RNA–Protein interactions for RNA: ENST00000555382.5

PRKCH-215, Transcript of protein kinase C eta, human

TSL 3

Gene PRKCH, Length 691 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-215	ENST00000555382	NUCB1	Q02818	461 aa		11.8	□□□□□ -0.52
PRKCH-215	ENST00000555382	OS9	Q13438	667 aa	Predicted RBP	11.8	□□□□□ -0.52
PRKCH-215	ENST00000555382	KIAA0825	Q8IV33	1275 aa		11.8	□□□□□ -0.52
PRKCH-215	ENST00000555382	CLASRP	Q8N2M8	674 aa	Known RBP	11.8	□□□□□ -0.52
PRKCH-215	ENST00000555382	SLC10A4	Q96EP9	437 aa		11.8	□□□□□ -0.52
PRKCH-215	ENST00000555382	MS4A4A	Q96JQ5	239 aa		11.8	□□□□□ -0.52
PRKCH-215	ENST00000555382	SIL1	Q9H173	461 aa		11.8	□□□□□ -0.52
PRKCH-215	ENST00000555382	PPP2R3B	Q9Y5P8	575 aa		11.8	□□□□□ -0.52
PRKCH-215	ENST00000555382	VCAN	P13611	3396 aa		11.79	□□□□□ -0.52
PRKCH-215	ENST00000555382	SP3	Q02447	781 aa		11.79	□□□□□ -0.52
PRKCH-215	ENST00000555382	TNNI3K	Q59H18	835 aa		11.79	□□□□□ -0.52
PRKCH-215	ENST00000555382	UBE2Q1	Q7Z7E8	422 aa		11.79	□□□□□ -0.52
PRKCH-215	ENST00000555382	SHISA4	Q96DD7	197 aa		11.79	□□□□□ -0.52
PRKCH-215	ENST00000555382	ZNF512B	Q96KM6	892 aa	Predicted RBP	11.79	□□□□□ -0.52
PRKCH-215	ENST00000555382	PTCH2	Q9Y6C5	1203 aa		11.79	□□□□□ -0.52
PRKCH-215	ENST00000555382	FPGT-TNNI3K	V9GXZ4	949 aa		11.79	□□□□□ -0.52
PRKCH-215	ENST00000555382	IGSF3	O75054	1194 aa		11.78	□□□□□ -0.52
PRKCH-215	ENST00000555382	USP2	O75604	605 aa	Predicted RBP	11.78	□□□□□ -0.52
PRKCH-215	ENST00000555382	IFIT1	P09914	478 aa	Known RBP	11.78	□□□□□ -0.52
PRKCH-215	ENST00000555382	SLC5A1	P13866	664 aa		11.78	□□□□□ -0.52
PRKCH-215	ENST00000555382	TFCP2	Q12800	502 aa		11.78	□□□□□ -0.52
PRKCH-215	ENST00000555382	ATP2B3	Q16720	1220 aa		11.78	□□□□□ -0.52
PRKCH-215	ENST00000555382	NBPF12	Q5TAG4	269 aa	Predicted RBP	11.78	□□□□□ -0.52
PRKCH-215	ENST00000555382	TTLL5	Q6EMB2	1281 aa		11.78	□□□□□ -0.52
PRKCH-215	ENST00000555382	SPDYE2B	A6NHP3	402 aa		11.77	□□□□□ -0.53
PRKCH-215	ENST00000555382	SPDYE6	P0CI01	402 aa		11.77	□□□□□ -0.53
PRKCH-215	ENST00000555382	FBXO33	Q7Z6M2	555 aa		11.77	□□□□□ -0.53
PRKCH-215	ENST00000555382	CHD1L	Q86WJ1	897 aa		11.77	□□□□□ -0.53
PRKCH-215	ENST00000555382	BRI3BP	Q8WY22	251 aa		11.77	□□□□□ -0.53
PRKCH-215	ENST00000555382	EAF2	Q96CJ1	260 aa	Predicted RBP	11.77	□□□□□ -0.53
PRKCH-215	ENST00000555382	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.77	□□□□□ -0.53
PRKCH-215	ENST00000555382	PDS5A	Q29RF7	1337 aa	Known RBP	11.77	□□□□□ -0.53
PRKCH-215	ENST00000555382	SPTBN5	Q9NRC6	3674 aa	Known RBP	11.76	□□□□□ -0.53
PRKCH-215	ENST00000555382	MYH13	Q9UKX3	1938 aa		11.76	□□□□□ -0.53
PRKCH-215	ENST00000555382		A0A1B0GUL7	405 aa		11.76	□□□□□ -0.53
PRKCH-215	ENST00000555382	SEMA3E	O15041	775 aa		11.76	□□□□□ -0.53
PRKCH-215	ENST00000555382	KCNJ4	P48050	445 aa		11.76	□□□□□ -0.53
PRKCH-215	ENST00000555382	GTF2I	P78347	998 aa		11.76	□□□□□ -0.53
PRKCH-215	ENST00000555382	TICAM2	Q86XR7	235 aa		11.76	□□□□□ -0.53
PRKCH-215	ENST00000555382	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
PRKCH-215	ENST00000555382	PRMT6	Q96LA8	375 aa	Predicted RBP	11.76	□□□□□ -0.53
PRKCH-215	ENST00000555382	TEPSIN	Q96N21	525 aa		11.76	□□□□□ -0.53
PRKCH-215	ENST00000555382	OSBPL3	Q9H4L5	887 aa		11.76	□□□□□ -0.53
PRKCH-215	ENST00000555382	RBM27	Q9P2N5	1060 aa	Known RBP	11.76	□□□□□ -0.53
PRKCH-215	ENST00000555382	STAP2	Q9UGK3	403 aa		11.76	□□□□□ -0.53
PRKCH-215	ENST00000555382	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	11.76	□□□□□ -0.53
PRKCH-215	ENST00000555382	LAMA2	P24043	3122 aa	Known RBP	11.75	□□□□□ -0.53
PRKCH-215	ENST00000555382	PPP1R12B	O60237	982 aa	Predicted RBP	11.75	□□□□□ -0.53
PRKCH-215	ENST00000555382	TAF5L	O75529	589 aa		11.75	□□□□□ -0.53
PRKCH-215	ENST00000555382	DLGAP5	Q15398	846 aa		11.75	□□□□□ -0.53
PRKCH-215	ENST00000555382	SLC9C1	Q4G0N8	1177 aa		11.75	□□□□□ -0.53
PRKCH-215	ENST00000555382	CAVIN4	Q5BKX8	364 aa		11.75	□□□□□ -0.53
PRKCH-215	ENST00000555382	ANKRD45	Q5TZF3	282 aa		11.75	□□□□□ -0.53
PRKCH-215	ENST00000555382	CHRDL2	Q6WN34	429 aa		11.75	□□□□□ -0.53
PRKCH-215	ENST00000555382	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	11.75	□□□□□ -0.53
PRKCH-215	ENST00000555382	CDAN1	Q8IWY9	1227 aa		11.75	□□□□□ -0.53
PRKCH-215	ENST00000555382	ANKRD13A	Q8IZ07	590 aa		11.75	□□□□□ -0.53
PRKCH-215	ENST00000555382	HELB	Q8NG08	1087 aa	Predicted RBP	11.75	□□□□□ -0.53
PRKCH-215	ENST00000555382	CNKSR2	Q8WXI2	1034 aa		11.75	□□□□□ -0.53
PRKCH-215	ENST00000555382	FBXW7	Q969H0	707 aa		11.75	□□□□□ -0.53
PRKCH-215	ENST00000555382	OPTN	Q96CV9	577 aa		11.75	□□□□□ -0.53
PRKCH-215	ENST00000555382	CD209	Q9NNX6	404 aa		11.75	□□□□□ -0.53
PRKCH-215	ENST00000555382	TTC41P	Q6P2S7	1318 aa		11.75	□□□□□ -0.53
PRKCH-215	ENST00000555382	SALL3	Q9BXA9	1300 aa		11.75	□□□□□ -0.53
PRKCH-215	ENST00000555382	CLRN2	A0PK11	232 aa		11.74	□□□□□ -0.53
PRKCH-215	ENST00000555382	SNAP23	O00161	211 aa		11.74	□□□□□ -0.53
PRKCH-215	ENST00000555382	IFIT2	P09913	472 aa	Known RBP	11.74	□□□□□ -0.53
PRKCH-215	ENST00000555382	UQCRFS1P1	P0C7P4	283 aa		11.74	□□□□□ -0.53
PRKCH-215	ENST00000555382	IL1R1	P14778	569 aa		11.74	□□□□□ -0.53
PRKCH-215	ENST00000555382	TIMM10	P62072	90 aa		11.74	□□□□□ -0.53
PRKCH-215	ENST00000555382	RASA3	Q14644	834 aa		11.74	□□□□□ -0.53
PRKCH-215	ENST00000555382	SUPT20HL1	Q3ZLR7	823 aa		11.74	□□□□□ -0.53
PRKCH-215	ENST00000555382	ZNF804A	Q7Z570	1209 aa		11.74	□□□□□ -0.53
PRKCH-215	ENST00000555382	AACS	Q86V21	672 aa		11.74	□□□□□ -0.53
PRKCH-215	ENST00000555382	FAM43A	Q8N2R8	423 aa		11.74	□□□□□ -0.53
PRKCH-215	ENST00000555382	XAGE2	Q96GT9	111 aa		11.74	□□□□□ -0.53
PRKCH-215	ENST00000555382	FAM84B	Q96KN1	310 aa	Predicted RBP	11.74	□□□□□ -0.53
PRKCH-215	ENST00000555382	TMEM106C	Q9BVX2	250 aa		11.74	□□□□□ -0.53
PRKCH-215	ENST00000555382	ARHGAP39	Q9C0H5	1083 aa		11.74	□□□□□ -0.53
PRKCH-215	ENST00000555382	DBNL	Q9UJU6	430 aa	Known RBP	11.74	□□□□□ -0.53
PRKCH-215	ENST00000555382	ATP5J	P18859	108 aa		11.73	□□□□□ -0.53
PRKCH-215	ENST00000555382	ARID4A	P29374	1257 aa	Predicted RBP	11.73	□□□□□ -0.53
PRKCH-215	ENST00000555382	HIBADH	P31937	336 aa	Known RBP	11.73	□□□□□ -0.53
PRKCH-215	ENST00000555382	IREB2	P48200	963 aa	Known RBP	11.73	□□□□□ -0.53
PRKCH-215	ENST00000555382	FKBP1A	P62942	108 aa	Known RBP	11.73	□□□□□ -0.53
PRKCH-215	ENST00000555382	CFAP100	Q494V2	611 aa		11.73	□□□□□ -0.53
PRKCH-215	ENST00000555382	EYS	Q5T1H1	3165 aa		11.73	□□□□□ -0.53
PRKCH-215	ENST00000555382	OTUD7B	Q6GQQ9	843 aa		11.73	□□□□□ -0.53
PRKCH-215	ENST00000555382	B4GALNT3	Q6L9W6	998 aa		11.73	□□□□□ -0.53
PRKCH-215	ENST00000555382	TMED8	Q6PL24	325 aa	Predicted RBP	11.73	□□□□□ -0.53
PRKCH-215	ENST00000555382	TDRD7	Q8NHU6	1098 aa	Known RBP	11.73	□□□□□ -0.53
PRKCH-215	ENST00000555382	SH3TC2	Q8TF17	1288 aa		11.73	□□□□□ -0.53
PRKCH-215	ENST00000555382	GPATCH3	Q96I76	525 aa		11.73	□□□□□ -0.53
PRKCH-215	ENST00000555382	IL1RAPL2	Q9NP60	686 aa		11.73	□□□□□ -0.53
PRKCH-215	ENST00000555382	GNL3L	Q9NVN8	582 aa	Known RBP	11.73	□□□□□ -0.53
PRKCH-215	ENST00000555382	FAM205A	Q6ZU69	1335 aa		11.72	□□□□□ -0.53
PRKCH-215	ENST00000555382	ADGRA2	Q96PE1	1338 aa		11.72	□□□□□ -0.53
PRKCH-215	ENST00000555382	CTGF	P29279	349 aa		11.72	□□□□□ -0.53
PRKCH-215	ENST00000555382	VGLL4	Q14135	290 aa		11.72	□□□□□ -0.53
PRKCH-215	ENST00000555382	SPDYE2	Q495Y8	402 aa		11.72	□□□□□ -0.53

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