RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 ZBED3Q96IU2 234 aaPredicted RBP9.08□□□□□ -0.96
SCFD1-222ENST00000556768 ARID3AQ99856 593 aa9.08□□□□□ -0.96
SCFD1-222ENST00000556768 COPRSQ9NQ92 184 aa9.08□□□□□ -0.96
SCFD1-222ENST00000556768 TMOD2Q9NZR1 351 aa9.08□□□□□ -0.96
SCFD1-222ENST00000556768 SLC10A3P09131 477 aa9.07□□□□□ -0.96
SCFD1-222ENST00000556768 FGFR2P21802 821 aa9.07□□□□□ -0.96
SCFD1-222ENST00000556768 RFX5P48382 616 aaPredicted RBP9.07□□□□□ -0.96
SCFD1-222ENST00000556768 SLC10A4Q96EP9 437 aa9.07□□□□□ -0.96
SCFD1-222ENST00000556768 MRIQ9BWK5 157 aa9.07□□□□□ -0.96
SCFD1-222ENST00000556768 ZBED9Q6R2W3 1325 aa9.06□□□□□ -0.96
SCFD1-222ENST00000556768 UNCXA6NJT0 531 aa9.06□□□□□ -0.96
SCFD1-222ENST00000556768 FAM155AB1AL88 458 aaPredicted RBP9.06□□□□□ -0.96
SCFD1-222ENST00000556768 MS4A1P11836 297 aa9.06□□□□□ -0.96
SCFD1-222ENST00000556768 CRKP46108 304 aa9.06□□□□□ -0.96
SCFD1-222ENST00000556768 IREB2P48200 963 aaKnown RBP9.06□□□□□ -0.96
SCFD1-222ENST00000556768 G3BP1Q13283 466 aaKnown RBP eCLIP9.06□□□□□ -0.96
SCFD1-222ENST00000556768 RASA3Q14644 834 aa9.06□□□□□ -0.96
SCFD1-222ENST00000556768 GORABQ5T7V8 394 aa9.06□□□□□ -0.96
SCFD1-222ENST00000556768 ATG9AQ7Z3C6 839 aa9.06□□□□□ -0.96
SCFD1-222ENST00000556768 ZGPATQ8N5A5 531 aaKnown RBP9.06□□□□□ -0.96
SCFD1-222ENST00000556768 HOOK2Q96ED9 719 aa9.06□□□□□ -0.96
SCFD1-222ENST00000556768 SAGE1Q9NXZ1 904 aa9.06□□□□□ -0.96
SCFD1-222ENST00000556768 DENND2AQ9ULE3 1009 aa9.06□□□□□ -0.96
SCFD1-222ENST00000556768 ANGEL1Q9UNK9 670 aaKnown RBP9.06□□□□□ -0.96
SCFD1-222ENST00000556768 MYH3P11055 1940 aa9.06□□□□□ -0.96
SCFD1-222ENST00000556768 TRPA1O75762 1119 aa9.05□□□□□ -0.96
SCFD1-222ENST00000556768 FXR2P51116 673 aaKnown RBP eCLIP9.05□□□□□ -0.96
SCFD1-222ENST00000556768 INHBEP58166 350 aa9.05□□□□□ -0.96
SCFD1-222ENST00000556768 SREBF2Q12772 1141 aa9.05□□□□□ -0.96
SCFD1-222ENST00000556768 DDRGK1Q96HY6 314 aa9.05□□□□□ -0.96
SCFD1-222ENST00000556768 CSRNP1Q96S65 589 aa9.05□□□□□ -0.96
SCFD1-222ENST00000556768 TDRD3Q9H7E2 651 aaKnown RBP9.05□□□□□ -0.96
SCFD1-222ENST00000556768 TSKSQ9UJT2 592 aa9.05□□□□□ -0.96
SCFD1-222ENST00000556768 PA2G4Q9UQ80 394 aaKnown RBP9.05□□□□□ -0.96
SCFD1-222ENST00000556768 LDHBP07195 334 aaKnown RBP9.05□□□□□ -0.96
SCFD1-222ENST00000556768 OS9Q13438 667 aaPredicted RBP9.05□□□□□ -0.96
SCFD1-222ENST00000556768 MTX1Q13505 466 aa9.05□□□□□ -0.96
SCFD1-222ENST00000556768 MVPQ14764 893 aaKnown RBP9.05□□□□□ -0.96
SCFD1-222ENST00000556768 MOB2Q70IA6 237 aa9.05□□□□□ -0.96
SCFD1-222ENST00000556768 RASAL3Q86YV0 1011 aa9.05□□□□□ -0.96
SCFD1-222ENST00000556768 ITPRIPQ8IWB1 547 aa9.05□□□□□ -0.96
SCFD1-222ENST00000556768 SLF2Q8IX21 1173 aa9.05□□□□□ -0.96
SCFD1-222ENST00000556768 NEUROD6Q96NK8 337 aa9.05□□□□□ -0.96
SCFD1-222ENST00000556768 ZIC5Q96T25 663 aa9.05□□□□□ -0.96
SCFD1-222ENST00000556768 ZNF70Q9UC06 446 aaPredicted RBP9.05□□□□□ -0.96
SCFD1-222ENST00000556768 SCN9AQ15858 1988 aa9.04□□□□□ -0.96
SCFD1-222ENST00000556768 COL1A1P02452 1464 aaPredicted RBP9.04□□□□□ -0.96
SCFD1-222ENST00000556768 TCP10L2B9ZVM9 353 aa9.04□□□□□ -0.96
SCFD1-222ENST00000556768 SPTY2D1Q68D10 685 aaPredicted RBP9.04□□□□□ -0.96
SCFD1-222ENST00000556768 HHIPL2Q6UWX4 724 aa9.04□□□□□ -0.96
SCFD1-222ENST00000556768 TMEM57Q8N5G2 664 aa9.04□□□□□ -0.96
SCFD1-222ENST00000556768 ZDHHC15Q96MV8 337 aa9.04□□□□□ -0.96
SCFD1-222ENST00000556768 RNF186Q9NXI6 227 aa9.04□□□□□ -0.96
SCFD1-222ENST00000556768 PCDHAC2Q9Y5I4 1007 aa9.04□□□□□ -0.96
SCFD1-222ENST00000556768 ALDH1A1P00352 501 aa9.03□□□□□ -0.96
SCFD1-222ENST00000556768 TIMM10P62072 90 aa9.03□□□□□ -0.96
SCFD1-222ENST00000556768 LDLRAD1Q5T700 205 aa9.03□□□□□ -0.96
SCFD1-222ENST00000556768 NBPF12Q5TAG4 269 aaPredicted RBP9.03□□□□□ -0.96
SCFD1-222ENST00000556768 CCDC102BQ68D86 513 aa9.03□□□□□ -0.96
SCFD1-222ENST00000556768 OTUD7BQ6GQQ9 843 aa9.03□□□□□ -0.96
SCFD1-222ENST00000556768 ANKRD13AQ8IZ07 590 aa9.03□□□□□ -0.96
SCFD1-222ENST00000556768 TMEM106CQ9BVX2 250 aa9.03□□□□□ -0.96
SCFD1-222ENST00000556768 A0A1B0GUL7 405 aa9.03□□□□□ -0.96
SCFD1-222ENST00000556768 ZBTB48P10074 688 aaPredicted RBP9.03□□□□□ -0.96
SCFD1-222ENST00000556768 TFCP2Q12800 502 aa9.03□□□□□ -0.96
SCFD1-222ENST00000556768 MAP3K11Q16584 847 aa9.03□□□□□ -0.96
SCFD1-222ENST00000556768 AMHR2Q16671 573 aa9.03□□□□□ -0.96
SCFD1-222ENST00000556768 FKBP1CQ5VVH2 108 aa9.03□□□□□ -0.96
SCFD1-222ENST00000556768 CHMP4BQ9H444 224 aaKnown RBP9.03□□□□□ -0.96
SCFD1-222ENST00000556768 ABCF2Q9UG63 623 aa9.03□□□□□ -0.96
SCFD1-222ENST00000556768 CSADQ9Y600 493 aa9.03□□□□□ -0.96
SCFD1-222ENST00000556768 MANSC4A6NHS7 340 aaPredicted RBP9.02□□□□□ -0.97
SCFD1-222ENST00000556768 PHKA1P46020 1223 aa9.02□□□□□ -0.97
SCFD1-222ENST00000556768 TM4SF4P48230 202 aa9.02□□□□□ -0.97
SCFD1-222ENST00000556768 MAP2K5Q13163 448 aa9.02□□□□□ -0.97
SCFD1-222ENST00000556768 SPRYD7Q5W111 196 aa9.02□□□□□ -0.97
SCFD1-222ENST00000556768 FAM83AQ86UY5 434 aa9.02□□□□□ -0.97
SCFD1-222ENST00000556768 DZIP1Q86YF9 867 aaKnown RBP9.02□□□□□ -0.97
SCFD1-222ENST00000556768 XAGE2Q96GT9 111 aa9.02□□□□□ -0.97
SCFD1-222ENST00000556768 APBB1O00213 710 aa9.01□□□□□ -0.97
SCFD1-222ENST00000556768 USP2O75604 605 aaPredicted RBP9.01□□□□□ -0.97
SCFD1-222ENST00000556768 SURF6O75683 361 aaKnown RBP9.01□□□□□ -0.97
SCFD1-222ENST00000556768 WDHD1O75717 1129 aaPredicted RBP9.01□□□□□ -0.97
SCFD1-222ENST00000556768 DSG2Q14126 1118 aa9.01□□□□□ -0.97
SCFD1-222ENST00000556768 CCDC158Q5M9N0 1113 aa9.01□□□□□ -0.97
SCFD1-222ENST00000556768 DCAF15Q66K64 600 aa9.01□□□□□ -0.97
SCFD1-222ENST00000556768 APOBEC3HQ6NTF7 200 aaKnown RBP9.01□□□□□ -0.97
SCFD1-222ENST00000556768 TMEM39BQ9GZU3 492 aa9.01□□□□□ -0.97
SCFD1-222ENST00000556768 SALL1Q9NSC2 1324 aa9.01□□□□□ -0.97
SCFD1-222ENST00000556768 PNMA6EA0A0J9YXQ4 647 aa9.01□□□□□ -0.97
SCFD1-222ENST00000556768 IRF6O14896 467 aa9.01□□□□□ -0.97
SCFD1-222ENST00000556768 PRDX5P30044 214 aa9.01□□□□□ -0.97
SCFD1-222ENST00000556768 MAP3K9P80192 1104 aa9.01□□□□□ -0.97
SCFD1-222ENST00000556768 ATP8B2P98198 1209 aa9.01□□□□□ -0.97
SCFD1-222ENST00000556768 DGKZQ13574 1117 aa9.01□□□□□ -0.97
SCFD1-222ENST00000556768 GRIK5Q16478 980 aa9.01□□□□□ -0.97
SCFD1-222ENST00000556768 PARP9Q8IXQ6 854 aa9.01□□□□□ -0.97
SCFD1-222ENST00000556768 FZD1Q9UP38 647 aa9.01□□□□□ -0.97
SCFD1-222ENST00000556768 TRPM7Q96QT4 1865 aa9□□□□□ -0.97
SCFD1-222ENST00000556768 ZBTB7BO15156 539 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms