RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 ARMC9Q7Z3E5 817 aa27.96■■■□□ 2.07
TDP1-216ENST00000556867 NSUN4Q96CB9 384 aaKnown RBP27.96■■■□□ 2.07
TDP1-216ENST00000556867 TEPSINQ96N21 525 aa27.96■■■□□ 2.07
TDP1-216ENST00000556867 LRP2BPQ9P2M1 347 aa27.96■■■□□ 2.07
TDP1-216ENST00000556867 IGSF3O75054 1194 aa27.95■■■□□ 2.06
TDP1-216ENST00000556867 TMEM39BQ9GZU3 492 aa27.95■■■□□ 2.06
TDP1-216ENST00000556867 RAI14Q9P0K7 980 aa27.95■■■□□ 2.06
TDP1-216ENST00000556867 RPAP1Q9BWH6 1393 aaPredicted RBP27.95■■■□□ 2.06
TDP1-216ENST00000556867 UBE2Q2LH0YL09 131 aa27.94■■■□□ 2.06
TDP1-216ENST00000556867 MAP2K2P36507 400 aa27.94■■■□□ 2.06
TDP1-216ENST00000556867 ZNF157P51786 506 aaPredicted RBP27.94■■■□□ 2.06
TDP1-216ENST00000556867 GSTO1P78417 241 aa27.94■■■□□ 2.06
TDP1-216ENST00000556867 AAMPQ13685 434 aa27.94■■■□□ 2.06
TDP1-216ENST00000556867 CCDC102AQ96A19 550 aa27.94■■■□□ 2.06
TDP1-216ENST00000556867 FAM155AB1AL88 458 aaPredicted RBP27.93■■■□□ 2.06
TDP1-216ENST00000556867 NOGQ13253 232 aa27.93■■■□□ 2.06
TDP1-216ENST00000556867 MAP3K11Q16584 847 aa27.93■■■□□ 2.06
TDP1-216ENST00000556867 USP40Q9NVE5 1235 aa27.93■■■□□ 2.06
TDP1-216ENST00000556867 DOCK2Q92608 1830 aa27.92■■■□□ 2.06
TDP1-216ENST00000556867 RFX7Q2KHR2 1363 aa27.92■■■□□ 2.06
TDP1-216ENST00000556867 GPR75-ASB3A0A0A6YYF3 556 aa27.92■■■□□ 2.06
TDP1-216ENST00000556867 PPP1R12BO60237 982 aaPredicted RBP27.92■■■□□ 2.06
TDP1-216ENST00000556867 AOC2O75106 756 aa27.92■■■□□ 2.06
TDP1-216ENST00000556867 LDHCP07864 332 aa27.92■■■□□ 2.06
TDP1-216ENST00000556867 SLC10A3P09131 477 aa27.92■■■□□ 2.06
TDP1-216ENST00000556867 PRKG1Q13976 671 aa27.92■■■□□ 2.06
TDP1-216ENST00000556867 CDAN1Q8IWY9 1227 aa27.92■■■□□ 2.06
TDP1-216ENST00000556867 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.92■■■□□ 2.06
TDP1-216ENST00000556867 PIH1D3Q9NQM4 214 aaKnown RBP27.92■■■□□ 2.06
TDP1-216ENST00000556867 ANGEL1Q9UNK9 670 aaKnown RBP27.92■■■□□ 2.06
TDP1-216ENST00000556867 SUPT16HQ9Y5B9 1047 aaKnown RBP27.92■■■□□ 2.06
TDP1-216ENST00000556867 HSPA1AP0DMV8 641 aaKnown RBP27.91■■■□□ 2.06
TDP1-216ENST00000556867 HSPA1BP0DMV9 641 aaKnown RBP27.91■■■□□ 2.06
TDP1-216ENST00000556867 BTDP43251 543 aa27.91■■■□□ 2.06
TDP1-216ENST00000556867 LDLRAD1Q5T700 205 aa27.91■■■□□ 2.06
TDP1-216ENST00000556867 MAP2K1Q02750 393 aaPredicted RBP27.9■■■□□ 2.06
TDP1-216ENST00000556867 NFIAQ12857 509 aa27.9■■■□□ 2.06
TDP1-216ENST00000556867 RASAL3Q86YV0 1011 aa27.9■■■□□ 2.06
TDP1-216ENST00000556867 FAM151AQ8WW52 585 aa27.9■■■□□ 2.06
TDP1-216ENST00000556867 FZD1Q9UP38 647 aa27.9■■■□□ 2.06
TDP1-216ENST00000556867 SMARCA5O60264 1052 aaPredicted RBP27.89■■■□□ 2.06
TDP1-216ENST00000556867 IDI2Q9BXS1 227 aa27.89■■■□□ 2.06
TDP1-216ENST00000556867 WBP1LQ9NX94 342 aa27.89■■■□□ 2.06
TDP1-216ENST00000556867 FAM198AQ9UFP1 575 aa27.89■■■□□ 2.06
TDP1-216ENST00000556867 OTOFQ9HC10 1997 aa27.89■■■□□ 2.06
TDP1-216ENST00000556867 NAA16Q6N069 864 aaPredicted RBP27.88■■■□□ 2.05
TDP1-216ENST00000556867 BCL11AQ9H165 835 aa27.88■■■□□ 2.05
TDP1-216ENST00000556867 NDUFB9Q9Y6M9 179 aa27.88■■■□□ 2.05
TDP1-216ENST00000556867 UNCXA6NJT0 531 aa27.87■■■□□ 2.05
TDP1-216ENST00000556867 USP2O75604 605 aaPredicted RBP27.87■■■□□ 2.05
TDP1-216ENST00000556867 MAP4K4O95819 1239 aaPredicted RBP27.87■■■□□ 2.05
TDP1-216ENST00000556867 IREB2P48200 963 aaKnown RBP27.87■■■□□ 2.05
TDP1-216ENST00000556867 RHBDL3P58872 404 aa27.87■■■□□ 2.05
TDP1-216ENST00000556867 HOOK2Q96ED9 719 aa27.87■■■□□ 2.05
TDP1-216ENST00000556867 AK9Q5TCS8 1911 aa27.86■■■□□ 2.05
TDP1-216ENST00000556867 HDAC1Q13547 482 aaPredicted RBP27.86■■■□□ 2.05
TDP1-216ENST00000556867 ANTXR1Q9H6X2 564 aa27.86■■■□□ 2.05
TDP1-216ENST00000556867 ENTPD3O75355 529 aa27.85■■■□□ 2.05
TDP1-216ENST00000556867 WDHD1O75717 1129 aaPredicted RBP27.85■■■□□ 2.05
TDP1-216ENST00000556867 ATP5JP18859 108 aa27.85■■■□□ 2.05
TDP1-216ENST00000556867 RGS3P49796 1198 aa27.85■■■□□ 2.05
TDP1-216ENST00000556867 TCP10Q12799 353 aa27.85■■■□□ 2.05
TDP1-216ENST00000556867 ZIC5Q96T25 663 aa27.85■■■□□ 2.05
TDP1-216ENST00000556867 IDH1O75874 414 aaKnown RBP27.84■■■□□ 2.05
TDP1-216ENST00000556867 TTF1Q15361 905 aaPredicted RBP27.84■■■□□ 2.05
TDP1-216ENST00000556867 TMED8Q6PL24 325 aaPredicted RBP27.84■■■□□ 2.05
TDP1-216ENST00000556867 EXOC6Q8TAG9 804 aa27.84■■■□□ 2.05
TDP1-216ENST00000556867 NPM3O75607 178 aaKnown RBP27.83■■■□□ 2.05
TDP1-216ENST00000556867 AIDAQ96BJ3 306 aa27.83■■■□□ 2.05
TDP1-216ENST00000556867 NOL10Q9BSC4 688 aaKnown RBP27.83■■■□□ 2.05
TDP1-216ENST00000556867 KIF23Q02241 960 aaPredicted RBP27.82■■■□□ 2.04
TDP1-216ENST00000556867 MAP3K12Q12852 859 aa27.82■■■□□ 2.04
TDP1-216ENST00000556867 ADGRA1Q86SQ6 560 aa27.82■■■□□ 2.04
TDP1-216ENST00000556867 ANKRD13AQ8IZ07 590 aa27.82■■■□□ 2.04
TDP1-216ENST00000556867 DNAJC2Q99543 621 aaKnown RBP27.82■■■□□ 2.04
TDP1-216ENST00000556867 DDX4Q9NQI0 724 aaKnown RBP27.82■■■□□ 2.04
TDP1-216ENST00000556867 BAG3O95817 575 aa27.81■■■□□ 2.04
TDP1-216ENST00000556867 PPP4CP60510 307 aa27.81■■■□□ 2.04
TDP1-216ENST00000556867 DCAF15Q66K64 600 aa27.81■■■□□ 2.04
TDP1-216ENST00000556867 ZFPM1Q8IX07 1006 aa27.81■■■□□ 2.04
TDP1-216ENST00000556867 CLMNQ96JQ2 1002 aa27.81■■■□□ 2.04
TDP1-216ENST00000556867 CDK5RAP2Q96SN8 1893 aa27.81■■■□□ 2.04
TDP1-216ENST00000556867 GOLIM4O00461 696 aa27.8■■■□□ 2.04
TDP1-216ENST00000556867 FOXN1O15353 648 aa27.8■■■□□ 2.04
TDP1-216ENST00000556867 PLCG2P16885 1265 aa27.8■■■□□ 2.04
TDP1-216ENST00000556867 CYP7A1P22680 504 aa27.8■■■□□ 2.04
TDP1-216ENST00000556867 MAGEB6Q8N7X4 407 aa27.8■■■□□ 2.04
TDP1-216ENST00000556867 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.8■■■□□ 2.04
TDP1-216ENST00000556867 SLC10A4Q96EP9 437 aa27.8■■■□□ 2.04
TDP1-216ENST00000556867 HAUS7Q99871 368 aa27.8■■■□□ 2.04
TDP1-216ENST00000556867 BOLA2Q9H3K6 86 aa27.8■■■□□ 2.04
TDP1-216ENST00000556867 ECHDC1Q9NTX5 307 aa27.8■■■□□ 2.04
TDP1-216ENST00000556867 AATFQ9NY61 560 aaKnown RBP eCLIP27.8■■■□□ 2.04
TDP1-216ENST00000556867 LAMB1P07942 1786 aa27.8■■■□□ 2.04
TDP1-216ENST00000556867 FOCADQ5VW36 1801 aa27.8■■■□□ 2.04
TDP1-216ENST00000556867 COL2A1P02458 1487 aaPredicted RBP27.79■■■□□ 2.04
TDP1-216ENST00000556867 ATRNL1Q5VV63 1379 aa27.79■■■□□ 2.04
TDP1-216ENST00000556867 REM2Q8IYK8 340 aaPredicted RBP27.79■■■□□ 2.04
TDP1-216ENST00000556867 SH3RF3Q8TEJ3 882 aaPredicted RBP27.79■■■□□ 2.04
TDP1-216ENST00000556867 GCC1Q96CN9 775 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms