RNA–Protein interactions for RNA: ENST00000557640.1

RD3L-201, Transcript of retinal degeneration 3 like, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RD3L, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3L-201ENST00000557640 TCIRG1Q13488 830 aa10.42□□□□□ -0.74
RD3L-201ENST00000557640 KIF4BQ2VIQ3 1234 aa10.42□□□□□ -0.74
RD3L-201ENST00000557640 RBM26Q5T8P6 1007 aaKnown RBP10.42□□□□□ -0.74
RD3L-201ENST00000557640 MOB2Q70IA6 237 aa10.42□□□□□ -0.74
RD3L-201ENST00000557640 DDX46Q7L014 1031 aaKnown RBP10.42□□□□□ -0.74
RD3L-201ENST00000557640 DPF2Q92785 391 aa10.42□□□□□ -0.74
RD3L-201ENST00000557640 CDCA5Q96FF9 252 aa10.42□□□□□ -0.74
RD3L-201ENST00000557640 CSRNP1Q96S65 589 aa10.42□□□□□ -0.74
RD3L-201ENST00000557640 CHPF2Q9P2E5 772 aa10.42□□□□□ -0.74
RD3L-201ENST00000557640 H7C1D1 291 aa10.41□□□□□ -0.74
RD3L-201ENST00000557640 CAPN5O15484 640 aaPredicted RBP10.41□□□□□ -0.74
RD3L-201ENST00000557640 DXOO77932 396 aaKnown RBP10.41□□□□□ -0.74
RD3L-201ENST00000557640 ZNF157P51786 506 aaPredicted RBP10.41□□□□□ -0.74
RD3L-201ENST00000557640 RTL5Q5HYW3 569 aaPredicted RBP10.41□□□□□ -0.74
RD3L-201ENST00000557640 FAM89AQ96GI7 184 aa10.41□□□□□ -0.74
RD3L-201ENST00000557640 ISCA1Q9BUE6 129 aa10.41□□□□□ -0.74
RD3L-201ENST00000557640 TSHZ2Q9NRE2 1034 aa10.41□□□□□ -0.74
RD3L-201ENST00000557640 ZSWIM8A7E2V4 1837 aa10.41□□□□□ -0.74
RD3L-201ENST00000557640 WTIPA6NIX2 430 aaPredicted RBP10.4□□□□□ -0.74
RD3L-201ENST00000557640 ATP5J2-PTCD1G3V325 749 aa10.4□□□□□ -0.74
RD3L-201ENST00000557640 H3BM21 787 aa10.4□□□□□ -0.74
RD3L-201ENST00000557640 WASHC4Q2M389 1173 aa10.4□□□□□ -0.74
RD3L-201ENST00000557640 TBC1D16Q8TBP0 767 aa10.4□□□□□ -0.74
RD3L-201ENST00000557640 SEC31BQ9NQW1 1179 aa10.4□□□□□ -0.74
RD3L-201ENST00000557640 NSFL1CQ9UNZ2 370 aaKnown RBP10.4□□□□□ -0.74
RD3L-201ENST00000557640 SSC5DA1L4H1 1573 aa10.39□□□□□ -0.75
RD3L-201ENST00000557640 SUZ12Q15022 739 aaKnown RBP10.39□□□□□ -0.75
RD3L-201ENST00000557640 SF3B3Q15393 1217 aaKnown RBP10.39□□□□□ -0.75
RD3L-201ENST00000557640 ANGEL2Q5VTE6 544 aaKnown RBP10.39□□□□□ -0.75
RD3L-201ENST00000557640 PRPF38BQ5VTL8 546 aaKnown RBP10.39□□□□□ -0.75
RD3L-201ENST00000557640 TRIM46Q7Z4K8 759 aa10.39□□□□□ -0.75
RD3L-201ENST00000557640 CTU1Q7Z7A3 348 aaKnown RBP10.39□□□□□ -0.75
RD3L-201ENST00000557640 PHOX2BQ99453 314 aa10.39□□□□□ -0.75
RD3L-201ENST00000557640 WASF2Q9Y6W5 498 aa10.39□□□□□ -0.75
RD3L-201ENST00000557640 MAPK8IP3Q9UPT6 1336 aa10.38□□□□□ -0.75
RD3L-201ENST00000557640 C6orf229H3BNL8 230 aa10.38□□□□□ -0.75
RD3L-201ENST00000557640 VIL1P09327 827 aaKnown RBP10.38□□□□□ -0.75
RD3L-201ENST00000557640 RPS12P25398 132 aaKnown RBP10.38□□□□□ -0.75
RD3L-201ENST00000557640 ZNF280AP59817 542 aaPredicted RBP10.38□□□□□ -0.75
RD3L-201ENST00000557640 HSP90AB3PQ58FF7 597 aa10.38□□□□□ -0.75
RD3L-201ENST00000557640 PRAMEF18Q5VWM3 479 aa10.38□□□□□ -0.75
RD3L-201ENST00000557640 C2orf69Q8N8R5 385 aa10.38□□□□□ -0.75
RD3L-201ENST00000557640 DCPSQ96C86 337 aaKnown RBP10.38□□□□□ -0.75
RD3L-201ENST00000557640 GMLQ99445 158 aa10.38□□□□□ -0.75
RD3L-201ENST00000557640 TMX4Q9H1E5 349 aaPredicted RBP10.38□□□□□ -0.75
RD3L-201ENST00000557640 R3HDMLQ9H3Y0 253 aa10.38□□□□□ -0.75
RD3L-201ENST00000557640 SZT2Q5T011 3432 aa10.37□□□□□ -0.75
RD3L-201ENST00000557640 UFL1O94874 794 aa10.37□□□□□ -0.75
RD3L-201ENST00000557640 TMPOP42166 694 aaKnown RBP10.37□□□□□ -0.75
RD3L-201ENST00000557640 RIPK4P57078 832 aa10.37□□□□□ -0.75
RD3L-201ENST00000557640 TMC4Q7Z404 712 aa10.37□□□□□ -0.75
RD3L-201ENST00000557640 PLBD2Q8NHP8 589 aa10.37□□□□□ -0.75
RD3L-201ENST00000557640 ZNF296Q8WUU4 475 aaPredicted RBP10.37□□□□□ -0.75
RD3L-201ENST00000557640 CCDC102AQ96A19 550 aa10.37□□□□□ -0.75
RD3L-201ENST00000557640 MXD3Q9BW11 206 aa10.37□□□□□ -0.75
RD3L-201ENST00000557640 ARAP2Q8WZ64 1704 aa10.36□□□□□ -0.75
RD3L-201ENST00000557640 KIAA0100Q14667 2235 aaKnown RBP10.36□□□□□ -0.75
RD3L-201ENST00000557640 TBC1D8O95759 1140 aa10.36□□□□□ -0.75
RD3L-201ENST00000557640 SCARF1Q14162 830 aa10.36□□□□□ -0.75
RD3L-201ENST00000557640 CCDC146Q8IYE0 955 aa10.36□□□□□ -0.75
RD3L-201ENST00000557640 JARID2Q92833 1246 aaPredicted RBP10.36□□□□□ -0.75
RD3L-201ENST00000557640 PODXL2Q9NZ53 605 aa10.36□□□□□ -0.75
RD3L-201ENST00000557640 UBE2Q2LH0YL09 131 aa10.35□□□□□ -0.75
RD3L-201ENST00000557640 CHL1O00533 1208 aa10.35□□□□□ -0.75
RD3L-201ENST00000557640 IRS4O14654 1257 aaPredicted RBP10.35□□□□□ -0.75
RD3L-201ENST00000557640 HDGFL1Q5TGJ6 251 aa10.35□□□□□ -0.75
RD3L-201ENST00000557640 SMYD5Q6GMV2 418 aa10.35□□□□□ -0.75
RD3L-201ENST00000557640 RSBN1LQ6PCB5 846 aaPredicted RBP10.35□□□□□ -0.75
RD3L-201ENST00000557640 EHBP1Q8NDI1 1231 aa10.35□□□□□ -0.75
RD3L-201ENST00000557640 CCDC85AQ96PX6 553 aaPredicted RBP10.35□□□□□ -0.75
RD3L-201ENST00000557640 FZD1Q9UP38 647 aa10.35□□□□□ -0.75
RD3L-201ENST00000557640 NEFMP07197 916 aa10.34□□□□□ -0.75
RD3L-201ENST00000557640 RPS8P62241 208 aaKnown RBP10.34□□□□□ -0.75
RD3L-201ENST00000557640 CAP1Q01518 475 aa10.34□□□□□ -0.75
RD3L-201ENST00000557640 NBPF9Q3BBW0 867 aa10.34□□□□□ -0.75
RD3L-201ENST00000557640 MYOZ2Q9NPC6 264 aa10.34□□□□□ -0.75
RD3L-201ENST00000557640 BABAM1Q9NWV8 329 aa10.34□□□□□ -0.75
RD3L-201ENST00000557640 PITPNM2Q9BZ72 1349 aa10.33□□□□□ -0.76
RD3L-201ENST00000557640 KDM4AO75164 1064 aa10.33□□□□□ -0.76
RD3L-201ENST00000557640 KLRK1P26718 216 aa10.33□□□□□ -0.76
RD3L-201ENST00000557640 EYA3Q99504 573 aa10.33□□□□□ -0.76
RD3L-201ENST00000557640 PHAXQ9H814 394 aaKnown RBP10.33□□□□□ -0.76
RD3L-201ENST00000557640 AOX1Q06278 1338 aa10.33□□□□□ -0.76
RD3L-201ENST00000557640 MED23Q9ULK4 1368 aa10.32□□□□□ -0.76
RD3L-201ENST00000557640 SIAH2O43255 324 aa10.32□□□□□ -0.76
RD3L-201ENST00000557640 SASH1O94885 1247 aa10.32□□□□□ -0.76
RD3L-201ENST00000557640 NEUROD2Q15784 382 aa10.32□□□□□ -0.76
RD3L-201ENST00000557640 TXNRD3Q86VQ6 643 aa10.32□□□□□ -0.76
RD3L-201ENST00000557640 AGBL3Q8NEM8 1001 aa10.32□□□□□ -0.76
RD3L-201ENST00000557640 ZFP42Q96MM3 310 aa10.32□□□□□ -0.76
RD3L-201ENST00000557640 GGA1Q9UJY5 639 aa10.32□□□□□ -0.76
RD3L-201ENST00000557640 RANBP2P49792 3224 aaKnown RBP10.31□□□□□ -0.76
RD3L-201ENST00000557640 GPR25O00155 361 aa10.31□□□□□ -0.76
RD3L-201ENST00000557640 USP17L8P0C7I0 530 aa10.31□□□□□ -0.76
RD3L-201ENST00000557640 FKBP1BP68106 108 aa10.31□□□□□ -0.76
RD3L-201ENST00000557640 TRIM28Q13263 835 aaKnown RBP10.31□□□□□ -0.76
RD3L-201ENST00000557640 DACT2Q5SW24 774 aa10.31□□□□□ -0.76
RD3L-201ENST00000557640 ZBTB38Q8NAP3 1195 aaPredicted RBP10.31□□□□□ -0.76
RD3L-201ENST00000557640 ZC3H12CQ9C0D7 883 aaKnown RBP10.31□□□□□ -0.76
RD3L-201ENST00000557640 MBIPQ9NS73 344 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms