RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, human

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACTN1-215	ENST00000555616	FPGT-TNNI3K	V9GXZ4	949 aa		11.82	□□□□□ -0.52
ACTN1-215	ENST00000555616	GAK	O14976	1311 aa		11.82	□□□□□ -0.52
ACTN1-215	ENST00000555616	CACNB3	P54284	484 aa		11.81	□□□□□ -0.52
ACTN1-215	ENST00000555616	OS9	Q13438	667 aa	Predicted RBP	11.81	□□□□□ -0.52
ACTN1-215	ENST00000555616	PRKG1	Q13976	671 aa		11.81	□□□□□ -0.52
ACTN1-215	ENST00000555616	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.81	□□□□□ -0.52
ACTN1-215	ENST00000555616	NEUROD6	Q96NK8	337 aa		11.81	□□□□□ -0.52
ACTN1-215	ENST00000555616	TMEM39B	Q9GZU3	492 aa		11.81	□□□□□ -0.52
ACTN1-215	ENST00000555616	HMG20B	Q9P0W2	317 aa		11.81	□□□□□ -0.52
ACTN1-215	ENST00000555616	FZD1	Q9UP38	647 aa		11.81	□□□□□ -0.52
ACTN1-215	ENST00000555616	OTOF	Q9HC10	1997 aa		11.81	□□□□□ -0.52
ACTN1-215	ENST00000555616	LAMB1	P07942	1786 aa		11.8	□□□□□ -0.52
ACTN1-215	ENST00000555616	UQCRFS1P1	P0C7P4	283 aa		11.8	□□□□□ -0.52
ACTN1-215	ENST00000555616	IREB2	P48200	963 aa	Known RBP	11.8	□□□□□ -0.52
ACTN1-215	ENST00000555616	GORAB	Q5T7V8	394 aa		11.8	□□□□□ -0.52
ACTN1-215	ENST00000555616	SPRYD7	Q5W111	196 aa		11.8	□□□□□ -0.52
ACTN1-215	ENST00000555616	PI16	Q6UXB8	463 aa		11.8	□□□□□ -0.52
ACTN1-215	ENST00000555616	DZIP1	Q86YF9	867 aa	Known RBP	11.8	□□□□□ -0.52
ACTN1-215	ENST00000555616	SPATA5	Q8NB90	893 aa		11.8	□□□□□ -0.52
ACTN1-215	ENST00000555616	CSRNP1	Q96S65	589 aa		11.8	□□□□□ -0.52
ACTN1-215	ENST00000555616	TSKS	Q9UJT2	592 aa		11.8	□□□□□ -0.52
ACTN1-215	ENST00000555616	MAST2	Q6P0Q8	1798 aa		11.79	□□□□□ -0.52
ACTN1-215	ENST00000555616	USP2	O75604	605 aa	Predicted RBP	11.79	□□□□□ -0.52
ACTN1-215	ENST00000555616	ZBTB48	P10074	688 aa	Predicted RBP	11.79	□□□□□ -0.52
ACTN1-215	ENST00000555616	MCAM	P43121	646 aa		11.79	□□□□□ -0.52
ACTN1-215	ENST00000555616	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.79	□□□□□ -0.52
ACTN1-215	ENST00000555616	CDC42EP5	Q6NZY7	148 aa		11.79	□□□□□ -0.52
ACTN1-215	ENST00000555616	ANKRD13A	Q8IZ07	590 aa		11.79	□□□□□ -0.52
ACTN1-215	ENST00000555616	FAM163A	Q96GL9	167 aa	Predicted RBP	11.79	□□□□□ -0.52
ACTN1-215	ENST00000555616	CLMN	Q96JQ2	1002 aa		11.79	□□□□□ -0.52
ACTN1-215	ENST00000555616	ZNF512B	Q96KM6	892 aa	Predicted RBP	11.79	□□□□□ -0.52
ACTN1-215	ENST00000555616	DBNDD2	Q9BQY9	259 aa		11.79	□□□□□ -0.52
ACTN1-215	ENST00000555616	RNF186	Q9NXI6	227 aa		11.79	□□□□□ -0.52
ACTN1-215	ENST00000555616	ABCF2	Q9UG63	623 aa		11.79	□□□□□ -0.52
ACTN1-215	ENST00000555616	CAPN15	O75808	1086 aa		11.78	□□□□□ -0.52
ACTN1-215	ENST00000555616	SREBF2	Q12772	1141 aa		11.78	□□□□□ -0.52
ACTN1-215	ENST00000555616	ERC1	Q8IUD2	1116 aa		11.78	□□□□□ -0.52
ACTN1-215	ENST00000555616	SLF2	Q8IX21	1173 aa		11.78	□□□□□ -0.52
ACTN1-215	ENST00000555616	SIRT2	Q8IXJ6	389 aa		11.78	□□□□□ -0.52
ACTN1-215	ENST00000555616	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	11.78	□□□□□ -0.52
ACTN1-215	ENST00000555616	ZNF384	Q8TF68	577 aa		11.78	□□□□□ -0.52
ACTN1-215	ENST00000555616	GCC1	Q96CN9	775 aa		11.78	□□□□□ -0.52
ACTN1-215	ENST00000555616	HOOK2	Q96ED9	719 aa		11.78	□□□□□ -0.52
ACTN1-215	ENST00000555616	WNK4	Q96J92	1243 aa		11.78	□□□□□ -0.52
ACTN1-215	ENST00000555616	TLR7	Q9NYK1	1049 aa	Known RBP	11.78	□□□□□ -0.52
ACTN1-215	ENST00000555616	DBNL	Q9UJU6	430 aa	Known RBP	11.78	□□□□□ -0.52
ACTN1-215	ENST00000555616	EXOC6B	Q9Y2D4	811 aa		11.78	□□□□□ -0.52
ACTN1-215	ENST00000555616	MROH7-TTC4	A0A0A0MT08	1334 aa		11.78	□□□□□ -0.52
ACTN1-215	ENST00000555616	IGHD	P01880	384 aa		11.77	□□□□□ -0.53
ACTN1-215	ENST00000555616	TM4SF4	P48230	202 aa		11.77	□□□□□ -0.53
ACTN1-215	ENST00000555616	MECOM	Q03112	1051 aa		11.77	□□□□□ -0.53
ACTN1-215	ENST00000555616	NFIA	Q12857	509 aa		11.77	□□□□□ -0.53
ACTN1-215	ENST00000555616	HSP90AB4P	Q58FF6	505 aa		11.77	□□□□□ -0.53
ACTN1-215	ENST00000555616	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	11.77	□□□□□ -0.53
ACTN1-215	ENST00000555616	FAM151A	Q8WW52	585 aa		11.77	□□□□□ -0.53
ACTN1-215	ENST00000555616	EAF2	Q96CJ1	260 aa	Predicted RBP	11.77	□□□□□ -0.53
ACTN1-215	ENST00000555616	SLC10A4	Q96EP9	437 aa		11.77	□□□□□ -0.53
ACTN1-215	ENST00000555616	IDI2	Q9BXS1	227 aa		11.77	□□□□□ -0.53
ACTN1-215	ENST00000555616	FAM198A	Q9UFP1	575 aa		11.77	□□□□□ -0.53
ACTN1-215	ENST00000555616	ATRNL1	Q5VV63	1379 aa		11.77	□□□□□ -0.53
ACTN1-215	ENST00000555616	IGSF3	O75054	1194 aa		11.76	□□□□□ -0.53
ACTN1-215	ENST00000555616	TRPA1	O75762	1119 aa		11.76	□□□□□ -0.53
ACTN1-215	ENST00000555616	MKRN3	Q13064	507 aa	Known RBP	11.76	□□□□□ -0.53
ACTN1-215	ENST00000555616	VGLL4	Q14135	290 aa		11.76	□□□□□ -0.53
ACTN1-215	ENST00000555616	CCDC158	Q5M9N0	1113 aa		11.76	□□□□□ -0.53
ACTN1-215	ENST00000555616	TTC39A	Q5SRH9	613 aa		11.76	□□□□□ -0.53
ACTN1-215	ENST00000555616	TBC1D9	Q6ZT07	1266 aa		11.76	□□□□□ -0.53
ACTN1-215	ENST00000555616	ERICH6	Q7L0X2	663 aa		11.76	□□□□□ -0.53
ACTN1-215	ENST00000555616	NSUN4	Q96CB9	384 aa	Known RBP	11.76	□□□□□ -0.53
ACTN1-215	ENST00000555616	CFHR5	Q9BXR6	569 aa		11.76	□□□□□ -0.53
ACTN1-215	ENST00000555616	DCTPP1	Q9H773	170 aa		11.76	□□□□□ -0.53
ACTN1-215	ENST00000555616	USP40	Q9NVE5	1235 aa		11.76	□□□□□ -0.53
ACTN1-215	ENST00000555616	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.76	□□□□□ -0.53
ACTN1-215	ENST00000555616	COL2A1	P02458	1487 aa	Predicted RBP	11.76	□□□□□ -0.53
ACTN1-215	ENST00000555616	GPR75-ASB3	A0A0A6YYF3	556 aa		11.75	□□□□□ -0.53
ACTN1-215	ENST00000555616	MANSC4	A6NHS7	340 aa	Predicted RBP	11.75	□□□□□ -0.53
ACTN1-215	ENST00000555616	ENTPD3	O75355	529 aa		11.75	□□□□□ -0.53
ACTN1-215	ENST00000555616	WDHD1	O75717	1129 aa	Predicted RBP	11.75	□□□□□ -0.53
ACTN1-215	ENST00000555616	GJA5	P36382	358 aa		11.75	□□□□□ -0.53
ACTN1-215	ENST00000555616	BTD	P43251	543 aa		11.75	□□□□□ -0.53
ACTN1-215	ENST00000555616	RGS3	P49796	1198 aa		11.75	□□□□□ -0.53
ACTN1-215	ENST00000555616	RHBDL3	P58872	404 aa		11.75	□□□□□ -0.53
ACTN1-215	ENST00000555616	GSTO1	P78417	241 aa		11.75	□□□□□ -0.53
ACTN1-215	ENST00000555616	MAP3K9	P80192	1104 aa		11.75	□□□□□ -0.53
ACTN1-215	ENST00000555616	DCAF15	Q66K64	600 aa		11.75	□□□□□ -0.53
ACTN1-215	ENST00000555616	SMC5	Q8IY18	1101 aa		11.75	□□□□□ -0.53
ACTN1-215	ENST00000555616	SNCAIP	Q9Y6H5	919 aa		11.75	□□□□□ -0.53
ACTN1-215	ENST00000555616	AKAP11	Q9UKA4	1901 aa		11.74	□□□□□ -0.53
ACTN1-215	ENST00000555616	SPDYE5	A6NIY4	337 aa		11.74	□□□□□ -0.53
ACTN1-215	ENST00000555616	RAB11FIP3	O75154	756 aa		11.74	□□□□□ -0.53
ACTN1-215	ENST00000555616	NPM3	O75607	178 aa	Known RBP	11.74	□□□□□ -0.53
ACTN1-215	ENST00000555616	MAP4K4	O95819	1239 aa	Predicted RBP	11.74	□□□□□ -0.53
ACTN1-215	ENST00000555616	CYP2E1	P05181	493 aa	Predicted RBP	11.74	□□□□□ -0.53
ACTN1-215	ENST00000555616	LDHC	P07864	332 aa		11.74	□□□□□ -0.53
ACTN1-215	ENST00000555616	INHBE	P58166	350 aa		11.74	□□□□□ -0.53
ACTN1-215	ENST00000555616	TCP10	Q12799	353 aa		11.74	□□□□□ -0.53
ACTN1-215	ENST00000555616	NOM1	Q5C9Z4	860 aa	Known RBP	11.74	□□□□□ -0.53
ACTN1-215	ENST00000555616	AACS	Q86V21	672 aa		11.74	□□□□□ -0.53
ACTN1-215	ENST00000555616	RHPN1	Q8TCX5	695 aa		11.74	□□□□□ -0.53
ACTN1-215	ENST00000555616	OPTN	Q96CV9	577 aa		11.74	□□□□□ -0.53

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