RNA–Protein interactions for RNA: ENST00000556631.1

KTN1-224, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 5,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-224ENST00000556631 KIF9Q9HAQ2 790 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 KRT82Q9NSB4 513 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 SPATS2LQ9NUQ6 558 aaKnown RBP2.09□□□□□ -2.08
KTN1-224ENST00000556631 RAI14Q9P0K7 980 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 FAM184BQ9ULE4 1060 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 TMCC3Q9ULS5 477 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 SIK3Q9Y2K2 1263 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 CD2APQ9Y5K6 639 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 MAGED1Q9Y5V3 778 aaPredicted RBP2.09□□□□□ -2.08
KTN1-224ENST00000556631 ERICH2A1L162 156 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 USP17L3A6NCW0 530 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 USP17L4A6NCW7 530 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 H7C0S8 307 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 CAPN9O14815 690 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 MMEP08473 750 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 RLBP1P12271 317 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 HSPA6P17066 643 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 TMOD1P28289 359 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 ATN1P54259 1190 aaPredicted RBP2.09□□□□□ -2.08
KTN1-224ENST00000556631 USP46P62068 366 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 IL1RL1Q01638 556 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 DPYDQ12882 1025 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 EIF2B5Q13144 721 aaKnown RBP2.09□□□□□ -2.08
KTN1-224ENST00000556631 WTAPQ15007 396 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 FXNQ16595 210 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 ANO6Q4KMQ2 910 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 GKAP1Q5VSY0 366 aaPredicted RBP2.09□□□□□ -2.08
KTN1-224ENST00000556631 USP17L2Q6R6M4 530 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 UTS2BQ765I0 119 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 USP17L1Q7RTZ2 530 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 CATIPQ7Z7H3 387 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 C10orf53Q8N6V4 93 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 CERKQ8TCT0 537 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 SKA1Q96BD8 255 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 DMRTB1Q96MA1 342 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 TTC1Q99614 292 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 FAM167BQ9BTA0 163 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 PLVAPQ9BX97 442 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 FTOQ9C0B1 505 aaKnown RBP eCLIP2.09□□□□□ -2.08
KTN1-224ENST00000556631 UBE2OQ9C0C9 1292 aaKnown RBP2.09□□□□□ -2.08
KTN1-224ENST00000556631 UNC45AQ9H3U1 944 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 LZTFL1Q9NQ48 299 aa2.09□□□□□ -2.08
KTN1-224ENST00000556631 ZHX1Q9UKY1 873 aaPredicted RBP2.09□□□□□ -2.08
KTN1-224ENST00000556631 PNMA6FA0A0J9YX94 578 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 GOLGA8AA7E2F4 631 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 GOLGA8BA8MQT2 603 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 CIB2O75838 187 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 SMC2O95347 1197 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 ADAMTS2O95450 1211 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 SLC5A1P13866 664 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 TRIM21P19474 475 aaKnown RBP2.08□□□□□ -2.08
KTN1-224ENST00000556631 NOP2P46087 812 aaKnown RBP2.08□□□□□ -2.08
KTN1-224ENST00000556631 EIF5P55010 431 aaKnown RBP2.08□□□□□ -2.08
KTN1-224ENST00000556631 EVCP57679 992 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 CAMK2BQ13554 666 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 SNX1Q13596 522 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 MLC1Q15049 377 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 TSC22D1Q15714 1073 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 GSTA5Q7RTV2 222 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 KIAA0825Q8IV33 1275 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 SLFN12Q8IYM2 578 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 WDR66Q8TBY9 1149 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 SECISBP2LQ93073 1101 aaKnown RBP2.08□□□□□ -2.08
KTN1-224ENST00000556631 GPRASP2Q96D09 838 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 IFT74Q96LB3 600 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 FAM161BQ96MY7 647 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 FAM210AQ96ND0 272 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 NIF3L1Q9GZT8 377 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 ZCWPW1Q9H0M4 648 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 ACBD3Q9H3P7 528 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 SSU72Q9NP77 194 aaKnown RBP2.08□□□□□ -2.08
KTN1-224ENST00000556631 HAUS2Q9NVX0 235 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 EID1Q9Y6B2 187 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 A0A1B0GUA9 196 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 TAF4O00268 1085 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 IRAK2O43187 625 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 TMEM127O75204 238 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 REC8O95072 547 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 SERPINC1P01008 464 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 MYBL2P10244 700 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 OCRLQ01968 901 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 STRN3Q13033 797 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 USP4Q13107 963 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 UTP14CQ5TAP6 766 aaKnown RBP2.08□□□□□ -2.08
KTN1-224ENST00000556631 FAM186BQ8IYM0 893 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 KIAA2013Q8IYS2 634 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 CEP57L1Q8IYX8 460 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 JMYQ8N9B5 988 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 SPC24Q8NBT2 197 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 PPFIBP2Q8ND30 876 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 GTF3C2Q8WUA4 911 aaPredicted RBP2.08□□□□□ -2.08
KTN1-224ENST00000556631 TBATAQ96M53 351 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 DEPDC7Q96QD5 511 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 SEPSECSQ9HD40 501 aaKnown RBP2.08□□□□□ -2.08
KTN1-224ENST00000556631 CABP5Q9NP86 173 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 IP6K2Q9UHH9 426 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 ATP6V1HQ9UI12 483 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 DMGDHQ9UI17 866 aaKnown RBP2.08□□□□□ -2.08
KTN1-224ENST00000556631 STRIP2Q9ULQ0 834 aa2.08□□□□□ -2.08
KTN1-224ENST00000556631 STK38LQ9Y2H1 464 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms