RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 BACH2Q9BYV9 841 aa7.79□□□□□ -1.16
CPSF2-205ENST00000556622 PHACTR1Q9C0D0 580 aa7.79□□□□□ -1.16
CPSF2-205ENST00000556622 CHMP4BQ9H444 224 aaKnown RBP7.79□□□□□ -1.16
CPSF2-205ENST00000556622 QTRT2Q9H974 415 aaKnown RBP7.79□□□□□ -1.16
CPSF2-205ENST00000556622 STRN4Q9NRL3 753 aa7.79□□□□□ -1.16
CPSF2-205ENST00000556622 HCN4Q9Y3Q4 1203 aa7.79□□□□□ -1.16
CPSF2-205ENST00000556622 PNPLA6Q8IY17 1366 aa7.79□□□□□ -1.16
CPSF2-205ENST00000556622 MAPK8IP3Q9UPT6 1336 aa7.78□□□□□ -1.16
CPSF2-205ENST00000556622 ANKARQ7Z5J8 1434 aa7.78□□□□□ -1.16
CPSF2-205ENST00000556622 FMN2Q9NZ56 1722 aa7.78□□□□□ -1.16
CPSF2-205ENST00000556622 RTN1Q16799 776 aa7.78□□□□□ -1.16
CPSF2-205ENST00000556622 C8orf86Q6ZUL3 223 aa7.78□□□□□ -1.16
CPSF2-205ENST00000556622 MYO19Q96H55 970 aa7.78□□□□□ -1.16
CPSF2-205ENST00000556622 ANKIB1Q9P2G1 1089 aa7.78□□□□□ -1.16
CPSF2-205ENST00000556622 POLR3AO14802 1390 aaPredicted RBP7.78□□□□□ -1.16
CPSF2-205ENST00000556622 NHSL1Q5SYE7 1610 aa7.78□□□□□ -1.16
CPSF2-205ENST00000556622 ACEP12821 1306 aa7.78□□□□□ -1.16
CPSF2-205ENST00000556622 AFF2P51816 1311 aa7.78□□□□□ -1.16
CPSF2-205ENST00000556622 RXRBP28702 533 aa7.77□□□□□ -1.17
CPSF2-205ENST00000556622 SLFN5Q08AF3 891 aa7.77□□□□□ -1.17
CPSF2-205ENST00000556622 HIF1AQ16665 826 aa7.77□□□□□ -1.17
CPSF2-205ENST00000556622 WDR63Q8IWG1 891 aa7.77□□□□□ -1.17
CPSF2-205ENST00000556622 EXOC6Q8TAG9 804 aa7.77□□□□□ -1.17
CPSF2-205ENST00000556622 MDFIQ99750 246 aa7.77□□□□□ -1.17
CPSF2-205ENST00000556622 KRTAP4-7Q9BYR0 210 aa7.77□□□□□ -1.17
CPSF2-205ENST00000556622 UPF2Q9HAU5 1272 aaKnown RBP7.77□□□□□ -1.17
CPSF2-205ENST00000556622 ARHGEF28Q8N1W1 1705 aaKnown RBP7.76□□□□□ -1.17
CPSF2-205ENST00000556622 ELOA3CA0A087WX78 387 aaPredicted RBP7.76□□□□□ -1.17
CPSF2-205ENST00000556622 TMEM88BA6NKF7 163 aa7.76□□□□□ -1.17
CPSF2-205ENST00000556622 SPDYE3A6NKU9 549 aa7.76□□□□□ -1.17
CPSF2-205ENST00000556622 ELOA3DA6NLF2 546 aaPredicted RBP7.76□□□□□ -1.17
CPSF2-205ENST00000556622 CANXP27824 592 aaKnown RBP7.76□□□□□ -1.17
CPSF2-205ENST00000556622 KCNQ4P56696 695 aa7.76□□□□□ -1.17
CPSF2-205ENST00000556622 CCDC27Q2M243 656 aa7.76□□□□□ -1.17
CPSF2-205ENST00000556622 ELOA3BQ3SY89 546 aa7.76□□□□□ -1.17
CPSF2-205ENST00000556622 IER5Q5VY09 327 aa7.76□□□□□ -1.17
CPSF2-205ENST00000556622 NUTM2GQ5VZR2 741 aa7.76□□□□□ -1.17
CPSF2-205ENST00000556622 BICDL1Q6ZP65 573 aa7.76□□□□□ -1.17
CPSF2-205ENST00000556622 ABTB2Q8N961 1025 aa7.76□□□□□ -1.17
CPSF2-205ENST00000556622 ELOA3Q8NG57 546 aa7.76□□□□□ -1.17
CPSF2-205ENST00000556622 SUSD3Q96L08 255 aa7.76□□□□□ -1.17
CPSF2-205ENST00000556622 MYH16Q9H6N6 1097 aa7.76□□□□□ -1.17
CPSF2-205ENST00000556622 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.76□□□□□ -1.17
CPSF2-205ENST00000556622 USP21Q9UK80 565 aa7.76□□□□□ -1.17
CPSF2-205ENST00000556622 PRR12Q9ULL5 1215 aa7.76□□□□□ -1.17
CPSF2-205ENST00000556622 SHPRHQ149N8 1683 aa7.76□□□□□ -1.17
CPSF2-205ENST00000556622 PXDNQ92626 1479 aa7.75□□□□□ -1.17
CPSF2-205ENST00000556622 SBNO1A3KN83 1393 aa7.75□□□□□ -1.17
CPSF2-205ENST00000556622 NEFMP07197 916 aa7.75□□□□□ -1.17
CPSF2-205ENST00000556622 FKBP5Q13451 457 aaPredicted RBP7.75□□□□□ -1.17
CPSF2-205ENST00000556622 BECN1Q14457 450 aa7.75□□□□□ -1.17
CPSF2-205ENST00000556622 DUSP27Q5VZP5 1158 aa7.75□□□□□ -1.17
CPSF2-205ENST00000556622 MORC1Q86VD1 984 aa7.75□□□□□ -1.17
CPSF2-205ENST00000556622 TRMT2AQ8IZ69 625 aaKnown RBP7.75□□□□□ -1.17
CPSF2-205ENST00000556622 RHPN1Q8TCX5 695 aa7.75□□□□□ -1.17
CPSF2-205ENST00000556622 RUNDC1Q96C34 613 aa7.75□□□□□ -1.17
CPSF2-205ENST00000556622 CXXC1Q9P0U4 656 aaPredicted RBP7.75□□□□□ -1.17
CPSF2-205ENST00000556622 DMGDHQ9UI17 866 aaKnown RBP7.75□□□□□ -1.17
CPSF2-205ENST00000556622 ZNF521Q96K83 1311 aa7.75□□□□□ -1.17
CPSF2-205ENST00000556622 LRP6O75581 1613 aa7.74□□□□□ -1.17
CPSF2-205ENST00000556622 ARHGEF10O15013 1369 aa7.74□□□□□ -1.17
CPSF2-205ENST00000556622 TULP4Q9NRJ4 1543 aa7.74□□□□□ -1.17
CPSF2-205ENST00000556622 KIF1AQ12756 1690 aa7.74□□□□□ -1.17
CPSF2-205ENST00000556622 M0R082 166 aa7.74□□□□□ -1.17
CPSF2-205ENST00000556622 LGR5O75473 907 aa7.74□□□□□ -1.17
CPSF2-205ENST00000556622 H2AFB1P0C5Y9 115 aa7.74□□□□□ -1.17
CPSF2-205ENST00000556622 H2AFB2P0C5Z0 115 aa7.74□□□□□ -1.17
CPSF2-205ENST00000556622 MCTP1Q6DN14 999 aa7.74□□□□□ -1.17
CPSF2-205ENST00000556622 LRRC69Q6ZNQ3 347 aa7.74□□□□□ -1.17
CPSF2-205ENST00000556622 ZNF417Q8TAU3 575 aa7.74□□□□□ -1.17
CPSF2-205ENST00000556622 ZNF587Q96SQ5 575 aaPredicted RBP7.74□□□□□ -1.17
CPSF2-205ENST00000556622 TRPC5Q9UL62 973 aaPredicted RBP7.74□□□□□ -1.17
CPSF2-205ENST00000556622 STARD13Q9Y3M8 1113 aa7.74□□□□□ -1.17
CPSF2-205ENST00000556622 ADGRB2O60241 1585 aa7.73□□□□□ -1.17
CPSF2-205ENST00000556622 PPIP5K1Q6PFW1 1433 aa7.73□□□□□ -1.17
CPSF2-205ENST00000556622 FAM83GA6ND36 823 aa7.73□□□□□ -1.17
CPSF2-205ENST00000556622 RBM6P78332 1123 aaKnown RBP7.73□□□□□ -1.17
CPSF2-205ENST00000556622 CALD1Q05682 793 aaKnown RBP7.73□□□□□ -1.17
CPSF2-205ENST00000556622 LCE1DQ5T752 114 aa7.73□□□□□ -1.17
CPSF2-205ENST00000556622 SYT9Q86SS6 491 aa7.73□□□□□ -1.17
CPSF2-205ENST00000556622 ZNF280CQ8ND82 737 aa7.73□□□□□ -1.17
CPSF2-205ENST00000556622 ZNF428Q96B54 188 aa7.73□□□□□ -1.17
CPSF2-205ENST00000556622 PRIMPOLQ96LW4 560 aa7.73□□□□□ -1.17
CPSF2-205ENST00000556622 BCS1LQ9Y276 419 aa7.73□□□□□ -1.17
CPSF2-205ENST00000556622 CCDC9Q9Y3X0 531 aaKnown RBP7.73□□□□□ -1.17
CPSF2-205ENST00000556622 GJA3Q9Y6H8 435 aa7.73□□□□□ -1.17
CPSF2-205ENST00000556622 USP32Q8NFA0 1604 aa7.73□□□□□ -1.17
CPSF2-205ENST00000556622 TNS3Q68CZ2 1445 aa7.72□□□□□ -1.17
CPSF2-205ENST00000556622 PTCD1O75127 700 aaKnown RBP7.72□□□□□ -1.17
CPSF2-205ENST00000556622 ALBP02768 609 aa7.72□□□□□ -1.17
CPSF2-205ENST00000556622 ZC3H6P61129 1189 aaKnown RBP7.72□□□□□ -1.17
CPSF2-205ENST00000556622 TRIM28Q13263 835 aaKnown RBP7.72□□□□□ -1.17
CPSF2-205ENST00000556622 C11orf91Q3C1V1 193 aa7.72□□□□□ -1.17
CPSF2-205ENST00000556622 HDGFL2Q7Z4V5 671 aaPredicted RBP7.72□□□□□ -1.17
CPSF2-205ENST00000556622 UNC5CLQ8IV45 518 aa7.72□□□□□ -1.17
CPSF2-205ENST00000556622 NACC1Q96RE7 527 aa7.72□□□□□ -1.17
CPSF2-205ENST00000556622 CRBNQ96SW2 442 aa7.72□□□□□ -1.17
CPSF2-205ENST00000556622 SLC12A5Q9H2X9 1139 aa7.72□□□□□ -1.17
CPSF2-205ENST00000556622 RWDD1Q9H446 243 aaPredicted RBP7.72□□□□□ -1.17
CPSF2-205ENST00000556622 NEUROD4Q9HD90 331 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms