RNA–Protein interactions for RNA: ENST00000557294.5

PRKCH-223, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-223ENST00000557294 SOX1O00570 391 aaPredicted RBP23.27■■□□□ 1.32
PRKCH-223ENST00000557294 FARP2O94887 1054 aaPredicted RBP23.27■■□□□ 1.32
PRKCH-223ENST00000557294 CAPN2P17655 700 aa23.27■■□□□ 1.32
PRKCH-223ENST00000557294 KCNH4Q9UQ05 1017 aa23.27■■□□□ 1.32
PRKCH-223ENST00000557294 CCDC27Q2M243 656 aa23.26■■□□□ 1.31
PRKCH-223ENST00000557294 APOBEC3HQ6NTF7 200 aaKnown RBP23.26■■□□□ 1.31
PRKCH-223ENST00000557294 MIGA2Q7L4E1 593 aa23.26■■□□□ 1.31
PRKCH-223ENST00000557294 SLAIN1Q8ND83 568 aa23.26■■□□□ 1.31
PRKCH-223ENST00000557294 LAMA3Q16787 3333 aa23.25■■□□□ 1.31
PRKCH-223ENST00000557294 EVI5O60447 810 aa23.25■■□□□ 1.31
PRKCH-223ENST00000557294 INPP5BP32019 993 aa23.25■■□□□ 1.31
PRKCH-223ENST00000557294 FCGRTP55899 365 aa23.25■■□□□ 1.31
PRKCH-223ENST00000557294 PRKCZQ05513 592 aa23.25■■□□□ 1.31
PRKCH-223ENST00000557294 MOGSQ13724 837 aa23.25■■□□□ 1.31
PRKCH-223ENST00000557294 VPS37DQ86XT2 251 aa23.25■■□□□ 1.31
PRKCH-223ENST00000557294 PUS3Q9BZE2 481 aaKnown RBP23.25■■□□□ 1.31
PRKCH-223ENST00000557294 UNC93B1Q9H1C4 597 aa23.25■■□□□ 1.31
PRKCH-223ENST00000557294 PRKRIP1Q9H875 184 aaPredicted RBP23.25■■□□□ 1.31
PRKCH-223ENST00000557294 ZNF112Q9UJU3 913 aa23.25■■□□□ 1.31
PRKCH-223ENST00000557294 GRM8O00222 908 aa23.24■■□□□ 1.31
PRKCH-223ENST00000557294 BCRP11274 1271 aa23.24■■□□□ 1.31
PRKCH-223ENST00000557294 MNX1P50219 401 aaPredicted RBP23.24■■□□□ 1.31
PRKCH-223ENST00000557294 CHAF1AQ13111 956 aaPredicted RBP23.24■■□□□ 1.31
PRKCH-223ENST00000557294 WWC1Q8IX03 1113 aa23.24■■□□□ 1.31
PRKCH-223ENST00000557294 LRCH3Q96II8 777 aa23.24■■□□□ 1.31
PRKCH-223ENST00000557294 IQSEC3Q9UPP2 1182 aaPredicted RBP23.24■■□□□ 1.31
PRKCH-223ENST00000557294 F6X3S4 739 aa23.23■■□□□ 1.31
PRKCH-223ENST00000557294 HHIPL2Q6UWX4 724 aa23.23■■□□□ 1.31
PRKCH-223ENST00000557294 STAP2Q9UGK3 403 aa23.23■■□□□ 1.31
PRKCH-223ENST00000557294 VAMP4O75379 141 aa23.22■■□□□ 1.31
PRKCH-223ENST00000557294 FRAT2O75474 233 aaPredicted RBP23.22■■□□□ 1.31
PRKCH-223ENST00000557294 CAVIN4Q5BKX8 364 aa23.22■■□□□ 1.31
PRKCH-223ENST00000557294 PARK7Q99497 189 aaKnown RBP23.22■■□□□ 1.31
PRKCH-223ENST00000557294 GABRQQ9UN88 632 aa23.22■■□□□ 1.31
PRKCH-223ENST00000557294 SUGT1Q9Y2Z0 365 aa23.22■■□□□ 1.31
PRKCH-223ENST00000557294 MROH5Q6ZUA9 1318 aa23.22■■□□□ 1.31
PRKCH-223ENST00000557294 RPAP1Q9BWH6 1393 aaPredicted RBP23.22■■□□□ 1.31
PRKCH-223ENST00000557294 TFRCP02786 760 aaKnown RBP23.21■■□□□ 1.31
PRKCH-223ENST00000557294 FAM151AQ8WW52 585 aa23.21■■□□□ 1.31
PRKCH-223ENST00000557294 C9orf78Q9NZ63 289 aaPredicted RBP23.21■■□□□ 1.31
PRKCH-223ENST00000557294 IL16Q14005 1332 aa23.21■■□□□ 1.31
PRKCH-223ENST00000557294 CXCL11O14625 94 aa23.2■■□□□ 1.3
PRKCH-223ENST00000557294 ADCY3O60266 1144 aa23.2■■□□□ 1.3
PRKCH-223ENST00000557294 GPAT2Q6NUI2 795 aa23.2■■□□□ 1.3
PRKCH-223ENST00000557294 GPR153Q6NV75 609 aa23.2■■□□□ 1.3
PRKCH-223ENST00000557294 PXYLP1Q8TE99 480 aa23.2■■□□□ 1.3
PRKCH-223ENST00000557294 MAST3O60307 1309 aa23.19■■□□□ 1.3
PRKCH-223ENST00000557294 CYP2C8P10632 490 aa23.19■■□□□ 1.3
PRKCH-223ENST00000557294 BMP8BP34820 402 aa23.18■■□□□ 1.3
PRKCH-223ENST00000557294 FLT3LGP49771 235 aa23.18■■□□□ 1.3
PRKCH-223ENST00000557294 NOL9Q5SY16 702 aaKnown RBP23.18■■□□□ 1.3
PRKCH-223ENST00000557294 DEFB118Q96PH6 123 aa23.18■■□□□ 1.3
PRKCH-223ENST00000557294 ALDH1L1O75891 902 aa23.17■■□□□ 1.3
PRKCH-223ENST00000557294 PDE8BO95263 885 aa23.16■■□□□ 1.3
PRKCH-223ENST00000557294 INHAP05111 366 aa23.16■■□□□ 1.3
PRKCH-223ENST00000557294 BCAMP50895 628 aa23.16■■□□□ 1.3
PRKCH-223ENST00000557294 IRF5Q13568 498 aa23.16■■□□□ 1.3
PRKCH-223ENST00000557294 FASTKD5Q7L8L6 764 aaKnown RBP23.16■■□□□ 1.3
PRKCH-223ENST00000557294 KAZALD1Q96I82 304 aa23.16■■□□□ 1.3
PRKCH-223ENST00000557294 GDF15Q99988 308 aa23.16■■□□□ 1.3
PRKCH-223ENST00000557294 CRISPLD2Q9H0B8 497 aa23.16■■□□□ 1.3
PRKCH-223ENST00000557294 PAK6Q9NQU5 681 aaPredicted RBP23.16■■□□□ 1.3
PRKCH-223ENST00000557294 ELNP15502 786 aa23.15■■□□□ 1.3
PRKCH-223ENST00000557294 NCBP3Q53F19 620 aaKnown RBP23.15■■□□□ 1.3
PRKCH-223ENST00000557294 PAWRQ96IZ0 340 aaKnown RBP23.15■■□□□ 1.3
PRKCH-223ENST00000557294 CACNA1FO60840 1977 aa23.14■■□□□ 1.3
PRKCH-223ENST00000557294 FANCIQ9NVI1 1328 aa23.14■■□□□ 1.3
PRKCH-223ENST00000557294 TCP10Q12799 353 aa23.14■■□□□ 1.29
PRKCH-223ENST00000557294 METTL24Q5JXM2 366 aa23.14■■□□□ 1.29
PRKCH-223ENST00000557294 SUCLG2Q96I99 432 aa23.14■■□□□ 1.29
PRKCH-223ENST00000557294 LRRC24Q50LG9 513 aa23.13■■□□□ 1.29
PRKCH-223ENST00000557294 NECAB2Q7Z6G3 386 aa23.13■■□□□ 1.29
PRKCH-223ENST00000557294 DEFB123Q8N688 67 aa23.13■■□□□ 1.29
PRKCH-223ENST00000557294 VGLL2Q8N8G2 317 aa23.13■■□□□ 1.29
PRKCH-223ENST00000557294 SLC45A1Q9Y2W3 748 aa23.13■■□□□ 1.29
PRKCH-223ENST00000557294 CUL9Q8IWT3 2517 aa23.13■■□□□ 1.29
PRKCH-223ENST00000557294 A0A0G2JLL6 359 aaPredicted RBP23.12■■□□□ 1.29
PRKCH-223ENST00000557294 TNPO2O14787 897 aaKnown RBP23.12■■□□□ 1.29
PRKCH-223ENST00000557294 CDC42EP5Q6NZY7 148 aa23.12■■□□□ 1.29
PRKCH-223ENST00000557294 PRRT2Q7Z6L0 340 aaPredicted RBP23.12■■□□□ 1.29
PRKCH-223ENST00000557294 SRCIN1Q9C0H9 1055 aa23.12■■□□□ 1.29
PRKCH-223ENST00000557294 STXBP5LQ9Y2K9 1186 aa23.12■■□□□ 1.29
PRKCH-223ENST00000557294 ZHX2Q9Y6X8 837 aa23.12■■□□□ 1.29
PRKCH-223ENST00000557294 EXOSC9Q06265 439 aaKnown RBP23.11■■□□□ 1.29
PRKCH-223ENST00000557294 NFIAQ12857 509 aa23.11■■□□□ 1.29
PRKCH-223ENST00000557294 WDR66Q8TBY9 1149 aa23.11■■□□□ 1.29
PRKCH-223ENST00000557294 KIF16BQ96L93 1317 aa23.1■■□□□ 1.29
PRKCH-223ENST00000557294 PHF20L1A8MW92 1017 aa23.1■■□□□ 1.29
PRKCH-223ENST00000557294 NBPF7P0C2Y1 421 aaPredicted RBP23.1■■□□□ 1.29
PRKCH-223ENST00000557294 LRIT3Q3SXY7 679 aa23.1■■□□□ 1.29
PRKCH-223ENST00000557294 RABL6Q3YEC7 729 aaPredicted RBP23.1■■□□□ 1.29
PRKCH-223ENST00000557294 DAGLAQ9Y4D2 1042 aa23.1■■□□□ 1.29
PRKCH-223ENST00000557294 AFG3L2Q9Y4W6 797 aa23.1■■□□□ 1.29
PRKCH-223ENST00000557294 SLC4A10Q6U841 1118 aa23.09■■□□□ 1.29
PRKCH-223ENST00000557294 ANKLE1Q8NAG6 615 aa23.09■■□□□ 1.29
PRKCH-223ENST00000557294 FAM198AQ9UFP1 575 aa23.09■■□□□ 1.29
PRKCH-223ENST00000557294 UTYO14607 1347 aa23.08■■□□□ 1.29
PRKCH-223ENST00000557294 IFIT1P09914 478 aaKnown RBP23.08■■□□□ 1.29
PRKCH-223ENST00000557294 PTPRAP18433 802 aa23.08■■□□□ 1.29
PRKCH-223ENST00000557294 SCYL3Q8IZE3 742 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms