RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 TMEM39BQ9GZU3 492 aa20.83■□□□□ 0.93
PSEN1-217ENST00000556533 BOLA2Q9H3K6 86 aa20.83■□□□□ 0.93
PSEN1-217ENST00000556533 ANTXR1Q9H6X2 564 aa20.83■□□□□ 0.93
PSEN1-217ENST00000556533 MROH7-TTC4A0A0A0MT08 1334 aa20.82■□□□□ 0.92
PSEN1-217ENST00000556533 TCP10Q12799 353 aa20.82■□□□□ 0.92
PSEN1-217ENST00000556533 ANKRD45Q5TZF3 282 aa20.82■□□□□ 0.92
PSEN1-217ENST00000556533 FAM163AQ96GL9 167 aaPredicted RBP20.82■□□□□ 0.92
PSEN1-217ENST00000556533 CAPNS2Q96L46 248 aa20.82■□□□□ 0.92
PSEN1-217ENST00000556533 FZD1Q9UP38 647 aa20.82■□□□□ 0.92
PSEN1-217ENST00000556533 GAKO14976 1311 aa20.81■□□□□ 0.92
PSEN1-217ENST00000556533 POLR2AP24928 1970 aaKnown RBP20.81■□□□□ 0.92
PSEN1-217ENST00000556533 MYH13Q9UKX3 1938 aa20.81■□□□□ 0.92
PSEN1-217ENST00000556533 GOLIM4O00461 696 aa20.81■□□□□ 0.92
PSEN1-217ENST00000556533 NOL10Q9BSC4 688 aaKnown RBP20.81■□□□□ 0.92
PSEN1-217ENST00000556533 WDR33Q9C0J8 1336 aaKnown RBP20.8■□□□□ 0.92
PSEN1-217ENST00000556533 ATP5JP18859 108 aa20.8■□□□□ 0.92
PSEN1-217ENST00000556533 ECE1P42892 770 aa20.8■□□□□ 0.92
PSEN1-217ENST00000556533 ARMC9Q7Z3E5 817 aa20.8■□□□□ 0.92
PSEN1-217ENST00000556533 CDAN1Q8IWY9 1227 aa20.8■□□□□ 0.92
PSEN1-217ENST00000556533 GCC1Q96CN9 775 aa20.8■□□□□ 0.92
PSEN1-217ENST00000556533 GPATCH3Q96I76 525 aa20.8■□□□□ 0.92
PSEN1-217ENST00000556533 ECHDC1Q9NTX5 307 aa20.8■□□□□ 0.92
PSEN1-217ENST00000556533 ANGEL1Q9UNK9 670 aaKnown RBP20.8■□□□□ 0.92
PSEN1-217ENST00000556533 GPR75-ASB3A0A0A6YYF3 556 aa20.79■□□□□ 0.92
PSEN1-217ENST00000556533 IGHDP01880 384 aa20.79■□□□□ 0.92
PSEN1-217ENST00000556533 CYP7A1P22680 504 aa20.79■□□□□ 0.92
PSEN1-217ENST00000556533 ZNF157P51786 506 aaPredicted RBP20.79■□□□□ 0.92
PSEN1-217ENST00000556533 FKBP1BP68106 108 aa20.79■□□□□ 0.92
PSEN1-217ENST00000556533 MAP3K12Q12852 859 aa20.79■□□□□ 0.92
PSEN1-217ENST00000556533 NFIAQ12857 509 aa20.79■□□□□ 0.92
PSEN1-217ENST00000556533 FKBP1CQ5VVH2 108 aa20.79■□□□□ 0.92
PSEN1-217ENST00000556533 TSHZ3Q63HK5 1081 aa20.79■□□□□ 0.92
PSEN1-217ENST00000556533 B4GALNT3Q6L9W6 998 aa20.79■□□□□ 0.92
PSEN1-217ENST00000556533 RGMBQ6NW40 437 aa20.79■□□□□ 0.92
PSEN1-217ENST00000556533 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.79■□□□□ 0.92
PSEN1-217ENST00000556533 EDC3Q96F86 508 aaKnown RBP20.79■□□□□ 0.92
PSEN1-217ENST00000556533 PPP1R12BO60237 982 aaPredicted RBP20.78■□□□□ 0.92
PSEN1-217ENST00000556533 TTF1Q15361 905 aaPredicted RBP20.78■□□□□ 0.92
PSEN1-217ENST00000556533 FAM83AQ86UY5 434 aa20.78■□□□□ 0.92
PSEN1-217ENST00000556533 MAGEB6Q8N7X4 407 aa20.78■□□□□ 0.92
PSEN1-217ENST00000556533 HHIPL1Q96JK4 782 aa20.78■□□□□ 0.92
PSEN1-217ENST00000556533 TEPSINQ96N21 525 aa20.78■□□□□ 0.92
PSEN1-217ENST00000556533 AOC2O75106 756 aa20.77■□□□□ 0.92
PSEN1-217ENST00000556533 BAG3O95817 575 aa20.77■□□□□ 0.92
PSEN1-217ENST00000556533 RGS3P49796 1198 aa20.77■□□□□ 0.92
PSEN1-217ENST00000556533 PICALMQ13492 652 aa20.77■□□□□ 0.92
PSEN1-217ENST00000556533 OTUD7AQ8TE49 926 aaPredicted RBP20.77■□□□□ 0.92
PSEN1-217ENST00000556533 HAUS7Q99871 368 aa20.77■□□□□ 0.92
PSEN1-217ENST00000556533 PAG1Q9NWQ8 432 aa20.77■□□□□ 0.92
PSEN1-217ENST00000556533 AATFQ9NY61 560 aaKnown RBP eCLIP20.77■□□□□ 0.92
PSEN1-217ENST00000556533 FAM198AQ9UFP1 575 aa20.77■□□□□ 0.92
PSEN1-217ENST00000556533 TRPM7Q96QT4 1865 aa20.77■□□□□ 0.92
PSEN1-217ENST00000556533 ADGRA1Q86SQ6 560 aa20.76■□□□□ 0.91
PSEN1-217ENST00000556533 ZFPM1Q8IX07 1006 aa20.76■□□□□ 0.91
PSEN1-217ENST00000556533 SH3RF3Q8TEJ3 882 aaPredicted RBP20.76■□□□□ 0.91
PSEN1-217ENST00000556533 FAM151AQ8WW52 585 aa20.76■□□□□ 0.91
PSEN1-217ENST00000556533 USP2O75604 605 aaPredicted RBP20.75■□□□□ 0.91
PSEN1-217ENST00000556533 SLC9C2Q5TAH2 1124 aa20.75■□□□□ 0.91
PSEN1-217ENST00000556533 ZSCAN29Q8IWY8 852 aaPredicted RBP20.75■□□□□ 0.91
PSEN1-217ENST00000556533 TEX11Q8IYF3 940 aa20.75■□□□□ 0.91
PSEN1-217ENST00000556533 JMYQ8N9B5 988 aa20.75■□□□□ 0.91
PSEN1-217ENST00000556533 WDHD1O75717 1129 aaPredicted RBP20.74■□□□□ 0.91
PSEN1-217ENST00000556533 IREB2P48200 963 aaKnown RBP20.74■□□□□ 0.91
PSEN1-217ENST00000556533 RHBDL3P58872 404 aa20.74■□□□□ 0.91
PSEN1-217ENST00000556533 MIGA2Q7L4E1 593 aa20.74■□□□□ 0.91
PSEN1-217ENST00000556533 MIGA1Q8NAN2 632 aa20.74■□□□□ 0.91
PSEN1-217ENST00000556533 CCDC102AQ96A19 550 aa20.74■□□□□ 0.91
PSEN1-217ENST00000556533 IDI2Q9BXS1 227 aa20.74■□□□□ 0.91
PSEN1-217ENST00000556533 ENTPD3O75355 529 aa20.73■□□□□ 0.91
PSEN1-217ENST00000556533 DYNLL1P63167 89 aaKnown RBP20.73■□□□□ 0.91
PSEN1-217ENST00000556533 SLC10A4Q96EP9 437 aa20.73■□□□□ 0.91
PSEN1-217ENST00000556533 LNPKQ9C0E8 428 aa20.73■□□□□ 0.91
PSEN1-217ENST00000556533 DDX4Q9NQI0 724 aaKnown RBP20.73■□□□□ 0.91
PSEN1-217ENST00000556533 SSC5DA1L4H1 1573 aa20.72■□□□□ 0.91
PSEN1-217ENST00000556533 IGSF3O75054 1194 aa20.72■□□□□ 0.91
PSEN1-217ENST00000556533 MAP4K4O95819 1239 aaPredicted RBP20.72■□□□□ 0.91
PSEN1-217ENST00000556533 PDE6AP16499 860 aa20.72■□□□□ 0.91
PSEN1-217ENST00000556533 PLCG2P16885 1265 aa20.72■□□□□ 0.91
PSEN1-217ENST00000556533 LDLRAD1Q5T700 205 aa20.72■□□□□ 0.91
PSEN1-217ENST00000556533 SMC5Q8IY18 1101 aa20.72■□□□□ 0.91
PSEN1-217ENST00000556533 HOOK2Q96ED9 719 aa20.72■□□□□ 0.91
PSEN1-217ENST00000556533 AKAP11Q9UKA4 1901 aa20.71■□□□□ 0.91
PSEN1-217ENST00000556533 MX1P20591 662 aa20.71■□□□□ 0.91
PSEN1-217ENST00000556533 PPP4CP60510 307 aa20.71■□□□□ 0.91
PSEN1-217ENST00000556533 MKRN3Q13064 507 aaKnown RBP20.71■□□□□ 0.91
PSEN1-217ENST00000556533 CLMNQ96JQ2 1002 aa20.71■□□□□ 0.91
PSEN1-217ENST00000556533 ZIC5Q96T25 663 aa20.71■□□□□ 0.91
PSEN1-217ENST00000556533 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.71■□□□□ 0.91
PSEN1-217ENST00000556533 ZNF532Q9HCE3 1301 aa20.71■□□□□ 0.91
PSEN1-217ENST00000556533 PAPPA2Q9BXP8 1791 aa20.7■□□□□ 0.9
PSEN1-217ENST00000556533 ECM29Q5VYK3 1845 aa20.7■□□□□ 0.9
PSEN1-217ENST00000556533 FAM155AB1AL88 458 aaPredicted RBP20.7■□□□□ 0.9
PSEN1-217ENST00000556533 ERC2O15083 957 aa20.7■□□□□ 0.9
PSEN1-217ENST00000556533 NOGQ13253 232 aa20.7■□□□□ 0.9
PSEN1-217ENST00000556533 DCAF15Q66K64 600 aa20.7■□□□□ 0.9
PSEN1-217ENST00000556533 RASAL3Q86YV0 1011 aa20.7■□□□□ 0.9
PSEN1-217ENST00000556533 TGFBRAP1Q8WUH2 860 aa20.7■□□□□ 0.9
PSEN1-217ENST00000556533 CSRNP1Q96S65 589 aa20.7■□□□□ 0.9
PSEN1-217ENST00000556533 TTC41PQ6P2S7 1318 aa20.7■□□□□ 0.9
PSEN1-217ENST00000556533 MYH2Q9UKX2 1941 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms