RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 FMNL2Q96PY5 1086 aa8.43□□□□□ -1.06
SLIRP-204ENST00000555890 BCL2L12Q9HB09 334 aa8.43□□□□□ -1.06
SLIRP-204ENST00000555890 CHPF2Q9P2E5 772 aa8.43□□□□□ -1.06
SLIRP-204ENST00000555890 FAM198AQ9UFP1 575 aa8.43□□□□□ -1.06
SLIRP-204ENST00000555890 HDAC5Q9UQL6 1122 aa8.43□□□□□ -1.06
SLIRP-204ENST00000555890 PTPN22Q9Y2R2 807 aa8.43□□□□□ -1.06
SLIRP-204ENST00000555890 ZNF541Q9H0D2 1346 aa8.43□□□□□ -1.06
SLIRP-204ENST00000555890 CARMIL3Q8ND23 1372 aa8.43□□□□□ -1.06
SLIRP-204ENST00000555890 SNRPA1P09661 255 aaKnown RBP8.42□□□□□ -1.06
SLIRP-204ENST00000555890 CRKLP46109 303 aaKnown RBP8.42□□□□□ -1.06
SLIRP-204ENST00000555890 NFIXQ14938 502 aa8.42□□□□□ -1.06
SLIRP-204ENST00000555890 ZNF697Q5TEC3 545 aa8.42□□□□□ -1.06
SLIRP-204ENST00000555890 ANKRD45Q5TZF3 282 aa8.42□□□□□ -1.06
SLIRP-204ENST00000555890 NBPF11Q86T75 865 aa8.42□□□□□ -1.06
SLIRP-204ENST00000555890 CHD1LQ86WJ1 897 aa8.42□□□□□ -1.06
SLIRP-204ENST00000555890 DNAAF4Q8WXU2 420 aa8.42□□□□□ -1.06
SLIRP-204ENST00000555890 ASB2Q96Q27 587 aa8.42□□□□□ -1.06
SLIRP-204ENST00000555890 MEIS3Q99687 375 aa8.42□□□□□ -1.06
SLIRP-204ENST00000555890 SRCIN1Q9C0H9 1055 aa8.42□□□□□ -1.06
SLIRP-204ENST00000555890 ZBTB3Q9H5J0 574 aa8.42□□□□□ -1.06
SLIRP-204ENST00000555890 EPHX3Q9H6B9 360 aa8.42□□□□□ -1.06
SLIRP-204ENST00000555890 DCTPP1Q9H773 170 aa8.42□□□□□ -1.06
SLIRP-204ENST00000555890 PHAXQ9H814 394 aaKnown RBP8.42□□□□□ -1.06
SLIRP-204ENST00000555890 ANKRD31Q8N7Z5 1873 aa8.42□□□□□ -1.06
SLIRP-204ENST00000555890 TRPM7Q96QT4 1865 aa8.42□□□□□ -1.06
SLIRP-204ENST00000555890 CFAP47Q6ZTR5 3102 aa8.41□□□□□ -1.06
SLIRP-204ENST00000555890 NBPF26B4DH59 902 aa8.41□□□□□ -1.06
SLIRP-204ENST00000555890 SMIM22K7EJ46 135 aa8.41□□□□□ -1.06
SLIRP-204ENST00000555890 C21orf2O43822 256 aa8.41□□□□□ -1.06
SLIRP-204ENST00000555890 USP46P62068 366 aa8.41□□□□□ -1.06
SLIRP-204ENST00000555890 SLC39A6Q13433 755 aa8.41□□□□□ -1.06
SLIRP-204ENST00000555890 USPL1Q5W0Q7 1092 aa8.41□□□□□ -1.06
SLIRP-204ENST00000555890 KSR2Q6VAB6 950 aa8.41□□□□□ -1.06
SLIRP-204ENST00000555890 C2CD5Q86YS7 1000 aa8.41□□□□□ -1.06
SLIRP-204ENST00000555890 GPC2Q8N158 579 aa8.41□□□□□ -1.06
SLIRP-204ENST00000555890 TMEM134Q9H6X4 195 aa8.41□□□□□ -1.06
SLIRP-204ENST00000555890 PI4KAP2A4QPH2 592 aa8.4□□□□□ -1.06
SLIRP-204ENST00000555890 KDM4AO75164 1064 aa8.4□□□□□ -1.06
SLIRP-204ENST00000555890 ALDH1L1O75891 902 aa8.4□□□□□ -1.06
SLIRP-204ENST00000555890 SLC10A3P09131 477 aa8.4□□□□□ -1.06
SLIRP-204ENST00000555890 NUDT7P0C024 238 aa8.4□□□□□ -1.06
SLIRP-204ENST00000555890 UBTFL1P0CB47 393 aaPredicted RBP8.4□□□□□ -1.06
SLIRP-204ENST00000555890 C8orf34Q49A92 452 aa8.4□□□□□ -1.06
SLIRP-204ENST00000555890 CEP85Q6P2H3 762 aa8.4□□□□□ -1.06
SLIRP-204ENST00000555890 NUDT18Q6ZVK8 323 aa8.4□□□□□ -1.06
SLIRP-204ENST00000555890 SIRT2Q8IXJ6 389 aa8.4□□□□□ -1.06
SLIRP-204ENST00000555890 PI4KAP1Q8N8J0 262 aa8.4□□□□□ -1.06
SLIRP-204ENST00000555890 ZNF496Q96IT1 587 aaPredicted RBP8.4□□□□□ -1.06
SLIRP-204ENST00000555890 GLIS2Q9BZE0 524 aaPredicted RBP8.4□□□□□ -1.06
SLIRP-204ENST00000555890 SLX4Q8IY92 1834 aa8.4□□□□□ -1.07
SLIRP-204ENST00000555890 TJP1Q07157 1748 aa8.4□□□□□ -1.07
SLIRP-204ENST00000555890 SERPINB2P05120 415 aa8.39□□□□□ -1.07
SLIRP-204ENST00000555890 ATP8B2P98198 1209 aa8.39□□□□□ -1.07
SLIRP-204ENST00000555890 RDH13Q8NBN7 331 aa8.39□□□□□ -1.07
SLIRP-204ENST00000555890 C7orf43Q8WVR3 580 aa8.39□□□□□ -1.07
SLIRP-204ENST00000555890 LNPKQ9C0E8 428 aa8.39□□□□□ -1.07
SLIRP-204ENST00000555890 UPF2Q9HAU5 1272 aaKnown RBP8.39□□□□□ -1.07
SLIRP-204ENST00000555890 CACNA1SQ13698 1873 aa8.38□□□□□ -1.07
SLIRP-204ENST00000555890 UBR2Q8IWV8 1755 aa8.38□□□□□ -1.07
SLIRP-204ENST00000555890 COL11A2P13942 1736 aaPredicted RBP8.38□□□□□ -1.07
SLIRP-204ENST00000555890 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.38□□□□□ -1.07
SLIRP-204ENST00000555890 H0YIN7 160 aa8.38□□□□□ -1.07
SLIRP-204ENST00000555890 EIF5BO60841 1220 aaKnown RBP8.38□□□□□ -1.07
SLIRP-204ENST00000555890 ANXA1P04083 346 aa8.38□□□□□ -1.07
SLIRP-204ENST00000555890 FOSL2P15408 326 aa8.38□□□□□ -1.07
SLIRP-204ENST00000555890 RFX1P22670 979 aa8.38□□□□□ -1.07
SLIRP-204ENST00000555890 PBX2P40425 430 aa8.38□□□□□ -1.07
SLIRP-204ENST00000555890 NEXNQ0ZGT2 675 aa8.38□□□□□ -1.07
SLIRP-204ENST00000555890 BEND3Q5T5X7 828 aa8.38□□□□□ -1.07
SLIRP-204ENST00000555890 PPP1R12CQ9BZL4 782 aa8.38□□□□□ -1.07
SLIRP-204ENST00000555890 USP44Q9H0E7 712 aa8.38□□□□□ -1.07
SLIRP-204ENST00000555890 KCNH6Q9H252 994 aa8.38□□□□□ -1.07
SLIRP-204ENST00000555890 MAP3K2Q9Y2U5 619 aa8.38□□□□□ -1.07
SLIRP-204ENST00000555890 AKAP11Q9UKA4 1901 aa8.38□□□□□ -1.07
SLIRP-204ENST00000555890 PRAMEF22A3QJZ6 481 aa8.37□□□□□ -1.07
SLIRP-204ENST00000555890 PPP1R3GB7ZBB8 358 aa8.37□□□□□ -1.07
SLIRP-204ENST00000555890 PTCD1O75127 700 aaKnown RBP8.37□□□□□ -1.07
SLIRP-204ENST00000555890 MYL6BP14649 208 aa8.37□□□□□ -1.07
SLIRP-204ENST00000555890 EPS15P42566 896 aa8.37□□□□□ -1.07
SLIRP-204ENST00000555890 PPP4R3BQ5MIZ7 849 aa8.37□□□□□ -1.07
SLIRP-204ENST00000555890 PACS2Q86VP3 889 aa8.37□□□□□ -1.07
SLIRP-204ENST00000555890 C2orf69Q8N8R5 385 aa8.37□□□□□ -1.07
SLIRP-204ENST00000555890 LINS1Q8NG48 757 aa8.37□□□□□ -1.07
SLIRP-204ENST00000555890 MYLIPQ8WY64 445 aa8.37□□□□□ -1.07
SLIRP-204ENST00000555890 TATDN2Q93075 761 aa8.37□□□□□ -1.07
SLIRP-204ENST00000555890 IPO9Q96P70 1041 aaKnown RBP8.37□□□□□ -1.07
SLIRP-204ENST00000555890 TEX13AQ9BXU3 409 aaPredicted RBP8.37□□□□□ -1.07
SLIRP-204ENST00000555890 C9orf78Q9NZ63 289 aaPredicted RBP8.37□□□□□ -1.07
SLIRP-204ENST00000555890 NARFQ9UHQ1 456 aa8.37□□□□□ -1.07
SLIRP-204ENST00000555890 USP16Q9Y5T5 823 aa8.37□□□□□ -1.07
SLIRP-204ENST00000555890 LRRFIP2Q9Y608 721 aaKnown RBP8.37□□□□□ -1.07
SLIRP-204ENST00000555890 C5orf42Q9H799 3197 aa8.37□□□□□ -1.07
SLIRP-204ENST00000555890 FDX1P10109 184 aa8.36□□□□□ -1.07
SLIRP-204ENST00000555890 MRPS5P82675 430 aaKnown RBP8.36□□□□□ -1.07
SLIRP-204ENST00000555890 AIMP1Q12904 312 aaKnown RBP8.36□□□□□ -1.07
SLIRP-204ENST00000555890 PROSER3Q2NL68 480 aa8.36□□□□□ -1.07
SLIRP-204ENST00000555890 ARSIQ5FYB1 569 aa8.36□□□□□ -1.07
SLIRP-204ENST00000555890 FOXD4L5Q5VV16 416 aaPredicted RBP8.36□□□□□ -1.07
SLIRP-204ENST00000555890 XAGE3Q8WTP9 111 aa8.36□□□□□ -1.07
SLIRP-204ENST00000555890 FOXD4L4Q8WXT5 416 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms