RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 GJA5P36382 358 aa9.98□□□□□ -0.81
VTI1B-206ENST00000556461 MECOMQ03112 1051 aa9.98□□□□□ -0.81
VTI1B-206ENST00000556461 TCP10Q12799 353 aa9.98□□□□□ -0.81
VTI1B-206ENST00000556461 BEGAINQ9BUH8 593 aa9.98□□□□□ -0.81
VTI1B-206ENST00000556461 IL1RAPL2Q9NP60 686 aa9.98□□□□□ -0.81
VTI1B-206ENST00000556461 RNF186Q9NXI6 227 aa9.98□□□□□ -0.81
VTI1B-206ENST00000556461 APBB1O00213 710 aa9.97□□□□□ -0.81
VTI1B-206ENST00000556461 PPP1R12BO60237 982 aaPredicted RBP9.97□□□□□ -0.81
VTI1B-206ENST00000556461 TRPA1O75762 1119 aa9.97□□□□□ -0.81
VTI1B-206ENST00000556461 CYP2E1P05181 493 aaPredicted RBP9.97□□□□□ -0.81
VTI1B-206ENST00000556461 UQCRFS1P1P0C7P4 283 aa9.97□□□□□ -0.81
VTI1B-206ENST00000556461 SLURP2P0DP57 97 aa9.97□□□□□ -0.81
VTI1B-206ENST00000556461 TNNI2P48788 182 aa9.97□□□□□ -0.81
VTI1B-206ENST00000556461 TTC39AQ5SRH9 613 aa9.97□□□□□ -0.81
VTI1B-206ENST00000556461 IFFO2Q5TF58 517 aa9.97□□□□□ -0.81
VTI1B-206ENST00000556461 FKBP1CQ5VVH2 108 aa9.97□□□□□ -0.81
VTI1B-206ENST00000556461 SPRYD7Q5W111 196 aa9.97□□□□□ -0.81
VTI1B-206ENST00000556461 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.97□□□□□ -0.81
VTI1B-206ENST00000556461 ERICH6Q7L0X2 663 aa9.97□□□□□ -0.81
VTI1B-206ENST00000556461 FAM83AQ86UY5 434 aa9.97□□□□□ -0.81
VTI1B-206ENST00000556461 DZIP1Q86YF9 867 aaKnown RBP9.97□□□□□ -0.81
VTI1B-206ENST00000556461 RPAP2Q8IXW5 612 aaPredicted RBP9.97□□□□□ -0.81
VTI1B-206ENST00000556461 TNS4Q8IZW8 715 aa9.97□□□□□ -0.81
VTI1B-206ENST00000556461 ZGPATQ8N5A5 531 aaKnown RBP9.97□□□□□ -0.81
VTI1B-206ENST00000556461 CNKSR2Q8WXI2 1034 aa9.97□□□□□ -0.81
VTI1B-206ENST00000556461 NSUN4Q96CB9 384 aaKnown RBP9.97□□□□□ -0.81
VTI1B-206ENST00000556461 WNK4Q96J92 1243 aa9.97□□□□□ -0.81
VTI1B-206ENST00000556461 TMOD2Q9NZR1 351 aa9.97□□□□□ -0.81
VTI1B-206ENST00000556461 NDUFB9Q9Y6M9 179 aa9.97□□□□□ -0.81
VTI1B-206ENST00000556461 BTDP43251 543 aa9.96□□□□□ -0.82
VTI1B-206ENST00000556461 ZAP70P43403 619 aa9.96□□□□□ -0.82
VTI1B-206ENST00000556461 IREB2P48200 963 aaKnown RBP9.96□□□□□ -0.82
VTI1B-206ENST00000556461 RHBDL3P58872 404 aa9.96□□□□□ -0.82
VTI1B-206ENST00000556461 SPTY2D1Q68D10 685 aaPredicted RBP9.96□□□□□ -0.82
VTI1B-206ENST00000556461 MIGA2Q7L4E1 593 aa9.96□□□□□ -0.82
VTI1B-206ENST00000556461 SH3BP5LQ7L8J4 393 aa9.96□□□□□ -0.82
VTI1B-206ENST00000556461 AACSQ86V21 672 aa9.96□□□□□ -0.82
VTI1B-206ENST00000556461 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.96□□□□□ -0.82
VTI1B-206ENST00000556461 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.96□□□□□ -0.82
VTI1B-206ENST00000556461 RHPN1Q8TCX5 695 aa9.96□□□□□ -0.82
VTI1B-206ENST00000556461 FAM151AQ8WW52 585 aa9.96□□□□□ -0.82
VTI1B-206ENST00000556461 SLC10A4Q96EP9 437 aa9.96□□□□□ -0.82
VTI1B-206ENST00000556461 FAM163AQ96GL9 167 aaPredicted RBP9.96□□□□□ -0.82
VTI1B-206ENST00000556461 ELP3Q9H9T3 547 aa9.96□□□□□ -0.82
VTI1B-206ENST00000556461 DDX4Q9NQI0 724 aaKnown RBP9.96□□□□□ -0.82
VTI1B-206ENST00000556461 PIH1D3Q9NQM4 214 aaKnown RBP9.96□□□□□ -0.82
VTI1B-206ENST00000556461 MROH7-TTC4A0A0A0MT08 1334 aa9.96□□□□□ -0.82
VTI1B-206ENST00000556461 RFX7Q2KHR2 1363 aa9.96□□□□□ -0.82
VTI1B-206ENST00000556461 GPR75-ASB3A0A0A6YYF3 556 aa9.95□□□□□ -0.82
VTI1B-206ENST00000556461 CA12O43570 354 aa9.95□□□□□ -0.82
VTI1B-206ENST00000556461 WDHD1O75717 1129 aaPredicted RBP9.95□□□□□ -0.82
VTI1B-206ENST00000556461 TM4SF4P48230 202 aa9.95□□□□□ -0.82
VTI1B-206ENST00000556461 RGS3P49796 1198 aa9.95□□□□□ -0.82
VTI1B-206ENST00000556461 VGLL4Q14135 290 aa9.95□□□□□ -0.82
VTI1B-206ENST00000556461 CCDC158Q5M9N0 1113 aa9.95□□□□□ -0.82
VTI1B-206ENST00000556461 ADGRA1Q86SQ6 560 aa9.95□□□□□ -0.82
VTI1B-206ENST00000556461 ANKRD13AQ8IZ07 590 aa9.95□□□□□ -0.82
VTI1B-206ENST00000556461 ZNF512BQ96KM6 892 aaPredicted RBP9.95□□□□□ -0.82
VTI1B-206ENST00000556461 BCL11AQ9H165 835 aa9.95□□□□□ -0.82
VTI1B-206ENST00000556461 R3HDMLQ9H3Y0 253 aa9.95□□□□□ -0.82
VTI1B-206ENST00000556461 RAI14Q9P0K7 980 aa9.95□□□□□ -0.82
VTI1B-206ENST00000556461 OTOFQ9HC10 1997 aa9.95□□□□□ -0.82
VTI1B-206ENST00000556461 AKAP11Q9UKA4 1901 aa9.94□□□□□ -0.82
VTI1B-206ENST00000556461 MYH2Q9UKX2 1941 aa9.94□□□□□ -0.82
VTI1B-206ENST00000556461 ATRNL1Q5VV63 1379 aa9.94□□□□□ -0.82
VTI1B-206ENST00000556461 RPAP1Q9BWH6 1393 aaPredicted RBP9.94□□□□□ -0.82
VTI1B-206ENST00000556461 DDTLA6NHG4 134 aaPredicted RBP9.94□□□□□ -0.82
VTI1B-206ENST00000556461 HMMRO75330 724 aa9.94□□□□□ -0.82
VTI1B-206ENST00000556461 TBC1D8O95759 1140 aa9.94□□□□□ -0.82
VTI1B-206ENST00000556461 RRP1P56182 461 aaKnown RBP9.94□□□□□ -0.82
VTI1B-206ENST00000556461 MAP3K9P80192 1104 aa9.94□□□□□ -0.82
VTI1B-206ENST00000556461 ERC1Q8IUD2 1116 aa9.94□□□□□ -0.82
VTI1B-206ENST00000556461 ZKSCAN4Q969J2 545 aaPredicted RBP9.94□□□□□ -0.82
VTI1B-206ENST00000556461 OPTNQ96CV9 577 aa9.94□□□□□ -0.82
VTI1B-206ENST00000556461 WRNIP1Q96S55 665 aa9.94□□□□□ -0.82
VTI1B-206ENST00000556461 IDI2Q9BXS1 227 aa9.94□□□□□ -0.82
VTI1B-206ENST00000556461 ANTXR1Q9H6X2 564 aa9.94□□□□□ -0.82
VTI1B-206ENST00000556461 SAGE1Q9NXZ1 904 aa9.94□□□□□ -0.82
VTI1B-206ENST00000556461 LRP2BPQ9P2M1 347 aa9.94□□□□□ -0.82
VTI1B-206ENST00000556461 SNCAIPQ9Y6H5 919 aa9.94□□□□□ -0.82
VTI1B-206ENST00000556461 UNCXA6NJT0 531 aa9.93□□□□□ -0.82
VTI1B-206ENST00000556461 IGF2BP3O00425 579 aaKnown RBP eCLIP9.93□□□□□ -0.82
VTI1B-206ENST00000556461 SMARCA5O60264 1052 aaPredicted RBP9.93□□□□□ -0.82
VTI1B-206ENST00000556461 CAPN15O75808 1086 aa9.93□□□□□ -0.82
VTI1B-206ENST00000556461 INPP5BP32019 993 aa9.93□□□□□ -0.82
VTI1B-206ENST00000556461 PICALMQ13492 652 aa9.93□□□□□ -0.82
VTI1B-206ENST00000556461 HSP90AB4PQ58FF6 505 aa9.93□□□□□ -0.82
VTI1B-206ENST00000556461 SLF2Q8IX21 1173 aa9.93□□□□□ -0.82
VTI1B-206ENST00000556461 REM2Q8IYK8 340 aaPredicted RBP9.93□□□□□ -0.82
VTI1B-206ENST00000556461 SH3RF3Q8TEJ3 882 aaPredicted RBP9.93□□□□□ -0.82
VTI1B-206ENST00000556461 KIF1BPQ96EK5 621 aa9.93□□□□□ -0.82
VTI1B-206ENST00000556461 PTPN18Q99952 460 aa9.93□□□□□ -0.82
VTI1B-206ENST00000556461 PCDHB15Q9Y5E8 787 aa9.93□□□□□ -0.82
VTI1B-206ENST00000556461 CASP8AP2Q9UKL3 1982 aa9.93□□□□□ -0.82
VTI1B-206ENST00000556461 ENTPD3O75355 529 aa9.92□□□□□ -0.82
VTI1B-206ENST00000556461 ZBTB48P10074 688 aaPredicted RBP9.92□□□□□ -0.82
VTI1B-206ENST00000556461 GSTO1P78417 241 aa9.92□□□□□ -0.82
VTI1B-206ENST00000556461 SREBF2Q12772 1141 aa9.92□□□□□ -0.82
VTI1B-206ENST00000556461 NAA16Q6N069 864 aaPredicted RBP9.92□□□□□ -0.82
VTI1B-206ENST00000556461 IFNL1Q8IU54 200 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms