDD4-212ENST00000557845 SLF2Q8IX21 1173 aa20.56■□□□□ 0.88
NEDD4-212ENST00000557845 HOOK2Q96ED9 719 aa20.56■□□□□ 0.88
NEDD4-212ENST00000557845 DDX19BQ9UMR2 479 aa20.56■□□□□ 0.88
NEDD4-212ENST00000557845 COG6Q9Y2V7 657 aa20.56■□□□□ 0.88
NEDD4-212ENST00000557845 OTOFQ9HC10 1997 aa20.55■□□□□ 0.88
NEDD4-212ENST00000557845 GAKO14976 1311 aa20.55■□□□□ 0.88
NEDD4-212ENST00000557845 TBC1D8O95759 1140 aa20.55■□□□□ 0.88
NEDD4-212ENST00000557845 MCAMP43121 646 aa20.55■□□□□ 0.88
NEDD4-212ENST00000557845 TCP10Q12799 353 aa20.55■□□□□ 0.88
NEDD4-212ENST00000557845 NFIAQ12857 509 aa20.55■□□□□ 0.88
NEDD4-212ENST00000557845 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.55■□□□□ 0.88
NEDD4-212ENST00000557845 DBNDD2Q9BQY9 259 aa20.55■□□□□ 0.88
NEDD4-212ENST00000557845 ELP3Q9H9T3 547 aa20.55■□□□□ 0.88
NEDD4-212ENST00000557845 AK9Q5TCS8 1911 aa20.55■□□□□ 0.88
NEDD4-212ENST00000557845 GJA5P36382 358 aa20.54■□□□□ 0.88
NEDD4-212ENST00000557845 MECOMQ03112 1051 aa20.54■□□□□ 0.88
NEDD4-212ENST00000557845 CCDC158Q5M9N0 1113 aa20.54■□□□□ 0.88
NEDD4-212ENST00000557845 TBC1D9Q6ZT07 1266 aa20.54■□□□□ 0.88
NEDD4-212ENST00000557845 FAM198AQ9UFP1 575 aa20.54■□□□□ 0.88
NEDD4-212ENST00000557845 RPAP1Q9BWH6 1393 aaPredicted RBP20.54■□□□□ 0.88
NEDD4-212ENST00000557845 LAMB1P07942 1786 aa20.54■□□□□ 0.88
NEDD4-212ENST00000557845 VGLL4Q14135 290 aa20.53■□□□□ 0.88
NEDD4-212ENST00000557845 TTC39AQ5SRH9 613 aa20.53■□□□□ 0.88
NEDD4-212ENST00000557845 OPTNQ96CV9 577 aa20.53■□□□□ 0.88
NEDD4-212ENST00000557845 ZBTB40Q9NUA8 1239 aa20.53■□□□□ 0.88
NEDD4-212ENST00000557845 DCAF15Q66K64 600 aa20.52■□□□□ 0.88
NEDD4-212ENST00000557845 MIGA2Q7L4E1 593 aa20.52■□□□□ 0.88
NEDD4-212ENST00000557845 IFNL1Q8IU54 200 aa20.52■□□□□ 0.88
NEDD4-212ENST00000557845 RPAP2Q8IXW5 612 aaPredicted RBP20.52■□□□□ 0.88
NEDD4-212ENST00000557845 ZNF384Q8TF68 577 aa20.52■□□□□ 0.88
NEDD4-212ENST00000557845 EAF2Q96CJ1 260 aaPredicted RBP20.52■□□□□ 0.88
NEDD4-212ENST00000557845 ABHD8Q96I13 439 aa20.52■□□□□ 0.88
NEDD4-212ENST00000557845 IDI2Q9BXS1 227 aa20.52■□□□□ 0.88
NEDD4-212ENST00000557845 CCDC8Q9H0W5 538 aaPredicted RBP20.52■□□□□ 0.88
NEDD4-212ENST00000557845 EXOC6BQ9Y2D4 811 aa20.52■□□□□ 0.88
NEDD4-212ENST00000557845 CSADQ9Y600 493 aa20.52■□□□□ 0.88
NEDD4-212ENST00000557845 GPR75-ASB3A0A0A6YYF3 556 aa20.51■□□□□ 0.87
NEDD4-212ENST00000557845 ALDH1A1P00352 501 aa20.51■□□□□ 0.87
NEDD4-212ENST00000557845 BTDP43251 543 aa20.51■□□□□ 0.87
NEDD4-212ENST00000557845 DGKZQ13574 1117 aa20.51■□□□□ 0.87
NEDD4-212ENST00000557845 ZFPM1Q8IX07 1006 aa20.51■□□□□ 0.87
NEDD4-212ENST00000557845 NSUN4Q96CB9 384 aaKnown RBP20.51■□□□□ 0.87
NEDD4-212ENST00000557845 ZNF512BQ96KM6 892 aaPredicted RBP20.51■□□□□ 0.87
NEDD4-212ENST00000557845 CFHR5Q9BXR6 569 aa20.51■□□□□ 0.87
NEDD4-212ENST00000557845 MCOLN1Q9GZU1 580 aa20.51■□□□□ 0.87
NEDD4-212ENST00000557845 CHMP4BQ9H444 224 aaKnown RBP20.51■□□□□ 0.87
NEDD4-212ENST00000557845 RAI14Q9P0K7 980 aa20.51■□□□□ 0.87
NEDD4-212ENST00000557845 MROH7-TTC4A0A0A0MT08 1334 aa20.51■□□□□ 0.87
NEDD4-212ENST00000557845 TESPA1A2RU30 521 aaPredicted RBP20.5■□□□□ 0.87
NEDD4-212ENST00000557845 ENTPD3O75355 529 aa20.5■□□□□ 0.87
NEDD4-212ENST00000557845 LDHCP07864 332 aa20.5■□□□□ 0.87
NEDD4-212ENST00000557845 GSTO1P78417 241 aa20.5■□□□□ 0.87
NEDD4-212ENST00000557845 PDE3AQ14432 1141 aa20.5■□□□□ 0.87
NEDD4-212ENST00000557845 ERC1Q8IUD2 1116 aa20.5■□□□□ 0.87
NEDD4-212ENST00000557845 CNKSR2Q8WXI2 1034 aa20.5■□□□□ 0.87
NEDD4-212ENST00000557845 ZKSCAN4Q969J2 545 aaPredicted RBP20.5■□□□□ 0.87
NEDD4-212ENST00000557845 WRNIP1Q96S55 665 aa20.5■□□□□ 0.87
NEDD4-212ENST00000557845 ZNF341Q9BYN7 854 aa20.5■□□□□ 0.87
NEDD4-212ENST00000557845 SNRKQ9NRH2 765 aa20.5■□□□□ 0.87
NEDD4-212ENST00000557845 LRP2BPQ9P2M1 347 aa20.5■□□□□ 0.87
NEDD4-212ENST00000557845 DBNLQ9UJU6 430 aaKnown RBP20.5■□□□□ 0.87
NEDD4-212ENST00000557845 RGS3P49796 1198 aa20.49■□□□□ 0.87
NEDD4-212ENST00000557845 HSP90AB4PQ58FF6 505 aa20.49■□□□□ 0.87
NEDD4-212ENST00000557845 C20orf194Q5TEA3 1177 aa20.49■□□□□ 0.87
NEDD4-212ENST00000557845 SIRT2Q8IXJ6 389 aa20.49■□□□□ 0.87
NEDD4-212ENST00000557845 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.49■□□□□ 0.87
NEDD4-212ENST00000557845 R3HDMLQ9H3Y0 253 aa20.49■□□□□ 0.87
NEDD4-212ENST00000557845 TLR7Q9NYK1 1049 aaKnown RBP20.49■□□□□ 0.87
NEDD4-212ENST00000557845 SNCAIPQ9Y6H5 919 aa20.49■□□□□ 0.87
NEDD4-212ENST00000557845 GPR25O00155 361 aa20.48■□□□□ 0.87
NEDD4-212ENST00000557845 IGF2BP3O00425 579 aaKnown RBP eCLIP20.48■□□□□ 0.87
NEDD4-212ENST00000557845 NOM1Q5C9Z4 860 aaKnown RBP20.48■□□□□ 0.87
NEDD4-212ENST00000557845 OTUD7BQ6GQQ9 843 aa20.48■□□□□ 0.87
NEDD4-212ENST00000557845 ZNF296Q8WUU4 475 aaPredicted RBP20.48■□□□□ 0.87
NEDD4-212ENST00000557845 MS4A4AQ96JQ5 239 aa20.48■□□□□ 0.87
NEDD4-212ENST00000557845 PTPN18Q99952 460 aa20.48■□□□□ 0.87
NEDD4-212ENST00000557845 ZNF112Q9UJU3 913 aa20.48■□□□□ 0.87
NEDD4-212ENST00000557845 SPDYE5A6NIY4 337 aa20.47■□□□□ 0.87
NEDD4-212ENST00000557845 WDHD1O75717 1129 aaPredicted RBP20.47■□□□□ 0.87
NEDD4-212ENST00000557845 CYP2E1P05181 493 aaPredicted RBP20.47■□□□□ 0.87
NEDD4-212ENST00000557845 RHBDL3P58872 404 aa20.47■□□□□ 0.87
NEDD4-212ENST00000557845 ERO1BQ86YB8 467 aa20.47■□□□□ 0.87
NEDD4-212ENST00000557845 RHPN1Q8TCX5 695 aa20.47■□□□□ 0.87
NEDD4-212ENST00000557845 OTUD5Q96G74 571 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms