RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 DEPDC4Q8N2C3 294 aa12.48□□□□□ -0.41
HNRNPC-228ENST00000557033 FAM174AQ8TBP5 190 aa12.48□□□□□ -0.41
HNRNPC-228ENST00000557033 FAM200AQ8TCP9 573 aa12.48□□□□□ -0.41
HNRNPC-228ENST00000557033 JARID2Q92833 1246 aaPredicted RBP12.48□□□□□ -0.41
HNRNPC-228ENST00000557033 KCNK17Q96T54 332 aa12.48□□□□□ -0.41
HNRNPC-228ENST00000557033 SEC31BQ9NQW1 1179 aa12.48□□□□□ -0.41
HNRNPC-228ENST00000557033 GPRC5DQ9NZD1 345 aa12.48□□□□□ -0.41
HNRNPC-228ENST00000557033 POLLQ9UGP5 575 aa12.48□□□□□ -0.41
HNRNPC-228ENST00000557033 EPS15P42566 896 aa12.47□□□□□ -0.41
HNRNPC-228ENST00000557033 GCKRQ14397 625 aa12.47□□□□□ -0.41
HNRNPC-228ENST00000557033 CWF19L2Q2TBE0 894 aaKnown RBP12.47□□□□□ -0.41
HNRNPC-228ENST00000557033 ANKRD18AQ8IVF6 992 aa12.47□□□□□ -0.41
HNRNPC-228ENST00000557033 LINS1Q8NG48 757 aa12.47□□□□□ -0.41
HNRNPC-228ENST00000557033 TTLL11Q8NHH1 800 aa12.47□□□□□ -0.41
HNRNPC-228ENST00000557033 TBC1D16Q8TBP0 767 aa12.47□□□□□ -0.41
HNRNPC-228ENST00000557033 DNAAF4Q8WXU2 420 aa12.47□□□□□ -0.41
HNRNPC-228ENST00000557033 CDC5LQ99459 802 aaKnown RBP12.47□□□□□ -0.41
HNRNPC-228ENST00000557033 ZC3H12CQ9C0D7 883 aaKnown RBP12.47□□□□□ -0.41
HNRNPC-228ENST00000557033 ADARB2Q9NS39 739 aaKnown RBP12.47□□□□□ -0.41
HNRNPC-228ENST00000557033 ADAMTSL1Q8N6G6 1762 aa12.47□□□□□ -0.41
HNRNPC-228ENST00000557033 ZNF521Q96K83 1311 aa12.46□□□□□ -0.41
HNRNPC-228ENST00000557033 RAD17O75943 681 aa12.46□□□□□ -0.41
HNRNPC-228ENST00000557033 CTSWP56202 376 aa12.46□□□□□ -0.41
HNRNPC-228ENST00000557033 PLA2G12BQ9BX93 195 aa12.46□□□□□ -0.41
HNRNPC-228ENST00000557033 ANKIB1Q9P2G1 1089 aa12.46□□□□□ -0.41
HNRNPC-228ENST00000557033 FKBPLQ9UIM3 349 aa12.46□□□□□ -0.41
HNRNPC-228ENST00000557033 DUOX1Q9NRD9 1551 aa12.46□□□□□ -0.42
HNRNPC-228ENST00000557033 RTL9Q8NET4 1388 aa12.45□□□□□ -0.42
HNRNPC-228ENST00000557033 YDJCA8MPS7 323 aa12.45□□□□□ -0.42
HNRNPC-228ENST00000557033 RASA1P20936 1047 aa12.45□□□□□ -0.42
HNRNPC-228ENST00000557033 GMPSP49915 693 aaPredicted RBP12.45□□□□□ -0.42
HNRNPC-228ENST00000557033 MAP1SQ66K74 1059 aaPredicted RBP12.45□□□□□ -0.42
HNRNPC-228ENST00000557033 DPF2Q92785 391 aa12.45□□□□□ -0.42
HNRNPC-228ENST00000557033 CCDC85AQ96PX6 553 aaPredicted RBP12.45□□□□□ -0.42
HNRNPC-228ENST00000557033 BCL2L13Q9BXK5 485 aa12.45□□□□□ -0.42
HNRNPC-228ENST00000557033 RABGEF1Q9UJ41 708 aa12.45□□□□□ -0.42
HNRNPC-228ENST00000557033 GGA1Q9UJY5 639 aa12.45□□□□□ -0.42
HNRNPC-228ENST00000557033 CSF1RP07333 972 aa12.44□□□□□ -0.42
HNRNPC-228ENST00000557033 ATP2B4P23634 1241 aa12.44□□□□□ -0.42
HNRNPC-228ENST00000557033 SERPINB4P48594 390 aa12.44□□□□□ -0.42
HNRNPC-228ENST00000557033 MARSP56192 900 aaKnown RBP12.44□□□□□ -0.42
HNRNPC-228ENST00000557033 UBE3BQ7Z3V4 1068 aa12.44□□□□□ -0.42
HNRNPC-228ENST00000557033 GREM2Q9H772 168 aa12.44□□□□□ -0.42
HNRNPC-228ENST00000557033 BSDC1Q9NW68 430 aaPredicted RBP12.44□□□□□ -0.42
HNRNPC-228ENST00000557033 PGAP2Q9UHJ9 254 aa12.44□□□□□ -0.42
HNRNPC-228ENST00000557033 CNOT7Q9UIV1 285 aaKnown RBP12.44□□□□□ -0.42
HNRNPC-228ENST00000557033 LTBP1Q14766 1721 aa12.44□□□□□ -0.42
HNRNPC-228ENST00000557033 XDHP47989 1333 aa12.43□□□□□ -0.42
HNRNPC-228ENST00000557033 COL4A1P02462 1669 aa12.43□□□□□ -0.42
HNRNPC-228ENST00000557033 H7C1D1 291 aa12.43□□□□□ -0.42
HNRNPC-228ENST00000557033 UFL1O94874 794 aa12.43□□□□□ -0.42
HNRNPC-228ENST00000557033 RPS12P25398 132 aaKnown RBP12.43□□□□□ -0.42
HNRNPC-228ENST00000557033 CASP7P55210 303 aa12.43□□□□□ -0.42
HNRNPC-228ENST00000557033 MORN1Q5T089 497 aa12.43□□□□□ -0.42
HNRNPC-228ENST00000557033 BEND3Q5T5X7 828 aa12.43□□□□□ -0.42
HNRNPC-228ENST00000557033 DBNDD1Q9H9R9 158 aa12.43□□□□□ -0.42
HNRNPC-228ENST00000557033 CEP126Q9P2H0 1117 aa12.43□□□□□ -0.42
HNRNPC-228ENST00000557033 SEPT9Q9UHD8 586 aaPredicted RBP12.43□□□□□ -0.42
HNRNPC-228ENST00000557033 MYH3P11055 1940 aa12.43□□□□□ -0.42
HNRNPC-228ENST00000557033 CCER2I3L3R5 266 aa12.42□□□□□ -0.42
HNRNPC-228ENST00000557033 LZTS3O60299 673 aaPredicted RBP12.42□□□□□ -0.42
HNRNPC-228ENST00000557033 ECE2O60344 883 aa12.42□□□□□ -0.42
HNRNPC-228ENST00000557033 IGHMBP2P38935 993 aaKnown RBP12.42□□□□□ -0.42
HNRNPC-228ENST00000557033 Q3C1V9 767 aa12.42□□□□□ -0.42
HNRNPC-228ENST00000557033 ANKMY2Q8IV38 441 aa12.42□□□□□ -0.42
HNRNPC-228ENST00000557033 MINPP1Q9UNW1 487 aa12.42□□□□□ -0.42
HNRNPC-228ENST00000557033 PSMD14O00487 310 aa12.41□□□□□ -0.42
HNRNPC-228ENST00000557033 VIL1P09327 827 aaKnown RBP12.41□□□□□ -0.42
HNRNPC-228ENST00000557033 NCOA4Q13772 614 aa12.41□□□□□ -0.42
HNRNPC-228ENST00000557033 PODNQ7Z5L7 613 aa12.41□□□□□ -0.42
HNRNPC-228ENST00000557033 PHTF2Q8N3S3 785 aa12.41□□□□□ -0.42
HNRNPC-228ENST00000557033 SLC27A5Q9Y2P5 690 aa12.41□□□□□ -0.42
HNRNPC-228ENST00000557033 F6X3S4 739 aa12.4□□□□□ -0.42
HNRNPC-228ENST00000557033 ALDH1L1O75891 902 aa12.4□□□□□ -0.42
HNRNPC-228ENST00000557033 ITGA6P23229 1130 aa12.4□□□□□ -0.42
HNRNPC-228ENST00000557033 HIRAP54198 1017 aaPredicted RBP12.4□□□□□ -0.42
HNRNPC-228ENST00000557033 SLFN5Q08AF3 891 aa12.4□□□□□ -0.42
HNRNPC-228ENST00000557033 DEFB115Q30KQ5 88 aa12.4□□□□□ -0.42
HNRNPC-228ENST00000557033 GPR101Q96P66 508 aaPredicted RBP12.4□□□□□ -0.42
HNRNPC-228ENST00000557033 MPHOSPH8Q99549 860 aa12.4□□□□□ -0.42
HNRNPC-228ENST00000557033 ANKRD2Q9GZV1 360 aa12.4□□□□□ -0.42
HNRNPC-228ENST00000557033 KCNQ5Q9NR82 932 aa12.4□□□□□ -0.42
HNRNPC-228ENST00000557033 LEMD3Q9Y2U8 911 aa12.4□□□□□ -0.42
HNRNPC-228ENST00000557033 CNTNAP1P78357 1384 aa12.4□□□□□ -0.42
HNRNPC-228ENST00000557033 ANKRD18BA2A2Z9 1011 aa12.39□□□□□ -0.43
HNRNPC-228ENST00000557033 RASSF10A6NK89 507 aa12.39□□□□□ -0.43
HNRNPC-228ENST00000557033 GRM8O00222 908 aa12.39□□□□□ -0.43
HNRNPC-228ENST00000557033 F12P00748 615 aaPredicted RBP12.39□□□□□ -0.43
HNRNPC-228ENST00000557033 HMGB1P09429 215 aaKnown RBP12.39□□□□□ -0.43
HNRNPC-228ENST00000557033 CCT4P50991 539 aaKnown RBP12.39□□□□□ -0.43
HNRNPC-228ENST00000557033 FOXO4P98177 505 aa12.39□□□□□ -0.43
HNRNPC-228ENST00000557033 SLFNL1Q499Z3 407 aa12.39□□□□□ -0.43
HNRNPC-228ENST00000557033 CDC37L1Q7L3B6 337 aa12.39□□□□□ -0.43
HNRNPC-228ENST00000557033 SAMD7Q7Z3H4 446 aa12.39□□□□□ -0.43
HNRNPC-228ENST00000557033 GIPC2Q8TF65 315 aa12.39□□□□□ -0.43
HNRNPC-228ENST00000557033 IFIT5Q13325 482 aaKnown RBP12.38□□□□□ -0.43
HNRNPC-228ENST00000557033 SWI5Q1ZZU3 235 aa12.38□□□□□ -0.43
HNRNPC-228ENST00000557033 KMT5BQ4FZB7 885 aa12.38□□□□□ -0.43
HNRNPC-228ENST00000557033 CST9Q5W186 159 aa12.38□□□□□ -0.43
HNRNPC-228ENST00000557033 MRPL50Q8N5N7 158 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms