RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 CDC42EP5Q6NZY7 148 aa17.07■□□□□ 0.32
PCNX4-209ENST00000555569 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.07■□□□□ 0.32
PCNX4-209ENST00000555569 CTU1Q7Z7A3 348 aaKnown RBP17.07■□□□□ 0.32
PCNX4-209ENST00000555569 ITPRIPQ8IWB1 547 aa17.07■□□□□ 0.32
PCNX4-209ENST00000555569 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.07■□□□□ 0.32
PCNX4-209ENST00000555569 HOOK2Q96ED9 719 aa17.07■□□□□ 0.32
PCNX4-209ENST00000555569 NEUROD6Q96NK8 337 aa17.07■□□□□ 0.32
PCNX4-209ENST00000555569 CFHR5Q9BXR6 569 aa17.07■□□□□ 0.32
PCNX4-209ENST00000555569 GPR25O00155 361 aa17.06■□□□□ 0.32
PCNX4-209ENST00000555569 ATP8B2P98198 1209 aa17.06■□□□□ 0.32
PCNX4-209ENST00000555569 POLA2Q14181 598 aa17.06■□□□□ 0.32
PCNX4-209ENST00000555569 IFNL1Q8IU54 200 aa17.06■□□□□ 0.32
PCNX4-209ENST00000555569 ZNF296Q8WUU4 475 aaPredicted RBP17.06■□□□□ 0.32
PCNX4-209ENST00000555569 OPTNQ96CV9 577 aa17.06■□□□□ 0.32
PCNX4-209ENST00000555569 CSADQ9Y600 493 aa17.06■□□□□ 0.32
PCNX4-209ENST00000555569 IGF2BP3O00425 579 aaKnown RBP eCLIP17.05■□□□□ 0.32
PCNX4-209ENST00000555569 VGLL4Q14135 290 aa17.05■□□□□ 0.32
PCNX4-209ENST00000555569 GORABQ5T7V8 394 aa17.05■□□□□ 0.32
PCNX4-209ENST00000555569 FAM151AQ8WW52 585 aa17.05■□□□□ 0.32
PCNX4-209ENST00000555569 C1orf115Q9H7X2 142 aa17.05■□□□□ 0.32
PCNX4-209ENST00000555569 ABCF2Q9UG63 623 aa17.05■□□□□ 0.32
PCNX4-209ENST00000555569 ZBTB7BO15156 539 aaPredicted RBP17.04■□□□□ 0.32
PCNX4-209ENST00000555569 DCAF15Q66K64 600 aa17.04■□□□□ 0.32
PCNX4-209ENST00000555569 SPTY2D1Q68D10 685 aaPredicted RBP17.04■□□□□ 0.32
PCNX4-209ENST00000555569 DZIP1Q86YF9 867 aaKnown RBP17.04■□□□□ 0.32
PCNX4-209ENST00000555569 SSH3Q8TE77 659 aa17.04■□□□□ 0.32
PCNX4-209ENST00000555569 R3HDMLQ9H3Y0 253 aa17.04■□□□□ 0.32
PCNX4-209ENST00000555569 USP40Q9NVE5 1235 aa17.04■□□□□ 0.32
PCNX4-209ENST00000555569 GAKO14976 1311 aa17.03■□□□□ 0.32
PCNX4-209ENST00000555569 FKTNO75072 461 aa17.03■□□□□ 0.32
PCNX4-209ENST00000555569 TCP10Q12799 353 aa17.03■□□□□ 0.32
PCNX4-209ENST00000555569 NFIAQ12857 509 aa17.03■□□□□ 0.32
PCNX4-209ENST00000555569 OS9Q13438 667 aaPredicted RBP17.03■□□□□ 0.32
PCNX4-209ENST00000555569 OTUD7BQ6GQQ9 843 aa17.03■□□□□ 0.32
PCNX4-209ENST00000555569 SLF2Q8IX21 1173 aa17.03■□□□□ 0.32
PCNX4-209ENST00000555569 CNKSR2Q8WXI2 1034 aa17.03■□□□□ 0.32
PCNX4-209ENST00000555569 WRNIP1Q96S55 665 aa17.03■□□□□ 0.32
PCNX4-209ENST00000555569 TESPA1A2RU30 521 aaPredicted RBP17.02■□□□□ 0.32
PCNX4-209ENST00000555569 ARID4AP29374 1257 aaPredicted RBP17.02■□□□□ 0.32
PCNX4-209ENST00000555569 ERICH6Q7L0X2 663 aa17.02■□□□□ 0.32
PCNX4-209ENST00000555569 MS4A4AQ96JQ5 239 aa17.02■□□□□ 0.32
PCNX4-209ENST00000555569 ZNF341Q9BYN7 854 aa17.02■□□□□ 0.32
PCNX4-209ENST00000555569 GPR108Q9NPR9 543 aa17.02■□□□□ 0.32
PCNX4-209ENST00000555569 HMG20BQ9P0W2 317 aa17.02■□□□□ 0.32
PCNX4-209ENST00000555569 FAM198AQ9UFP1 575 aa17.02■□□□□ 0.32
PCNX4-209ENST00000555569 SPDYE5A6NIY4 337 aa17.01■□□□□ 0.31
PCNX4-209ENST00000555569 SURF6O75683 361 aaKnown RBP17.01■□□□□ 0.31
PCNX4-209ENST00000555569 UQCRFS1P1P0C7P4 283 aa17.01■□□□□ 0.31
PCNX4-209ENST00000555569 GTF2A2P52657 109 aa17.01■□□□□ 0.31
PCNX4-209ENST00000555569 PKN2Q16513 984 aaKnown RBP17.01■□□□□ 0.31
PCNX4-209ENST00000555569 MIGA2Q7L4E1 593 aa17.01■□□□□ 0.31
PCNX4-209ENST00000555569 SPATA5Q8NB90 893 aa17.01■□□□□ 0.31
PCNX4-209ENST00000555569 OTUD5Q96G74 571 aa17.01■□□□□ 0.31
PCNX4-209ENST00000555569 FAM163AQ96GL9 167 aaPredicted RBP17.01■□□□□ 0.31
PCNX4-209ENST00000555569 PTPN18Q99952 460 aa17.01■□□□□ 0.31
PCNX4-209ENST00000555569 SNCAIPQ9Y6H5 919 aa17.01■□□□□ 0.31
PCNX4-209ENST00000555569 DOCK2Q92608 1830 aa17■□□□□ 0.31
PCNX4-209ENST00000555569 MROH7-TTC4A0A0A0MT08 1334 aa17■□□□□ 0.31
PCNX4-209ENST00000555569 MAPK8IP2Q13387 824 aaPredicted RBP17■□□□□ 0.31
PCNX4-209ENST00000555569 TNNI3KQ59H18 835 aa17■□□□□ 0.31
PCNX4-209ENST00000555569 PI16Q6UXB8 463 aa17■□□□□ 0.31
PCNX4-209ENST00000555569 ERO1BQ86YB8 467 aa17■□□□□ 0.31
PCNX4-209ENST00000555569 PANK1Q8TE04 598 aa17■□□□□ 0.31
PCNX4-209ENST00000555569 ZKSCAN4Q969J2 545 aaPredicted RBP17■□□□□ 0.31
PCNX4-209ENST00000555569 FPGT-TNNI3KV9GXZ4 949 aa17■□□□□ 0.31
PCNX4-209ENST00000555569 CCL15-CCL14A0A0B4J2E2 113 aa16.99■□□□□ 0.31
PCNX4-209ENST00000555569 MS4A1P11836 297 aa16.99■□□□□ 0.31
PCNX4-209ENST00000555569 MCAMP43121 646 aa16.99■□□□□ 0.31
PCNX4-209ENST00000555569 RGS3P49796 1198 aa16.99■□□□□ 0.31
PCNX4-209ENST00000555569 MECOMQ03112 1051 aa16.99■□□□□ 0.31
PCNX4-209ENST00000555569 CRHR2Q13324 411 aa16.99■□□□□ 0.31
PCNX4-209ENST00000555569 CCL15Q16663 113 aa16.99■□□□□ 0.31
PCNX4-209ENST00000555569 ZFPM1Q8IX07 1006 aa16.99■□□□□ 0.31
PCNX4-209ENST00000555569 BRI3BPQ8WY22 251 aa16.99■□□□□ 0.31
PCNX4-209ENST00000555569 IDI2Q9BXS1 227 aa16.99■□□□□ 0.31
PCNX4-209ENST00000555569 NOP58Q9Y2X3 529 aaKnown RBP16.99■□□□□ 0.31
PCNX4-209ENST00000555569 ENTPD3O75355 529 aa16.98■□□□□ 0.31
PCNX4-209ENST00000555569 INPP5BP32019 993 aa16.98■□□□□ 0.31
PCNX4-209ENST00000555569 BTDP43251 543 aa16.98■□□□□ 0.31
PCNX4-209ENST00000555569 RGS19P49795 217 aa16.98■□□□□ 0.31
PCNX4-209ENST00000555569 TTC39AQ5SRH9 613 aa16.98■□□□□ 0.31
PCNX4-209ENST00000555569 CEP85Q6P2H3 762 aa16.98■□□□□ 0.31
PCNX4-209ENST00000555569 TBC1D9Q6ZT07 1266 aa16.98■□□□□ 0.31
PCNX4-209ENST00000555569 ZNF384Q8TF68 577 aa16.98■□□□□ 0.31
PCNX4-209ENST00000555569 DBNDD2Q9BQY9 259 aa16.98■□□□□ 0.31
PCNX4-209ENST00000555569 ZNF112Q9UJU3 913 aa16.98■□□□□ 0.31
PCNX4-209ENST00000555569 RFX7Q2KHR2 1363 aa16.98■□□□□ 0.31
PCNX4-209ENST00000555569 GPR75-ASB3A0A0A6YYF3 556 aa16.97■□□□□ 0.31
PCNX4-209ENST00000555569 LDHCP07864 332 aa16.97■□□□□ 0.31
PCNX4-209ENST00000555569 GSTO1P78417 241 aa16.97■□□□□ 0.31
PCNX4-209ENST00000555569 PPIL2Q13356 520 aa16.97■□□□□ 0.31
PCNX4-209ENST00000555569 CCDC158Q5M9N0 1113 aa16.97■□□□□ 0.31
PCNX4-209ENST00000555569 NSUN4Q96CB9 384 aaKnown RBP16.97■□□□□ 0.31
PCNX4-209ENST00000555569 RAI14Q9P0K7 980 aa16.97■□□□□ 0.31
PCNX4-209ENST00000555569 IRF6O14896 467 aa16.96■□□□□ 0.31
PCNX4-209ENST00000555569 WDHD1O75717 1129 aaPredicted RBP16.96■□□□□ 0.31
PCNX4-209ENST00000555569 CETPP11597 493 aa16.96■□□□□ 0.31
PCNX4-209ENST00000555569 SNAPC2Q13487 334 aa16.96■□□□□ 0.31
PCNX4-209ENST00000555569 TAF1CQ15572 869 aaPredicted RBP16.96■□□□□ 0.31
PCNX4-209ENST00000555569 FBXO46Q6PJ61 603 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms